Solea senegalensis (Senegalese sole): 122766849
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Entry
122766849 CDS
T07721
Name
(RefSeq) SH3 domain and tetratricopeptide repeat-containing protein 1 isoform X1
KO
K24313
SH3 domain and tetratricopeptide repeat-containing protein
Organism
ssen
Solea senegalensis (Senegalese sole)
Brite
KEGG Orthology (KO) [BR:
ssen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ssen04131
]
122766849
Membrane trafficking [BR:
ssen04131
]
Protein recycling
Rab GTPases and associated proteins
Rab11 associated proteins
122766849
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_12
TPR_1
TPR_2
TPR_NPHP3
TPR_10
TPR_7
SH3_1
TPR_8
SH3_9
SH3_2
TPR_11
Motif
Other DBs
NCBI-GeneID:
122766849
NCBI-ProteinID:
XP_043877983
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Position
LG3:complement(17333370..17368675)
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AA seq
1295 aa
AA seq
DB search
MDAVSEGKGTRQSTCEGNYPTALPLVLDVVQGPECRPADEDLQESLRGKLRILQVDSAEV
NALFTELSAHVTAINSEDKIIFVRFKTFEELWRFTTYYTVGFLGQCLENLLFDDKFWLKP
LEENVAIEVSIQEETLSLMHKGLLMQEGSLFAYCSANQMFDSSTSGRDLYLEQGDIAQFE
PPFLSSGWTVLCLNDGARGTAPKPSLEPVIPFHQWFLKSCAESILVGCGKPTCDFPLQFA
RGTCRATEEYVADVPDELSIAPGDRIIIVGLLVSCFDWFTGKKEATGEVGLVKTSLVKPS
TDINNSTDVFLEEEEGLFLSLQEDKLINDAIALFKKTSCNYKLDIISHQDFEQKASFSSS
SEDYTQQTDLKQNIHRILDQRKDSSSDFMNETMNGNLEELVLPTQAKDTLPPCFTVHPTV
EGNKNNTENFIPLFNFLEGQDSKVEFGVLYGQSSDVLTSSTFCGHSDEEELIAFLGVARE
TARKKQLFWSRTRLCFLLGKLCAGRSKFSQARVYFEEALSVPQECFRDFKLLASIYSNLA
AIYLLQKNTQSFCTVMERFGALLLGIPECLEILEDDLVLKYILKKAVLSHNNTAEARASY
LLAKHHWTCAEKVNAVPYIERVLVLAAEAQKTWRFSPSHGYLTLAQLYRELCLPYLSVSS
ARTASLQPSAKLSDCLNSMLLILDNFNKPYGITQQKASIPPQVAPFLHQALSFTTMVQEG
GSQYDVLRHQFTVCLCQLLYKHKMVEPAIHQMHNLINNSPPSQQAPISVPERNNALIWLA
WLHIDNKQPSVALEILDIVLSSMPEHCTTPQEGVVLNMRGVALGCMGNFQRAVESYQAAV
EICEEYEDLPKWAVAQANLGLLCLKAGAKALAERYLTEAVQLFSELDEEGHEANFITVLL
ELGQHYVKQQQLDYGKGCYEWALLLAINANILDCQLSATRSMCHLYECEIPDQVQCIIYR
EHQVQLLKCTGDRGQEGEALEAISQLYLTLGTARAYRTALDYTKSSLGVFIDLGHREKEA
YGWLQAGKIYHLLGQNELVDLYVQVAQDVARKTGDVAFILKFVEAAGDIFFNSCLDRDKA
ITFYRDLALPMSMKSSCLQTRLRLCNKLTEVMFSLKLYGEAVEFGHMALDISITQGDHLN
ERVAYHRLASLYHCLEQYELAEHFYLKTLSHCPTPLQFDEETLYYVRVYQALGDIIFYDL
KDPFDAAGYYHLALAAAMDLGNKRSQLQLCTRLATIYHNFLIDRELSLFFYQKARGFAAE
LNVRRIDISPDQHYNSMPQYKTTREDHKKNKTFLG
NT seq
3888 nt
NT seq
+upstream
nt +downstream
nt
atggatgctgtcagtgaagggaagggaactcgtcaatcaacatgtgagggaaactaccca
acagctctgccgctggtgctggatgtggtgcagggtcctgagtgtcgtcctgcagatgaa
gacttacaggaatcgttgcgagggaaactccgcattctgcaggttgacagcgctgaggtc
aacgctctgtttacggagttgtctgctcatgtcaccgccatcaacagtgaagacaaaatt
atttttgtaagattcaaaacctttgaagaattatggaggtttacaacatattacacagta
ggtttcctcggtcagtgtttggaaaatcttttgtttgatgacaaattctggctgaagcct
ttggaggagaatgtcgctattgaggtttccattcaggaggaaacacttagtctgatgcac
aaaggcctcctcatgcaagaaggctcgctgtttgcttattgtagtgccaaccaaatgttc
gacagctctacctctggaagagacctgtacctggagcagggagacattgcacagtttgag
cctcccttcctgagctcaggttggactgtcctctgcctcaatgatggagctagaggcact
gcacccaaaccttctctggagcctgttattccttttcatcaatggtttctcaaatcctgt
gctgagagcattttagtcggatgtgggaaacctacctgtgactttcctctgcagtttgcc
agaggaacctgtcgagccacagaagagtatgttgctgatgtccctgatgagttgagcatt
gcacctggtgatcgcatcatcattgtgggactgctggtgtcttgttttgactggttcaca
gggaaaaaagaggccacaggagaagtgggtctggttaagacaagcctagtgaaaccgtcc
actgacattaataactcaacagatgtgtttttggaagaagaggaagggttgttcctcagt
ttgcaagaggacaaattaataaatgatgcaattgccttattcaagaagacatcttgtaac
tataaactggatatcatcagtcaccaagactttgaacagaaagcatcattcagctcttca
agtgaagattatactcagcagacagacctaaaacaaaatattcaccggattcttgatcaa
agaaaagactcatcatcggatttcatgaatgaaaccatgaatggaaatcttgaggagtta
gtcctgcccacacaggcaaaagacacactccctccatgtttcactgttcatccaactgta
gagggaaacaagaacaacactgagaacttcattcctctcttcaattttttggagggacaa
gacagcaaagtggagtttggtgtgttgtatggacagagttcagacgtcctcacttcctct
actttttgtggtcactccgacgaggaagagctgattgcctttctgggtgttgccagggaa
acagctaggaagaagcaactgttttggtcacggactcgtttgtgcttcctgttgggaaaa
ctctgtgctggcaggtcaaagttcagccaggctagggtttactttgaggaggcactcagt
gttccacaagaatgctttagggacttcaagctgttggccagcatctactccaacctagct
gccatatatcttttgcaaaaaaatacccaaagtttctgtactgtgatggagcggtttggt
gccttgctattaggaatcccagagtgcctagaaatattagaggatgatttagttcttaaa
tacattctcaagaaagcagtgctgtctcataacaacacagctgaggcccgggcttcatat
ctattagcaaagcaccactggacatgtgctgagaaggtgaatgccgttccatacattgag
agagtacttgttcttgctgctgaagcccaaaaaacatggaggttctctcccagccatgga
tacttgaccttggcacagctttacagggaactctgccttccctacctcagtgtcagttca
gcaaggacagcctctctacagccatctgccaaactgagtgactgtctcaacagtatgctc
ctcatcctggacaatttcaacaaaccgtatgggatcacacaacagaaagcctcaatccca
cctcaagtggcgccatttttacaccaagctctctcttttaccaccatggtccaagaagga
ggaagccagtacgatgttctgagacatcaatttacagtttgtctctgccaactcctttac
aagcacaaaatggttgaaccagccatccaccaaatgcataacctcatcaacaacagtcca
ccatcacagcaagcccccatctctgtaccagaaagaaacaatgccctcatctggctggca
tggcttcatattgacaacaagcagcccagtgttgcgttagagatattagacatagtcctg
tcttccatgccagaacactgcacgacccctcaagaaggtgtggtccttaacatgcgcggt
gtggcacttggatgtatgggcaatttccagagagcagtcgagagctaccaggctgctgtt
gaaatctgtgaagagtatgaggacctgccaaagtgggctgtagctcaggctaacctcggg
ctgttgtgtctgaaagctggagctaaagcactggcagaaaggtacctgactgaggccgtg
cagctcttctcagagctggatgaagaaggtcatgaggcaaacttcatcactgtgctgctt
gagctgggacagcactatgtgaagcagcagcagctggactatgggaaaggatgttatgag
tgggctctgttgctggcaatcaatgccaacattctagactgccaactctctgcaaccaga
agtatgtgccatctgtatgaatgtgagatcccagaccaggttcagtgtatcatctacagg
gaacaccaggtccagttattgaaatgcacaggagacagaggacaggaaggagaagcactg
gaggccattagtcagctctacctcactctgggaacagcaagggcataccgcacagctctt
gactatactaagagcagtctaggtgtcttcatcgacctgggccacagagagaaggaggca
tatggttggctgcaagctgggaagatttatcacctgctgggccaaaatgaactggtggac
ctttatgttcaggtagctcaggatgtcgcccgaaaaacaggagatgtcgctttcatcctg
aagtttgtggaagctgcaggagatattttcttcaacagctgcctggacagagacaaggcg
atcaccttctacagggaccttgctctgcccatgtcaatgaagagcagctgtcttcagacc
aggctcagattgtgtaataagctgactgaggtgatgttcagtctcaagttgtacggagaa
gctgttgagtttggacatatggcactggacatcagcatcactcaaggtgatcatctgaat
gaacgagtggcctaccaccgtctggcatctctgtaccactgtctagagcagtatgaactc
gctgaacacttctacttaaagaccctgagccactgtccaacacctctgcagtttgatgag
gaaacactctactatgtcagagtctaccaagccctaggggacatcatattctatgacctg
aaggacccatttgatgcagcaggctactaccatctggctcttgctgcagccatggatctg
ggcaacaaacgctctcagcttcagctgtgcacacgcctcgccaccatctaccacaatttc
ctcatagaccgagagctgtccctcttcttttaccagaaggccagaggatttgcagcagag
ctgaatgttagaagaatcgatatttcaccagatcagcactataacagcatgccacagtac
aagaccaccagagaagaccacaagaagaacaaaacatttttgggttaa
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