Solea senegalensis (Senegalese sole): 122766906
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Entry
122766906 CDS
T07721
Symbol
apex1
Name
(RefSeq) DNA-(apurinic or apyrimidinic site) endonuclease isoform X1
KO
K10771
AP endonuclease 1 [EC:
3.1.11.2
]
Organism
ssen
Solea senegalensis (Senegalese sole)
Pathway
ssen03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ssen00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
122766906 (apex1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ssen03400
]
122766906 (apex1)
Enzymes [BR:
ssen01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
122766906 (apex1)
DNA repair and recombination proteins [BR:
ssen03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
122766906 (apex1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_2
Motif
Other DBs
NCBI-GeneID:
122766906
NCBI-ProteinID:
XP_043878078
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All DBs
Position
LG3:complement(23372588..23375648)
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AA seq
311 aa
AA seq
DB search
MKRGKKAEEAATAEGENDTGSAPAKKGKSAKEPEAPILYDDPPDKMTSKDGREANTKITS
WNVDGLRAWVKKNGLDWVREENPDILCLQETKCAEKDLPANITSMPEYPHKYWASSNEKG
GYSGVAMLCKTEPLNVTYGIGKEEHDKEGRVITAEFPNFYLVTAYVPNSSKGLVRLDYRK
TWDEDFKMYLSELDIQKPVVLCGDLNVAHQEIDLKNPKGNKKNAGFTPEEREGFSQLLEA
GFVDSFRELYPEQTYAYTFWTYMMNSRAKNVGWRLDYFLLSSSLVPGLCDSKIRNKAMGS
DHCPITLHIAV
NT seq
936 nt
NT seq
+upstream
nt +downstream
nt
atgaagagaggcaagaaggcagaggaggcagctactgcagagggggagaacgacaccggc
tctgctcctgcaaagaaagggaagagtgctaaggaaccagaggccccgatactgtacgat
gatcctcctgacaaaatgacgagcaaagatggacgtgaagccaacacgaagatcacctcc
tggaatgtcgatggactgagggcctgggtgaaaaagaatggcctggattgggtacgtgag
gagaatccagatattttgtgcctacaagagacgaagtgtgcagagaaagacctccctgcc
aacatcacctcaatgcctgagtacccgcacaagtactgggctagctcaaatgaaaagggg
ggttacagcggtgtggccatgctctgcaagactgagcccctcaacgtgacctatggaatt
gggaaagaggagcacgacaaggagggccgggtcatcactgccgagttccccaacttctac
ctggtgaccgcctatgtgccaaattccagcaaaggcttggtgcgcttagattaccgtaaa
acctgggatgaggacttcaagatgtatctaagcgagctggacatccagaaacctgtggta
ctttgtggtgacctcaacgttgcacaccaggagatcgatcttaaaaaccccaaggggaac
aagaaaaatgcaggcttcacccccgaggagcgtgagggcttcagtcagcttctggaagca
ggattcgtcgacagcttccgcgagctttaccccgagcagacctatgcctacaccttctgg
acctacatgatgaattcccgtgcaaagaatgttggctggaggcttgattactttttgctt
tcatcctctttggtgccaggtttgtgcgacagcaagatccggaacaaggcaatgggaagc
gaccactgccccatcactctgcacattgctgtgtaa
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