Solea senegalensis (Senegalese sole): 122767022
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Entry
122767022 CDS
T07721
Symbol
rnf8
Name
(RefSeq) E3 ubiquitin-protein ligase rnf8 isoform X1
KO
K10667
E3 ubiquitin-protein ligase RNF8 [EC:
2.3.2.27
]
Organism
ssen
Solea senegalensis (Senegalese sole)
Brite
KEGG Orthology (KO) [BR:
ssen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ssen04121
]
122767022 (rnf8)
03400 DNA repair and recombination proteins [BR:
ssen03400
]
122767022 (rnf8)
Enzymes [BR:
ssen01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
122767022 (rnf8)
Ubiquitin system [BR:
ssen04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
122767022 (rnf8)
DNA repair and recombination proteins [BR:
ssen03400
]
Eukaryotic type
DSBR (double strand breaks repair)
Other DSBR factors
Ubiquitin ligases
122767022 (rnf8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FHA
zf-C3HC4_3
zf-C3HC4_2
zf-RING_2
zf-C3HC4
zf-RING_UBOX
zf-rbx1
zf-RING_5
zf-C3HC4_4
Yop-YscD_cpl
zf-ANAPC11
Prok-RING_4
zf-RING_6
RING_XB3-XBAT31
CYP38_PsbQ-like
zf-RING_10
Spectrin_Anc-1_2
Hydro_N_hd
TACC_C
Motif
Other DBs
NCBI-GeneID:
122767022
NCBI-ProteinID:
XP_043878289
LinkDB
All DBs
Position
LG3:24932562..24938958
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AA seq
531 aa
AA seq
DB search
MDGAVVGSSVAEEDECSDGSEALCLMRVGRNSDWLRLFENTEITIGRGVDVTYQLLSPSC
PLMISRLHCTIKQNTDGQWTVTDKKSLNGVWVNGKRIPAEEVHQLRLGDSIQLGVPLSGS
KVEFDYILAQRPLKDIKLCLAKEHKDGAKSAPVSKKSKRKLSMEEVEPSTSKPKLYRHST
ADKSFAKPCPLPQVKRQQRLSHSEPEKTGPSQQVQDVDQPFCGSSDPCDLDNLQMYSQNI
LLLREQVDDTQRQVASLEGQPRQADPLKEEQVKELQGQLETLRAKMHRMETLEKSFSETK
KQLEAEKTQQKEELLTKQLEEALQEQKKVIDELALSRQDFEEILLAKNKELEVTKEEKEK
ARAQKEEVVTQVTEVLENELQCIICSELFIEAVILGCAHSFCSHCIQQWRKKKDECPICR
RAIQSQTRCLALDNCIDSMVENLSLDMKARRQTLITQRKAANPAAVMVIDDEEEEEDDED
NSSTWSSDSDGSMVSIDSSLSSVVSVDGSIHLDSSPSYIGYSDESFDEFES
NT seq
1596 nt
NT seq
+upstream
nt +downstream
nt
atggatggtgcggtggtgggctcttctgttgccgaagaggacgagtgttcagacggctca
gaggctttatgtttgatgagagtcggtagaaattcagactggcttcggctgttcgaaaac
actgagatcactattggacgtggcgtggatgtcacctaccagctgctgtctccaagttgt
cctctcatgatctccaggttgcactgcactatcaagcagaatacagacggacagtggact
gtaacagacaagaagagcctcaatggtgtgtgggtgaatggaaaacgcattcctgctgaa
gaagtccatcagctcaggctcggagactccatccaacttggggttccattaagtggaagc
aaagtggaatttgactacatcctcgcccagcgtcccctcaaagacattaaactctgcctt
gcaaaggagcacaaagatggcgctaagtcagccccggtttctaagaagtccaagaggaag
ctgtccatggaagaagttgagccgtctacgtcaaagcccaagctgtaccgacattctacc
gccgacaagtcatttgcaaagccctgtcctctgccacaagtgaaacgtcaacagaggctc
agtcactcagaaccagagaaaactgggcccagccaacaagtccaggatgtagaccagcct
ttctgtggctccagtgatccttgtgacctggacaacctgcagatgtacagccagaacatt
ctgttgctgagggagcaggtggacgacacacagaggcaggtagcttctctggagggccag
ccccggcaggctgaccctctcaaagaagagcaggtgaaggagctgcagggtcagctggag
acgctccgagccaaaatgcaccggatggaaacgttggaaaaatccttcagtgaaaccaag
aagcagttggaggctgagaaaacgcagcaaaaggaggagcttttgacaaaacagctggaa
gaagccttgcaagagcaaaagaaagtaatagatgaactcgccctttctcggcaagacttt
gaagagattcttttagccaaaaacaaagaattggaagttacaaaggaggagaaagaaaaa
gcaagagcccaaaaagaagaagtggttacacaagtgactgaagttctggagaacgagctt
cagtgcatcatctgctcagagctcttcattgaggcagtgatcctgggctgtgctcacagc
ttctgttctcactgcatccagcagtggcgcaaaaagaaagacgagtgtcccatctgccga
cgggccatccagtcccagacccgctgtctggcgctggacaactgcatcgatagcatggtg
gaaaacctgagcctggacatgaaggcgagacgccaaaccctgatcacacagaggaaagca
gctaaccccgcggcggtgatggtgatcgatgatgaggaggaggaggaggacgacgaggac
aacagcagcacctggagcagcgacagtgacggcagcatggtgtccatcgacagcagcctg
agctctgtggtgtctgtggacggtagcatccatttggactctagcccttcgtacatcggt
tactcggatgagagctttgatgagtttgagagttaa
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integrated database retrieval system
