Solea senegalensis (Senegalese sole): 122767024
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Entry
122767024 CDS
T07721
Name
(RefSeq) transcription factor SOX-5-like isoform X1
KO
K09269
transcription factor SOX5/6/13 (SOX group D)
Organism
ssen
Solea senegalensis (Senegalese sole)
Brite
KEGG Orthology (KO) [BR:
ssen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ssen03000
]
122767024
Transcription factors [BR:
ssen03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
122767024
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
Motif
Other DBs
NCBI-GeneID:
122767024
NCBI-ProteinID:
XP_043878295
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Position
LG3:25008414..25030550
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AA seq
495 aa
AA seq
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MSRVKLLRCDIVWLSLGDPYPLQLIPTSMAAAAAATPGLGPLQLQVSLQQLYAAQLAAMQ
VSPGAKQHGGSLPPQTNLGTHSPPTNTHLQSDKSHSSPPPHKTKDSEGAQPLNLSAKPRA
SESKSPNSPPTSPQVNAAAAATKLGPASSLKQSIAPSSIGGPPTRVSSIADLLSSLSSTA
YLNDHEAVTKAFAEARQMKEQLKREQQVLDAKVAAVSNLSLNNGRTDKDKAALESLSQQL
KQQAEDKFNHAMLDFTMSGDSDGSPSVSDSRIFREARGRGGSSEPHIKRPMNAFMVWAKD
ERRKILQAFPDMHNSNISKILGSRWKAMTNLEKQPYYEEQARLSKQHLEKYPDYKYKPRP
KRTCLVDGKKLRIGEYKAIMRSRRQEMRQYFSMGQQSQLPLSSAGVVYPGALSMAGMPSP
QMPSEHSSMSSSPEPNANHHQNPQNLGLKGDEPRIKEELRLDDSNGDVYDDFDYEDEEVD
YASDHENHITQRDGM
NT seq
1488 nt
NT seq
+upstream
nt +downstream
nt
atgtctagagtaaagttactaagatgtgatattgtctggttgtctttaggtgacccctac
cctctccaacttatccccacatcaatggctgctgctgctgctgctacaccaggcctggga
ccactacagctccaggtgagcctacagcagttgtatgctgctcagctggcagccatgcag
gtttcccccggggccaagcagcacggaggcagcctgccaccccaaaccaacctgggcaca
cactcgccacccaccaacacacacctacagagtgacaagagccacagctccccaccacca
cacaagactaaggacagtgagggtgcacagccactgaacctgtcggccaagcctagggca
tccgagagcaagtcacccaactcccccccaacttccccacaggtcaatgctgctgctgct
gccaccaagctgggccctgccagttccttgaagcagagcatcgctccctccagcatcgga
ggaccaccaaccagagtcagctcaatagcagatttgttgtcctcgctgtcctcgacagcc
taccttaacgaccatgaggcggtgaccaaggccttcgccgaggcccgacagatgaaggaa
cagctgaagagagagcagcaggtcctggacgccaaggtggccgctgtcagtaacctcagc
ctcaacaatggacgcacagacaaggacaaggctgccttggagagtctgagtcagcagctg
aagcagcaggcggaggacaagttcaaccacgccatgctggacttcaccatgagtggagac
tctgacggctcccccagtgtgtcagactccagaatatttcgggaggcccggggtcgtggt
ggcagcagcgagcctcacattaaacggccaatgaacgccttcatggtctgggccaaggat
gagaggagaaagattctccaagccttccccgacatgcacaactccaacatcagcaagatc
ctcggctcacgctggaaagccatgaccaacctggagaagcagccgtactacgaggagcag
gctcgcctcagcaagcagcatctggaaaaatacccagactacaagtacaagccgcggccc
aaacgcacctgtctggtcgacggcaagaagctgcgtattggcgagtacaaagccatcatg
aggtcccgcagacaggaaatgagacaatatttcagtatggggcagcagagccagcttcct
ctgtcctcggcaggcgtcgtctaccctggtgccctgtccatggcgggaatgccttcaccc
cagatgccctctgagcattccagcatgtccagcagtcccgaacccaacgccaaccaccac
cagaacccccagaacctgggcctgaagggggacgagcctcgcatcaaggaggagctacgg
ctggacgacagcaacggtgacgtgtacgacgacttcgactacgaggatgaagaggttgat
tacgccagtgatcatgagaaccatatcacacaacgggacggcatgtga
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