Solea senegalensis (Senegalese sole): 122767116
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Entry
122767116 CDS
T07721
Symbol
frem1a
Name
(RefSeq) FRAS1-related extracellular matrix protein 1a isoform X1
KO
K23380
FRAS1-related extracelluar matrix protein 1/2
Organism
ssen
Solea senegalensis (Senegalese sole)
Pathway
ssen04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
ssen00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
122767116 (frem1a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04091 Lectins [BR:
ssen04091
]
122767116 (frem1a)
Lectins [BR:
ssen04091
]
C-Type lectins
Lecticans
122767116 (frem1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin_3
Frem_N
Cadherin_4
Lectin_C
Calx-beta
Motif
Other DBs
NCBI-GeneID:
122767116
NCBI-ProteinID:
XP_043878410
LinkDB
All DBs
Position
LG3:6175644..6203002
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AA seq
2182 aa
AA seq
DB search
MVSRSQTLAWTLLPVLLLGLTCSSHGSLVKVNKGLKVKRGQSAYLDEGDLQFHIPRQKDA
CKVEVVLNEPITQRVGRLVPQVFDCHYLTDEVKYVHNGCPLLKEDTVKLRLYRFTETETY
MEVFSLHVEIIEPECSIIRLGPKSLEVPEFYSLSDVVDGNVVSFRYERRSSLECSVHLIN
HNSHLPAHGQLVTGEPEKATKRGDEPESFIHLRQQLDNKARAMCKSEDCLKGLKRVKVNK
IPCDDFLSMGLRYQHIEPPSPDIDYIPIRLDLKDTRSGSIYQSEQAWIPVRIIGAMPNQP
PKPSFMSMFILEVDQFILTPLSTATLDAEDEETPKQLLVFNITRPPVDGFIAHLSDHTRP
ISSFTWLDLNDMLIGYQPPNSSHTQRRNYEVEFEVHDFFFEKSQPVTVHVSVRNADTNAP
RVSWNMGLSLLEGQSRPITWDQVQIVDNDNLNVVRIITVDGLQHGRLTVRGGKGFMFTVS
DIKAGVVRYHHDDSDSTKDFIIFRITDGRHQTRHKFPIKILPKDDSPPFLITNMLLEVSE
GQTALLRGSTLQASDMDSSDDYVLFNITRPPQAGELMKVPGPGLVGYPVNHFLQKDLFHS
LVYYRHLGNKVFDDSFEVVLSDFHDPPNLSEPQVVLVHIEPVPDQPPKEVPGSSRCLVIK
ETEVVHITRQELHFLDQECPDSELMYTVTTTPFYIGPHSTPDAGRLFLVDSIPKFTKDPN
APVLRLFTQHAVNFMKVAYMPPVTDIGPYPQYIQFILSVTNRLGKTVTGICFNITVTPED
NQPPQVFTNALSVDEGGESRLGPEHLLLSDVDSMEEALQVALQREPQHGVLQLGGLPLKP
GQAFTVQDLKSFKVSYHHDNSETVEDNIELTATDGTNSVGFVLQVKVKPVNDEVPVVVAG
LKPVLSCAEGEAAVITAEYIFALDADSDNSSLVFLIARQPYHGVVLRGGVVVDRFIQADV
TAGIVSYKHTGLEVGLTPRDDTITFVISDGETENSALCCGGRNPTRSGSTVRLRDSLPAY
DLHITVFPVDNQAPSLKTGDIFTVDEGGTVPITSSHLKASDVDTVLSELVVSLISPPQFG
YIENVLPSPGFEKSNMGVSIASFSYKDIMDGHVNYVQSRHQRMEPTADHFMLCVSDGKHS
SAHVPFYIIIDPTNDEIPEFMTRNITVREGETKQLDSSVLNAVDLDVPRNFLRFSIIKPP
QHGTIINDGSERPVNKRREAGPQSPVVDFTMTDLTNGMDLMYMHDDSENMEDTFTIQLTD
GRHQLHRQVTVKVLPVNDEEPRTIRNNGLEVEPGEMRLISSVALFAQDGDTPSSEVKYMF
ESVPTQGLLQLKEGQEWVTLTAGRNCTQEMVDMNLLRYVHTGLHATQTQDFFVFHLMDGK
NQSPPQHFHISVKELEKGNIAIFVKPANVSRGDRVVLTTDVLLATDGTEKPEELLYVITN
PPVHGHVEYIKHPGLAISTFSQMDIAANLVAYVHDNRASAPKETFQFVVSNGQTSRNGSF
EVTVEMVDRVLPSLSSNKGVTVPQDSSIILGPDSLALSDPDTPPGALTFTILQPPQYGRL
ILRDAVLTTRSNFTYRDIQEMKVSYKHGGGPSQIDRFAFTASDSTSRGFLLDGRLHVEPV
FFTIQIKPLDKSPPEVVKLLPLWKVEVLDNGRHGIFLSSLQLKAQDSDSREEELTFCIVR
PPYFGFLENITTGGFVPQCFSQMELNRRTIVYVVSGETESLSDSLEFTVSDPLGNTGSPR
VLEFSWSSVELSQAQLSACEEQGSVSLDIVRKGNLAESSYVTVQVKPVTAVGSKDFLVSP
SSLIQFDPGVSKRTWQIGIIQDHLEEAEEMFEVLLVSPEATLIGSISRAQVTIMDSGGQC
RLDRDREAPVLGGKEVKSDAYPQHGSIQLEKLPLGSESVVWARGDSIPRPASLPKKKIRV
TGNPKTIAPSSVFHNGTDIIFTYHGIMQMQVEDESSPSRKGRKANIRVVSRGPQLQASSA
LTDSKQEPKRRVSTTQKTGPAKGLATAEHSIPKPCVPELMGLLHFNQTANRLFHCNGVSW
KPWSPTDQMVKSQKCPRGWTFHSGHCYILSTEHKATWSTANRACRERYKGTLASVLSKVD
MDWLWDLTGRKPFWIGLNDREGRGHWEWAGGEPVSYTNWRKAPTRSKMKGGKKCVLVWRR
AKWQIRDCKTSRGHRFVCSVKT
NT seq
6549 nt
NT seq
+upstream
nt +downstream
nt
atggtgtcacggagtcagacgctggcctggacgttgcttccagtgcttctgctgggattg
acctgctcttcgcacggctccctggtgaaagtcaacaagggcttgaaggtcaaaagaggt
cagtcagcctaccttgatgagggcgacctgcagttccatatccctcgtcagaaggatgcg
tgcaaggtggaggtggtgttaaatgagcccataactcagcgagtgggaaggctcgtgcct
caggtgtttgactgccattatctgactgatgaagtgaagtatgtccataatggctgccca
ttgttgaaagaggacactgtcaagctccgactctacaggttcacagagacagagacatac
atggaggtgttttctctccatgtggaaattatagagcctgaatgcagcatcataaggctt
gggcctaaatccttggaggttcctgaattctatagcctctccgacgtagttgacggcaac
gtggtgtccttccgctatgagaggaggtctagcctggagtgcagcgtccatctgatcaac
cacaactcacacctgcccgcccatggccagctggtcactggagaaccagagaaagctacc
aagagaggggatgagccagagagcttcatccacctacgtcagcaactagataataaagcc
agggccatgtgtaaatctgaagactgcctgaagggcctaaagcgtgtgaaggtcaacaaa
atcccctgtgatgacttcttgtcgatgggactgaggtaccagcacatcgagcctccttct
ccagacatagactatatcccaataagactggacctcaaggacaccaggagtggcagcatc
tatcagtctgaacaggcatggattccagtgcggattattggtgcaatgcccaaccagcca
cccaaaccttccttcatgtccatgttcatcctggaagtggaccagttcatcctcactcca
ctctccactgctacactggatgccgaggatgaggaaacacccaaacagctcttggttttc
aacatcaccagaccccctgtggacggtttcatcgctcatctgtccgatcacactcgccca
atctcctccttcacttggctggacctcaatgacatgctcatcgggtatcaacctccaaac
tcctcacacactcagcgtaggaattacgaggtggagtttgaggtgcatgattttttcttt
gaaaaaagccaaccagttactgttcacgtgtctgtaaggaatgcagacacaaatgcacca
agagtttcctggaacatgggtctgagcctactggagggccagtcccgtccaataacgtgg
gaccaggtccagattgtggacaacgacaacctgaatgtcgtccgtatcatcacagtggat
ggtctgcagcatggacgtctcactgtcagaggcggaaagggcttcatgttcaccgtcagc
gacatcaaagcaggtgtcgttcgctatcaccacgacgacagcgactcgaccaaagacttc
attattttccgtatcaccgacggtcgccatcagaccaggcacaagttccccatcaagatc
ctgcctaaggatgacagtccccctttcctcatcaccaacatgctgctggaggtgtctgag
ggccagacggctctgctgaggggctccaccctgcaggcttcagatatggactccagtgac
gactacgtcctcttcaacatcacccgaccccctcaggctggagagctcatgaaagttccg
ggaccaggactcgtaggttaccccgttaaccactttcttcaaaaggacctgtttcattcc
ttggtttactaccgacaccttggaaacaaagtgtttgatgattcctttgaggtggtgctg
tctgatttccacgaccctcccaacctgtcagaacctcaagtggtgttggtgcacatagaa
cctgttccagaccaaccacctaaagaggttccgggttccagccgctgtctcgtaatcaaa
gaaacagaagtggtccacatcacacgacaggagctgcacttcctagaccaggagtgccca
gacagtgagctgatgtacacagtgaccaccacgcctttctacatcggtcctcacagcact
cctgatgcagggaggctgttcttggttgacagcataccaaagttcaccaaagaccccaat
gcaccagtgctcaggctcttcacacagcatgcagtgaacttcatgaaagtagcctacatg
cctcctgtcacagacatcggcccttacccccagtacatccagtttattctgtctgtcacc
aaccgtctgggcaaaacagtcactgggatctgctttaacatcactgtaacaccagaggac
aaccagccaccacaggtcttcaccaatgctctgagcgtagatgaaggaggtgaatccagg
ctcggcccagaacacttactgctgtcagacgtagactccatggaggaagccctgcaggtg
gcactgcagagggagccccagcatggagtcctgcagctcggagggctcccactaaaacca
ggccaggctttcaccgtgcaagacctgaaaagttttaaagttagctatcatcatgacaac
tcagaaactgtggaggacaacatcgaactcacagcgacagacggcaccaactcagtcggt
ttcgtcctgcaggtgaaggtgaagcccgtcaacgacgaggtccctgtggtggttgctggt
ttgaaaccagtcctcagctgtgctgagggagaggcggcagtgatcacggccgagtacatc
tttgccttggacgcagacagcgacaacagcagcttggtgtttctgatcgctcggcagcca
tatcatggcgttgtgctgcggggtggggtggtggtggatcgcttcattcaggctgacgtc
accgcaggcattgtcagctacaaacacacaggattggaggttggactcactcctcgcgac
gacaccatcacctttgtcatttctgacggagagacggagaactccgctctatgctgcggc
ggaagaaatcccaccaggagcggcagcacagtgcggctgcgagacagtctgccggcgtac
gacctccacatcacggtgtttccagtcgacaaccaggcaccttcactgaaaacaggagac
atctttacagtggatgaaggtggaactgtaccgataacctcgtctcatttgaaggcctct
gatgtggacactgtcctgagcgaactggtggtcagtctgatttctccacctcagtttggc
tacattgaaaatgtcctgccaagtcccggctttgagaaaagcaacatgggcgtaagcata
gcctctttttcatacaaagacatcatggacggtcacgtgaactacgtacagtccagacac
cagaggatggagcccaccgctgaccacttcatgctctgtgtgtcagacggcaaacacagc
tctgcacacgttcccttctacatcatcattgacccaacaaacgacgagatcccagagttt
atgactcgcaatatcactgtacgagaaggagaaacgaagcagctggactcgtccgtgctg
aacgcagtagatctggatgttcccaggaacttcctgcgcttcagcatcattaagcctcct
caacatggcactatcattaacgacgggagtgaaaggccggtcaacaagaggcgagaggcc
ggtcctcagtcacctgttgttgactttacgatgactgatctgactaatggtatggatctg
atgtacatgcacgatgactctgagaatatggaggacactttcaccattcagttaaccgac
ggtcgccaccagctccacaggcaagtgacggttaaagtgctgccagtcaatgacgaggag
cctcgtaccattaggaacaacgggctggaggtggaaccaggggagatgaggctcatctcc
agtgtcgcactgtttgcacaggatggcgatacgccgtcttcggaggtcaagtacatgttt
gagagtgttcctacacaaggactgcttcagcttaaggaaggtcaagagtgggttacgctg
acagctgggaggaactgcacccaggaaatggtggacatgaaccttctgcgctatgtgcac
acaggcctgcacgccactcaaacacaggacttctttgtcttccacttgatggacggaaag
aatcaatcaccgcctcagcactttcacatctctgtcaaagagcttgagaaaggaaatatt
gccatctttgtgaagccagcgaatgtcagtcggggtgaccgcgtggttctcaccacagac
gtgctattagcgactgacggcacggaaaagcctgaggagcttttgtacgtcatcaccaac
cctcctgttcatggacacgtggaatacatcaagcaccccggactggccatctccaccttt
agccagatggacatagcagcaaacctcgtagcttatgtgcacgacaaccgagccagcgcg
cccaaagaaacctttcagtttgttgtgagtaatgggcagaccagccgaaacggaagcttt
gaggttacagtggaaatggtggaccgtgtcctcccgtctctgtcatccaacaaaggcgtc
acagtccctcaggattcctccatcatcctgggccctgacagcctggccctgtccgacccc
gacactccacccggcgccctgacctttaccattctccagccgccacaatatggacggctg
attttacgggacgccgtgctgaccactagatcaaatttcacctacagggacatacaggaa
atgaaggtatcctataaacatggcggagggccgtcacagattgaccggtttgccttcact
gcctctgacagcaccagtcgaggcttcctcctggatggacgattacatgtggaacccgta
ttcttcaccattcagatcaagcctttggataagtcgcctcctgaggttgtgaaactcctc
cctctttggaaagtcgaggttttagacaacggtcgacatgggatctttctatcatctttg
caactgaaggcccaagacagcgacagcagagaggaagagctcacgttctgcatcgttcgc
ccaccctactttggtttcctagaaaatattaccacaggcggttttgtgccacagtgcttc
tctcagatggagctgaacaggagaaccatcgtgtatgtcgtcagtggagagacggagtcg
ctctctgacagcctggagttcactgtgtctgatcctttaggaaacactgggtctcctcgt
gtcctcgaattcagttggtcaagtgtggagctgtctcaggctcagttgtctgcgtgtgag
gagcagggaagcgtctcactggacatcgtacggaaaggaaacttggcagagtcttcatac
gtcactgtccaggttaagccagtgactgcagttgggagtaaagatttccttgtgagccct
tcttcccttatacagtttgatccaggagtgtcaaagaggacctggcagatagggatcatt
caggatcatcttgaagaggctgaggaaatgttcgaagtgctcctcgtctcccctgaagcc
acactgatcggcagcatcagcagggcccaagtgaccatcatggattctggaggacaatgc
aggttggaccgggatcgcgaggctcctgtacttggaggaaaggaggtcaagtcagacgcg
tacccccaacatggatccattcaactggagaaactacctttggggagtgaatcggtcgtt
tgggcccgtggagacagcatccccaggcctgcaagtctcccaaaaaagaaaatcagagtg
actggcaatccaaagaccattgcaccgtcctcggtttttcacaatgggacagacatcatt
ttcacatatcatggcatcatgcaaatgcaagtcgaagacgaaagttccccgtccaggaag
ggcagaaaagcgaatattcgtgtggtcagcagaggaccacagctgcaggcatcttctgca
ctgactgattccaaacaggaacccaaaagaagagtttcgactacccagaaaactggaccg
gctaaagggcttgccacagctgagcactccattcccaagccatgtgtgccagaattgatg
ggactcctgcatttcaaccagacggctaatcggctctttcactgcaacggtgtgtcctgg
aaaccctggtcgccaactgatcagatggtgaaatctcagaagtgccctcgggggtggacc
tttcacagtggtcactgttacatcctcagcactgagcacaaagccacctggagcacagcg
aacagagcctgcagggagagatataaaggaactttagcaagcgttctctcgaaagtggac
atggactggctgtgggacttaactgggagaaaaccattctggataggtctgaatgacagg
gaaggccgagggcactgggagtgggcgggtggcgagccggtcagctacaccaactggaga
aaagcgcccactcgctccaaaatgaagggaggcaaaaagtgcgtcctggtgtggagaaga
gccaagtggcagatacgggattgtaaaaccagcagggggcatcgctttgtgtgttcagtc
aagacttga
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integrated database retrieval system
