Solea senegalensis (Senegalese sole): 122767122
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Entry
122767122 CDS
T07721
Name
(RefSeq) CPD photolyase isoform X1
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
ssen
Solea senegalensis (Senegalese sole)
Brite
KEGG Orthology (KO) [BR:
ssen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ssen03400
]
122767122
Enzymes [BR:
ssen01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
122767122
DNA repair and recombination proteins [BR:
ssen03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
122767122
Prokaryotic type
122767122
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_photolyase
Motif
Other DBs
NCBI-GeneID:
122767122
NCBI-ProteinID:
XP_043878427
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All DBs
Position
LG1:complement(8139725..8145559)
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AA seq
552 aa
AA seq
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MICIWRSSLSSFSPRRLLKLIVDGNRRPRQSLVPLIEAYTCEPTMSGKKRKATSAAKVAS
AKQQKLVPTKEEKQKAGGWLHDLVTQQRSENQEMKFNKKRCRFISDTEKIKQGSEGVLYW
MLRDQRVQDNWALTYAQRLAVKENLPLHICYCLDVPKSELSTLRHYNFMLKGLEEIAKEC
KTLDVQFHLLHGSAEEVVPGFVSDRSLGAVVTDFSPLREPLQWLEDMKKTLPKDIPLIQV
DSHNIVPCWVASPKLEYAARTIRGKITNLLPEFLTEFPLVEKHPHTATRTAKPVDWDKLL
ASLQVDRTVGEPEWAKPGTKAGMAMLESFIDVRLKLFDNLRNDPNANALSQLSPWIRFGH
LSAQRVALQVKHSGKSTGHSITSFIEELVVRRELTDNFCFYNKKYDSVEGAYEWAQKTLK
DHAKDKRPYLYTREQLEKAKTHDKLWNAAQYQMVSEGKMHGFLRMYWAKKILEWTSSPEE
ALSTALYLNDRYELDGQDPNGFVGCMWSICGIHDQGWAERDVFGKIRYMNYKGCTRKFDV
ARFEQKYCPKNL
NT seq
1659 nt
NT seq
+upstream
nt +downstream
nt
atgatctgcatctggaggagctcattgtcttctttttcaccaaggcgactcttaaagctc
atcgtcgacggcaatcggaggccacgccaaagtctcgtcccactgatcgaggcgtacacc
tgtgaacctaccatgtcaggcaaaaagcgtaaggcaacctctgctgctaaagtggcaagt
gccaagcagcagaagctggttcctacaaaggaggagaagcagaaagctggaggctggctg
cacgaccttgtcacgcagcagaggtcagagaaccaggagatgaagttcaacaaaaagcgc
tgtcgcttcatttctgacactgagaagataaagcagggctcagagggcgtcctgtactgg
atgttaagggatcaaagagtacaagataactgggcgctgacctacgcacagcggcttgct
gtgaaagaaaaccttcctctgcacatctgttactgcttagatgtcccaaagtcagagctg
tccactctgagacattacaacttcatgctgaaaggactggaagaaatagcaaaggaatgt
aaaaccttagacgtccagtttcacttactccatggctcagcagaggaagttgtgcctggc
tttgtttctgaccgcagcctcggggcagtggtgacagacttctctccgctcagagagcca
ctgcagtggttggaggacatgaaaaagacgcttccaaaggacattcccctcatacaggtc
gactcccataatattgttccctgctgggtagcgtcgccgaaacttgaatacgctgccagg
accatcagaggaaaaatcaccaatcttctgcccgagttccttaccgagtttcctctggtg
gagaaacatccgcacactgcgacaagaacagccaaaccagtcgactgggacaaacttctg
gcctcgctgcaggtcgacagaacagtcggagagcccgagtgggccaaacctggcaccaag
gccggaatggccatgctggagtccttcattgacgtacgccttaagctgtttgacaacctg
cgcaatgatccgaacgccaacgccctcagtcagctctccccctggatccgctttggccac
ctgtcggcgcagcgagtggctctgcaagttaaacacagcgggaaaagcaccggccattcc
atcacctccttcatcgaggagctggtggtgcgccgcgagctgaccgacaacttctgcttc
tacaacaagaaatacgactctgtggagggtgcatatgagtgggctcagaagaccttgaaa
gaccatgccaaagataaaaggccctatctgtacacgcgtgagcagctggagaaagcgaag
acacatgacaaactgtggaacgcagctcagtaccagatggtcagtgaagggaagatgcat
ggtttcctgaggatgtactgggccaaaaagattttggagtggacatcttcaccagaggag
gcgctctccactgccctgtaccttaacgatcgctatgagctggacggccaggaccctaat
ggctttgttggctgcatgtggtccatctgtggcatccatgaccaaggctgggcggaaagg
gatgtttttgggaagatccgctacatgaactacaaaggctgcactcgcaagtttgacgtc
gctcggtttgagcaaaagtactgtcccaaaaacctgtga
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