Solea senegalensis (Senegalese sole): 122767142
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Entry
122767142 CDS
T07721
Symbol
mib1
Name
(RefSeq) E3 ubiquitin-protein ligase mib1 isoform X1
KO
K10645
E3 ubiquitin-protein ligase mind-bomb [EC:
2.3.2.27
]
Organism
ssen
Solea senegalensis (Senegalese sole)
Brite
KEGG Orthology (KO) [BR:
ssen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ssen04121
]
122767142 (mib1)
Enzymes [BR:
ssen01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
122767142 (mib1)
Ubiquitin system [BR:
ssen04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
122767142 (mib1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ank_2
Ank
Ank_5
SH3_15
MIB_HERC2
Ank_4
Ank_3
zf-C3HC4_3
ZZ
Ank_KRIT1
zf-C3HC4_2
Prok-RING_4
Sina_RING
zf-RING_5
Motif
Other DBs
NCBI-GeneID:
122767142
NCBI-ProteinID:
XP_043878457
LinkDB
All DBs
Position
LG1:15811041..15863966
Genome browser
AA seq
1042 aa
AA seq
DB search
MTTGRNNRAMMEGVGARVVRGPDWKWGKQDGGEGHVGTVRSFESPEEVVVVWDNGTAANY
RCSGAYDVRILDSAPTGIKHDGTMCDTCRQQPIIGIRWKCAECTNYDLCTTCYHGDKHHL
RHRFYRITTPGSERVLLESRRKSKKITARGIFTGGRVVRGVDWQWEDQDGGNGRRGKVTE
IQDWSAASPHSAAYVLWDNGAKNLYRVGFEGMSDLKCVQDAKGGSFYRDHCPVLGEQNGN
RNPGGLQIGDLVNIDLDLEIVQSLQHGHGGWTDGMFETLTTTGTVCGIDEDHDIVVQYPS
GNRWTFNPAVLTKANVVRSGEVAAGAEGGTSQFLVGDLVQICYDIDRIKLLQRGHGEWAE
AMLPTLGKVGRVQQIYSDSDLKVEVCGTSWTYNPAAVTKIAPSGSAVSNASGERLSQLLK
KLFETQESGDINEELVKAAANGDLAKVEDILKRPDVDVNGQCAGHTAMQAASQNGHVDVL
KLLLKHSVDLEAEDKDGDRAVHHAAFGDEGSVIEVLQRGGADLNARNKRRQTPLHIAVNK
GHLQVVKTLLDFGCHPSLQDSEGDTPLHDAISKKRDDMLSVLLEAGADVTITNNNGFNAL
HHAALRGNPSAMRVLLSKLPRPWIVDEKKDDGYTALHLAALNNHVEVAELLVHQGSASLD
IQNVNQQTALHLAVERQHTQIVRLLVRAEAKLDVQDKDGDTPLHEALRHHTLSQLRQLQD
MQDVSKVEPWEPSKNTLIMGLGTQGAEKKSAASIACFLAANGADLTIRNKKGQSPLDLCP
DPSLCKALAKCHKEKSSVQVGTRSPSLNSNIESLEECMVCSDMKRDTLFGPCGHIATCSL
CSPRVKKCLICKEQVQSRTKIEECVVCSDKKAAVLFQPCGHMCACENCASLMKKCVQCRA
VVERRTPFVLCCGGKGMEDDAADDDDDDDDDDDDDDDLTGSSNTMAGGSQELLQPNNLAL
SWSSGNIPALQRDKDNTNVNADVQKLQQQLQDIKEQTMCPVCLDRLKNMIFMCGHGTCQL
CGDRMSECPICRKAIERRILLY
NT seq
3129 nt
NT seq
+upstream
nt +downstream
nt
atgaccaccggcaggaataaccgggcgatgatggaaggagtcggggcgagagtggtgcgc
ggaccggactggaagtgggggaagcaggacggaggagagggacatgttggcaccgtcagg
agttttgaaagtccagaagaggtggttgttgtctgggataatgggacggctgctaactac
cgttgttctggagcatacgacgtgaggatattagacagtgcaccaacaggcatcaagcac
gatggaaccatgtgtgacacctgccgtcaacagcccatcattggtattcgctggaaatgt
gctgagtgcaccaattacgacctttgcacaacctgttaccatggagacaagcatcacctg
agacatcggttctacaggatcaccacccctggcagtgagagagtacttttggagtcacgg
cgcaagtcgaagaaaatcactgcccgagggatcttcactggtggccgggtggtgagagga
gtggactggcagtgggaggaccaggacggaggcaatgggaggaggggaaaggtgacagag
atccaggactggagtgcagccagtcctcacagtgctgcctacgttctgtgggacaatggg
gccaagaacctgtaccgtgttggctttgagggaatgtcggatctgaaatgtgtccaagac
gccaaaggaggctcgttttacagagaccactgtcctgttttaggtgagcagaatggcaac
agaaatcctggaggtctacagattggagatctggtcaacattgacttagaccttgagatt
gtccagtccctccaacatggccacggtgggtggactgacggcatgtttgagactctcacg
accaccggcacagtatgtggcatcgatgaggatcacgatattgtggttcagtaccccagt
gggaacagatggacgttcaatccagccgtgctgacaaaggccaacgtagtgcgcagcggg
gaagttgcggccggtgcagagggaggcacttcccagttcctagtgggagacctggtccag
atttgctacgacatcgaccgcatcaagctgctgcagagaggccacggagagtgggctgaa
gccatgctgcctaccttaggcaaggtgggtcgtgtgcagcaaatctactctgatagtgac
ctgaaggtcgaggtttgtggaacttcttggacgtacaatcctgctgctgtcactaagatc
gccccctctggctcagctgtcagcaacgcctctggagagcgtctgtctcagttgctgaag
aaactgtttgagacgcaagagtctggagacatcaatgaggagcttgtcaaggcggcagcc
aatggagacctggccaaggtggaagacattcttaagagaccggatgtggatgtgaatgga
cagtgtgctggacacactgctatgcaggcagccagtcagaacggtcacgtggatgtccta
aagttgctgcttaaacacagtgtggacctggaagctgaggacaaagacggagaccgtgcg
gtgcaccacgcagcctttggtgatgagggctctgtcattgaggtgctgcagaggggcggt
gccgacttgaatgccaggaacaagcgaaggcagactccgttacacatagctgtcaacaaa
ggccacttgcaggtggtcaaaaccctgctggactttggatgccaccccagcctccaggat
tcagagggagacacgcccctgcatgatgccataagcaagaagagagatgacatgctgtcg
gtgctgctcgaggccggtgctgacgtcaccatcactaacaataacgggttcaatgccttg
catcacgcagcactacgtgggaaccccagtgccatgcgtgtgttgctatccaaactgccg
aggccttggattgtagatgagaagaaggacgatggttacaccgcactgcacctggccgcc
ctcaataaccacgtggaggtggcggagctgttagtgcaccagggtagcgccagcttagac
atccagaatgtcaaccagcagacagcattacacctggcagtggaacgccaacacacccag
atagtacggctgctggtgcgagcagaagccaagctggatgtgcaggacaaggatggggac
acaccacttcacgaggcactgcgtcaccacacactgtcccaattgcgacagctccaagat
atgcaggatgtcagcaaagtggagccgtgggaaccctcaaagaacacgttaatcatgggc
ctgggcacccagggggcagagaagaagagtgcagcatccatcgcctgcttcctggcagct
aatggagcggacctgaccattcgtaacaagaagggccagtcccctctagacctgtgtcct
gaccccagcctctgcaaagctcttgccaaatgtcacaaagaaaagagcagtgtccaggtg
ggcacccgcagcccgtctctgaacagcaacatcgaatcactggaggagtgtatggtgtgt
tctgacatgaagagagacactctgttcggaccgtgcggacacatcgccacctgctctctc
tgctccccgcgtgtcaaaaagtgtctcatctgcaaggagcaggtccagtcaagaaccaag
attgaggagtgtgtagtctgctctgacaaaaaggcagccgtcttgttccagccctgtggt
cacatgtgcgcttgtgagaactgtgccagcctcatgaagaaatgcgtacagtgtcgggct
gtagtagaacgccgcactcccttcgttctgtgctgtggagggaaaggtatggaggatgat
gccgctgatgatgatgatgatgatgatgatgatgatgatgatgatgatgaccttacaggg
agctctaacactatggcaggggggtcgcaggagcttctccagcccaacaatctggcacta
agttggtccagtggaaacatccctgccctgcagagagacaaggacaacactaacgtcaac
gctgacgtacagaagctgcagcagcagctccaagacattaaggagcagaccatgtgtcca
gtgtgtctggaccgactgaagaacatgattttcatgtgcggccacggcacctgccagctg
tgcggggaccggatgagcgagtgccccatctgccgcaaggccatcgagcgccgcatcctc
ctctattag
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