Solea senegalensis (Senegalese sole): 122767256
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Entry
122767256 CDS
T07721
Symbol
dctn1a
Name
(RefSeq) dynactin subunit 1a isoform X1
KO
K04648
dynactin 1
Organism
ssen
Solea senegalensis (Senegalese sole)
Pathway
ssen04814
Motor proteins
ssen05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
ssen00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
122767256 (dctn1a)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
122767256 (dctn1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ssen04131
]
122767256 (dctn1a)
03036 Chromosome and associated proteins [BR:
ssen03036
]
122767256 (dctn1a)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ssen04812
]
122767256 (dctn1a)
Membrane trafficking [BR:
ssen04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
122767256 (dctn1a)
Chromosome and associated proteins [BR:
ssen03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Dynactin complex
122767256 (dctn1a)
Cytoskeleton proteins [BR:
ssen04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Dynactins
122767256 (dctn1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dynactin
CAP_GLY
Lipase_GDSL_2
DUF7259
Motif
Other DBs
NCBI-GeneID:
122767256
NCBI-ProteinID:
XP_043878607
LinkDB
All DBs
Position
LG3:9490480..9501862
Genome browser
AA seq
1242 aa
AA seq
DB search
MSSAGTVESGKPPKIGSIVEVTGKGQRGTVAYIGATLFASGKWVGVILDEPKGKNDGTVQ
GKRYFNCQENHGIFVRQSQIQVVEEGSSATSPDIPESGAAKTLRLRDIPETPKTSKQTPL
TIKKSSTRRSAKASRESLSSSLSDVSEVSLSSHQGALGAPIMPQPSGSSVAATVPATPSK
EEPAISKQEEESLRAQVKDLEEKLETLKMKRTEDKAKLKELEKHKIQLEQLQEWKNKMQE
QQTELQKQLKEAKKEAREAQEAKDRYMEEMSDTADAIEMATLDKEMAEERAESLQVEVET
LKEKVEELSMDLEILRHEISEKGSDGAASSYHVKQLEEQNSRLKEALVRMRDLSASEKQE
HVKLQKQMEKKNTELETLRTQKEKLQDEVKQAEATIDELKEQVDAALGSEEMVETLTERN
LDLEEKVRELRETVTDLEAINEMNDELQENARETEMELREQVDMSSAKVREAEKRVEAAQ
ETVADYQQTINKYRELTTGLQDANRELISQQNANAEQVQQPPAELFDFKIKFAETKAYAK
AIEMELRKMEVVQSSRQVSLLTSFMPDSFLRHGGDHDCILVLLLIPRLICKADLISKQAQ
EKFDLNGNLVQGTALRGPPGEQRSFAAGLVYSLNLLQATLHKYEQALNTCSVEVFKRMGT
LYSEMTFHERSLDYFIDLLYKDQLDETVQVEPLTKAIKYYQQLYSVHLADHTEDCTVQLA
DHIKFTQSALDCMGVEVARLRAFLAAGQESSNLAVLLKDLDTSCSDIRQFCKKIRRRMPG
TDVVGVPAALNYGPEVSETLTESRRQLTRVVAVLQEVAAAGAQMAAPLPEQEGLNALKMD
DITFKAVEQVYGSHGQSDPECLRQSCSSVIATMNKMATAMQEGEYDGDKPQSKTTPVEMR
AATVRAEMTDAEGLGVKLEDRETVIKELKKSLKIKGEELSEANVRLSLLEKKLDTSTKDA
DERVEKIQTKLNENLALLKKKEKEFEETMDALQADIDQLEAEKAELKQRITNQSKMTIEG
LRGSPASGIASLVQGVGGVPPSITGPMEVVDSPLLRQQVEVQRLGIKCLKNENNRLKAEK
MRAQLASLPPLCPSKLPQVSKESSMPPEGLNTGIYRRTDQLLATLLKLSAEFKVVDITGK
TAVSASAQMLEQTARLQNLSDALDKLKGEVAEHVVSYQPGAKASSDFATFPVSSFVKAKQ
EKQGKTVFVGRVSVPCARGQEQVHRLVLSQQQLQQVHSLLMA
NT seq
3729 nt
NT seq
+upstream
nt +downstream
nt
atgagcagtgcaggaacagtggagagtggtaaacctccaaaaattggttctatagtagag
gtgacggggaagggtcagcgtggcactgttgcctacattggagccacactctttgcctct
gggaaatgggtgggtgtcatactagatgaacctaaaggcaaaaatgatggcaccgtgcag
ggaaaacgctacttcaactgtcaggaaaatcatgggatatttgtcagacaatcacagatt
caagtggtggaagaaggctcaagtgccacctcaccagatattcctgagtctggcgctgcc
aagacactcagactaagagacattccagagactcctaaaacttccaagcagaccccattg
actattaagaagtcttctacccgccgctctgccaaggcatctcgagagagcctgtcgtcc
tctctgtctgatgtcagtgaggtgagcctgtcctcccaccagggtgcactgggagctccc
atcatgccgcagcccagtgggtcatctgtggcagccacagtcccagctactcccagtaag
gaggaacctgccatttccaaacaggaggaggaatcactgcgagctcaggtcaaagacctg
gaggagaaattggagacactgaagatgaagcggacagaggacaaagccaaactaaaggag
cttgaaaaacacaaaattcagctggagcagcttcaggaatggaagaacaaaatgcaggaa
cagcagactgagctgcagaaacaactgaaagaagccaagaaggaagcccgtgaagcacag
gaggccaaggaccgctacatggaagaaatgtcggacacagcagatgcaattgagatggca
acactggacaaagagatggctgaggagcgagcagagtcgttgcaagtcgaggtggaaaca
ctgaaagagaaagtggaggagctttctatggacctggagatccttagacatgagatttca
gagaaaggctcagatggagctgcctcaagctaccatgtcaaacagctggaggagcagaac
agtagactgaaggaggcactagtcaggatgcgggacctgtctgcttcagagaaacaggaa
catgtgaagctacagaagcagatggagaagaagaacacagagctggagactctcaggact
cagaaggaaaaactgcaggatgaagtcaagcaggcagaggccactattgatgaactgaaa
gagcaggtggatgctgctctgggttcagaggagatggtggagacgctgacagagaggaac
cttgacttggaagagaaagtcagagagctgagagaaacagtcacagatttggaggcgatc
aatgagatgaacgatgagctgcaggagaacgccagggagactgaaatggagttgagagaa
caggtggacatgagcagtgcaaaggtcagggaggctgagaagagagttgaggctgctcaa
gagactgttgctgattaccagcagacgatcaacaaatacagagagctcaccaccgggctg
caggatgctaatagggagctgatcagtcagcagaatgccaatgctgaacaagttcagcaa
ccacctgcagaactatttgactttaagatcaaatttgcagagaccaaggcctacgccaag
gccattgagatggagctgaggaaaatggaagtggttcagtccagcagacaggtttccctc
ctcacctccttcatgccagactcctttctccgtcatggtggagatcatgactgcattctg
gttcttcttctcatccccaggctcatctgcaaggctgatctcatcagtaaacaagcccaa
gagaagtttgacttgaatgggaacctggtgcaggggacagcgttgagaggtcctccagga
gaacagcgcagttttgctgcaggactggtgtactccctcaatttgctgcaggctacgctg
cacaaatatgaacaggctctaaatacctgcagtgtagaggtttttaagcgcatgggtaca
ctttactctgaaatgaccttccatgagcgctccctggattatttcattgatctgctgtat
aaagaccagctggatgagactgttcaggtggagcccctgactaaagctatcaagtactat
cagcaactgtacagtgtccatctggcagatcatactgaggactgcacagtgcagctggct
gatcatatcaaatttacccagagcgccctggactgtatgggagtggaagttgctcgtctg
cgggctttcctggcggcgggtcaggagagctccaaccttgccgtgcttctgaaggacctg
gacacttcctgctctgacatcagacagttctgcaagaagatacgccgtcgcatgcctgga
acagatgtggttggagttcctgctgctctcaattatggaccagaggtgtcagagacgctg
acagagagcagacgccagctgacccgtgtggtggccgtgctgcaggaagtggcagcagct
ggggctcagatggctgctccgctgccagaacaggaaggtctcaatgctctcaaaatggat
gatatcaccttcaaggctgtggagcaggtttatggctcccatgggcagagtgacccagaa
tgtctgcgtcagtcctgcagttctgttatagctaccatgaacaagatggctactgccatg
caagaaggagagtatgatggtgacaaacctcagtccaagaccacccctgttgagatgaga
gcagccaccgtcagggccgagatgacggatgctgagggtctaggagttaaactagaagac
agagagactgtaattaaggagctcaagaagtctctcaagatcaagggtgaggagctgagt
gaagccaacgttcgtctgagtctgctggagaagaagctggacacctccaccaaagatgca
gatgaaagagtggagaagattcagaccaaactcaacgagaatctcgccctgttgaagaaa
aaagaaaaggaatttgaggaaacaatggatgccctgcaggctgatatcgaccagctggag
gcagagaaggcagagctgaaacaacgcatcacgaaccaatcaaagatgaccatcgaaggc
ctgagagggtcacctgcctctggaattgcctcacttgttcagggtgtaggaggtgttcct
ccatccataaccgggccaatggaagtggtggactctcctctcctcagacagcaggttgag
gttcagagactgggcattaaatgcctcaagaatgaaaacaacagactcaaggcagagaag
atgagagcccagctggcctctctgcctccactctgcccctccaaactgccacaagtgtcc
aaagaaagttctatgcctccagagggtctgaacactggcatctatcgtagaactgaccaa
ctgctggcgacactgctaaagctcagtgcagagtttaaggtggtggacatcactgggaaa
acagcagttagtgccagtgcccagatgctggagcagacagctcggctgcagaacctcagt
gatgctctggacaaactcaagggagaagtagctgaacatgtagtttcatatcagcctgga
gcaaaggcttcctctgactttgccaccttcccagtctcctcctttgttaaggctaagcaa
gagaagcaaggaaaaacagtgtttgtaggtcgtgtttcagttccatgtgcacgtggacag
gaacaggtccaccgtctcgtcctatcacagcagcagctgcagcaagtgcactccctcctt
atggcataa
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