Solea senegalensis (Senegalese sole): 122767338
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Entry
122767338 CDS
T07721
Symbol
optn
Name
(RefSeq) optineurin
KO
K19946
optineurin
Organism
ssen
Solea senegalensis (Senegalese sole)
Pathway
ssen04137
Mitophagy - animal
ssen04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
ssen00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
122767338 (optn)
04137 Mitophagy - animal
122767338 (optn)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ssen04131
]
122767338 (optn)
Membrane trafficking [BR:
ssen04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
122767338 (optn)
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
122767338 (optn)
Autophagy
Mitophagy
PINK1-Parkin associated proteins
122767338 (optn)
Xenophagy
Cargo receptors
122767338 (optn)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CC2-LZ
NEMO
zf_C2H2_10
ATG16
DUF4795
PKcGMP_CC
EDR4-like_1st
CENP-F_leu_zip
Motif
Other DBs
NCBI-GeneID:
122767338
NCBI-ProteinID:
XP_043878759
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All DBs
Position
LG3:complement(24510690..24517332)
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AA seq
523 aa
AA seq
DB search
MASEGPVMNGDISCSPSQSGTLEETLQQMNILIQENRDLKEALRQTNLTMKERFEGLSVW
REKQREERDFLERRLEEARVRIEVLTRHNKDLSRRLEESGGAGEALATSSELEALRAQVA
RLQAEKNDLVAMNSELRLKADESSDSFIEIIKVSDDGSGGAKEVCSTERSSLDLSMTASR
LDNKEVTVSQLIQSLRNETQRGDQLQAELQDFASRIRELEKRKSNKDESIQTTQPDPKED
KAASEVENLKSQMMTLFKELQQAQTKLDEAEGMKKNLQDKCRDVEQDVTTLRAQLVEKQS
VQSENDRLKLQLDSMQAQSQLEQKKAGEERNNLAQLKDAYTKLFEDYNEIKEERKKRESQ
LVNKGVVDDLQARLTAAEEALAAKQNKIDDMKQEIFQKEKELETISVFQAQAEVYSSDFY
AERAAREKLHEERERLAAQLEYVKKQNAQMQDEMESLGRQSLNEMKMRHVSLGGNPHGAG
ASLVGRGTDWQHQGNIPEHACPKCNEILPDLDSLQIHIMDCIN
NT seq
1572 nt
NT seq
+upstream
nt +downstream
nt
atggcatctgaaggccctgttatgaatggtgacatatcttgttccccaagtcagtctggc
acactggaggaaaccctgcagcagatgaacatccttatccaggagaaccgcgacctgaaa
gaggccctgcgtcagaccaacctgacaatgaaggagcggtttgagggcctgtctgtgtgg
cgggagaagcagcgggaagagcgggacttcctggagagaaggctggaggaagctcgtgta
cgcatagaggtgttgacccgccacaacaaggacctgagcaggaggcttgaggagtctgga
ggtgcaggagaagctctagcaacatcatcagagctggaggccctgcgtgctcaggtcgct
cggctgcaggcagaaaagaacgatctggtggctatgaactctgagttgcggctcaaggcg
gacgagtcgtctgactcgttcattgagatcatcaaggtgtcggatgatggcagcggtggt
gcgaaagaagtgtgcagcacagagcgcagcagtctggacctgagcatgacggcgtcccgg
ctggacaacaaggaagtgacagtgagccagctgattcagtcgctgaggaacgagactcag
cgtggtgatcagctgcaggcagagctgcaggactttgcttctagaattagagagctggag
aagaggaagagcaacaaagatgaatcaatacaaacaacccagccagaccccaaggaggac
aaggcagcgtcagaggtggagaatctcaagtctcagatgatgacactgttcaaagagctg
cagcaggcgcagaccaaactagatgaagcagaaggcatgaagaagaacctgcaggacaaa
tgccgggacgttgagcaggacgtgacaactctgagggctcagctggtggagaaacaatct
gttcagtcagagaatgaccggctgaagctgcagctggacagcatgcaggcccagagccag
ctggagcagaagaaggcaggagaggagagaaacaaccttgcccagctgaaggatgcttac
accaagctgtttgaagactacaatgagatcaaagaggagaggaagaagagagagtcccag
ctggtgaataagggggtggtggacgacctgcaggcccggctgactgccgctgaagaagcc
ctagctgcaaaacagaacaagattgatgacatgaagcaggagatctttcagaaagagaag
gagctggaaaccatatctgtgttccaggctcaggcagaggtgtactcctcagacttctat
gccgaacgggcagcgagggagaaactccatgaagagagggaacgtctggctgctcagctg
gagtatgtcaagaagcaaaatgcccagatgcaggatgaaatggagtcactgggcaggcag
tcattgaacgagatgaagatgagacatgtctcacttggaggaaatccacacggagctggt
gcatctctggttggaagaggtactgactggcagcatcagggcaacattcctgaacatgcc
tgtcccaagtgcaacgagatcctgccagacctggactctttgcagattcacatcatggac
tgcattaactag
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