Solea senegalensis (Senegalese sole): 122767552
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Entry
122767552 CDS
T07721
Symbol
nfasca
Name
(RefSeq) neurofascin homolog (chicken) a isoform X1
KO
K06757
neurofascin
Organism
ssen
Solea senegalensis (Senegalese sole)
Pathway
ssen04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
ssen00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
122767552 (nfasca)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ssen04515
]
122767552 (nfasca)
Cell adhesion molecules [BR:
ssen04515
]
Immunoglobulin superfamily
L1 family
122767552 (nfasca)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
Ig_2
fn3
ig
Bravo_FIGEY
V-set
Ig_4
Ig_DSCAM-DSCAML_C
C2-set_2
BiPBP_C
Ig_C17orf99
DUF3792
Motif
Other DBs
NCBI-GeneID:
122767552
NCBI-ProteinID:
XP_043878802
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All DBs
Position
LG4:14450225..14511279
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AA seq
1369 aa
AA seq
DB search
MLGQGGHVALARLSLLLLLWREATLIEVPQDPKIQQDMKQPPTIIKQSGKDYIVDPRDNI
IIECEAKGNPVPTFSWRRNGKFYNIGKDPRVTMRKRSGTLEIGFRSGGRPVDYEGEYQCF
AANDFGMAMTNKILLRVSKAPLWPKEVLEPVVVTEGSPLVLPCNPPPGLPPPFTFWMNSA
MIPIPQDKRVSMGLNGDLYFSNVIGQDSHTDYSCNARFPFTHTIQQKNPFTLKVQNSRKV
VETTPMFLTPSGTESSKMVLRDEQLLLECIAAGLPTPTIKWFKKGGDLPGHKVKFDKFNK
TLKIVSVSEEDAGAYVCMANNRLGSIRHTIYVEVKAAPYWLDKPTDLVLSPDENGRLVCR
ANGNPKPTIQWLINGQPIETSPPNPSTQVLGDTIIFRSVQMGSSAVYQCNASNQHGYLLA
NAFVSVLDMRPRMLGPKNQLIKVVENNRTFLDCPFFGSPLPELRWFKNGQGSGLDGGQYR
VYINGTLEIKKARAEDEGTYTCVASSILGKAENQVRLQVKEPTRIVRAPEHESVTRGSTV
SFSCKVKSDPSLPVTVTWTKDDKFLYFGWRLKKDDDSLTINNVNEGDEGTYTCTVKSEID
QDSASARLTVLEEAFNPSIYSALPPDRPDPPMDLELSDPAARSIRLTWIPGNEHRSPIRE
FMVQFEENRWEPGRWQNLSTYPGDLNSVILQLAPFVNYQFRVIAINSVGQSKPSNPSPRY
KTSGAAPDAIPRGLRGWGSKNDNMEITWEPLLDLERNGPNLHYNVWWRLKDTEEEWSNVT
TEGTKHVVHNTETYVPYEIKIQARNDFGPGPESNVVNGYSGEDKPTDAPKDLRVSKVNST
EVNVHWKSVDPSSVLGEFKEYRLYYWRESSLVPGLSVRMENKTKGFYSTMPEPSATLTDL
VPYSKYKMVMVAANNRFEGPPSNPVEFTTKEGVPDAPRFFRINRRSFDTLYLEWDKPLEP
NGNLIGYQLKYQTVNGSKVVQSHLQTFLPNATHFTLRMPDRSVHYKFFLSALTQVGTGEV
YAEESPHFANEENVTDTTGLVDLTDASVASRFTPTPTPLASLPPTTITPTTISTSTTTTP
TTTASTTTTTTPTTTTTTTATTTTPSTTTTATPTEATMTSTPPVLVTTRHTDQNVLVVPG
RKIWNLTVEPNSNYANVSWKHNFPAGSSEFVLEFTLDSDKTVKVVSVNQQPPVKVADLIA
GAKYHLRVYSHELNSISSKYVTFKTKPAYIDQVDIATQGWFIGLMCAIALIILILLIVCF
IKRSRGGKYPVRDKKDLPLDPVDHKDQDGSFDYHSDEDNKPLQGSQTSLDGNVKESDDSL
VDYGEGGDGQFNEDGSFIGQYTVKKDKDETEGNESSEATSPVNAIYSLA
NT seq
4110 nt
NT seq
+upstream
nt +downstream
nt
atgttggggcagggcgggcatgtggccctggctcgcctctcattactgcttctactgtgg
cgtgaagcaacactcatcgaagtcccacaagacccaaagatccagcaagacatgaagcag
ccccccactataatcaaacagtcagggaaggactacattgtcgatcccagagataacatc
atcatcgagtgtgaggccaagggcaacccagtgcctacgttctcatggcgaaggaatgga
aagttttacaatatcggcaaagatccaagggtgacgatgcgaaagcgctcggggacgttg
gagatcggtttccgtagcggaggacgaccagtagactacgaaggagagtaccaatgtttc
gccgcaaatgactttggaatggctatgaccaacaaaatcctcctccgggtctcgaaggct
cctctgtggccaaaggaggtgctggagccagtggtggtgactgaaggctcccccctagtt
ctaccctgcaaccccccacctggtcttcctcctccgttcaccttctggatgaacagtgct
atgattccgataccacaggataagagagtctccatgggattgaacggagacctgtacttc
tccaatgtcattggtcaagactctcacacagactacagctgcaatgctcgcttccccttc
actcacaccatccagcagaagaacccgttcacactcaaagttcagaacagccgtaaagta
gtggagactacacccatgttcctcaccccgtcaggcactgagagctccaagatggtgcta
cgagatgagcagctgctgctagagtgtatcgctgctggactaccaacgcccaccatcaag
tggtttaagaagggtggggacctgccaggacacaaagtgaagtttgataaatttaacaag
accctgaagattgtcagtgtgtcagaggaggatgctggggcttatgtgtgcatggctaac
aatcgtttaggcagcatacgccacaccatctatgtcgaagtgaaagcggctccttactgg
ctagacaaacctacagacctggtgctttccccggatgagaatgggcggctggtgtgtcgc
gccaatgggaaccctaaacctaccattcagtggctgatcaatggacagcctatagaaacc
tctccccccaaccccagcacacaggtgttaggtgacaccatcatcttccgctcagtgcag
atgggaagcagtgctgtctatcagtgcaacgcctccaaccagcacggttacctgttggcc
aatgcctttgtcagtgttctagacatgcgtccgaggatgctgggccctaaaaaccagctg
attaaagttgttgaaaacaatcgcaccttcctggattgtccgttctttggttcccctctg
cctgagcttcgttggtttaagaatggacagggcagcgggctggatggtggtcagtaccgc
gtttacatcaacggcacgctggagatcaaaaaagcacgagcagaagacgagggtacctac
acgtgtgtggccagcagcatcctgggcaaagctgagaaccaggttcgcctgcaggtcaaa
gagccgacacgtatcgtccgagcccctgagcacgagtcggtcaccaggggatccacggtt
agtttcagctgtaaagtgaagtctgatcccagcctgcctgtcactgtgacctggaccaag
gatgacaagtttctctattttggatggaggctgaagaaggacgatgactcactgaccatc
aacaatgtgaatgagggtgatgagggaacatacacctgcactgttaaatctgagatagac
caggactctgcctctgcccgcctcactgtgttagaggaagccttcaacccctcaatctat
agtgccttgcctccagaccgcccagaccctcccatggatctggagctgtcagacccagca
gcccgcagcattcgcctcacctggatccctggaaatgagcacaggagccccatcagagag
ttcatggtccagtttgaagagaaccgctgggagccaggcaggtggcaaaacctgtccact
taccctggggacctcaactctgtcatcctgcagctcgccccctttgtcaactaccaattc
agggtcatagcaatcaactcagtggggcagagtaagcccagcaacccctcacccagatac
aagaccagtggagctgccccggatgccattcccagaggtctccgaggatggggttccaaa
aacgacaacatggagatcacgtgggagcctctgctagatctggagagaaatggtccaaac
ctgcactataatgtgtggtggaggctgaaggatacagaggaggagtggagtaatgtgacc
acggagggcaccaaacatgttgtccacaacacagaaacctatgtgccttatgagatcaaa
atccaggccagaaatgattttggaccaggaccggagtctaatgtggtcaatggatactct
ggagaggacaagcccaccgacgctcccaaagacctgcgggtatcaaaagtcaacagcact
gaagtcaacgtccactggaaatctgtggacccaagctctgtcctgggagagttcaaagag
tacagattgtattactggcgtgagtccagtctagtcccgggtctgtcggtcaggatggag
aacaagaccaaaggcttctacagcaccatgcccgagccgtctgccaccctcactgacctg
gtgccctactctaaatataagatggtcatggttgcggccaacaatcgctttgagggtcct
cccagcaacccagtggaattcaccaccaaggagggagttcctgatgctccaaggttcttc
aggatcaaccgcaggagttttgacacactctacttggaatgggacaaacctttggagccc
aacggcaatctgattggataccagctcaagtatcaaacagtcaatggttccaaggtagtt
cagtcacacctgcagacctttcttccaaatgcgacacacttcaccttgcgcatgccggac
cgatccgtccactacaagttcttcctgtcagcactgactcaggtgggaacaggcgaggtc
tatgctgaggagtctccacactttgcgaatgaggaaaacgttactgatactacaggtcta
gtcgatcttaccgacgcctctgtggcctcacgtttcactcctactcctactcctcttgct
tctcttcctcctacaaccatcacgcctacaactattagcacctcaactactaccactcct
actactacagcctctactactactactaccactcctactactactactactactactgct
actactactacaccttctactaccaccaccgccactccaactgaggcgacaatgaccagc
acacctcctgtgctggtcaccaccaggcatacagatcagaacgtgttggtggtccctggg
cggaagatctggaatctgacggtggagcctaacagtaactacgctaacgtcagctggaaa
cacaacttccctgccggcagcagcgagtttgtgctagagttcacactggacagcgacaag
acggtgaaagttgtatcagtgaaccaacagccccctgttaaagtggcggatctgatcgca
ggtgccaagtaccatctgagagtttactcccatgaactcaacagcatcagcagcaaatat
gtcacctttaagaccaaaccagcctacatagaccaggtggacatcgccactcaagggtgg
tttatcggcttgatgtgcgccatcgccctcatcatactcatcctcctcatcgtctgcttc
ataaagaggagtcgtgggggcaaatatccagtgcgtgacaaaaaagatctgcccttagac
ccagtggatcacaaagaccaggatggatcgtttgattaccacagcgacgaggacaacaag
cctctgcagggcagccagacttcactggacggcaacgtgaaggagagcgacgacagcctg
gtggactacggtgaaggcggcgacggccagttcaacgaggacggctctttcattggtcag
tacacggtgaagaaggacaaggatgagacggagggcaatgagagctctgaggccacttca
ccagtcaatgctatctactcgctggcgtag
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