KEGG   Solea senegalensis (Senegalese sole): 122767576
Entry
122767576         CDS       T07721                                 
Symbol
rae1
Name
(RefSeq) mRNA export factor isoform X1
  KO
K14298  mRNA export factor
Organism
ssen  Solea senegalensis (Senegalese sole)
Pathway
ssen03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:ssen00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    122767576 (rae1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ssen03019]
    122767576 (rae1)
   03036 Chromosome and associated proteins [BR:ssen03036]
    122767576 (rae1)
Messenger RNA biogenesis [BR:ssen03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     122767576 (rae1)
Chromosome and associated proteins [BR:ssen03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    122767576 (rae1)
SSDB
Motif
Pfam: Beta-prop_THOC3 Beta-prop_WDR5 WD40 Beta-prop_EML_2 Beta-prop_WDR3_1st WDR55 WD40_CDC20-Fz WD40_Prp19 WD40_WDHD1_1st Beta-prop_WDR36-Utp21_2nd Beta-prop_WDR3_2nd WD40_Gbeta Beta-prop_CAF1B_HIR1 EIF3I Beta-prop_TEP1_2nd Beta-prop_EML Beta-prop_TEP1_C Beta-prop_RIG_2nd Beta-prop_WDR36-Utp21_1st Beta-prop_Aladin WD40_RFWD3 Beta-prop_EIPR1 ANAPC4_WD40 Beta-prop_ACSF4 Beta-prop_SPT8 NBCH_WD40 ExoI_SH3 Beta-prop_WDR41
Other DBs
NCBI-GeneID: 122767576
NCBI-ProteinID: XP_043878855
LinkDB
Position
LG4:5921678..5928907
AA seq 369 aa
MSLFGTTTGFGTGGTSVFGSTTTDSHNPMKDVEVTSPPDDSISCLAFSPPTLPGNFLIGG
SWANDVRCWEVQDNGQTVPKAQQMHTGPVLDACWSDDGSKVFTASCDKTAKMWDLNSNQA
MQIAQHEGPIKAIHWIKAPNYSCIMTGSWDKTLKFWDTRSPNPMMSLQMPERCYCADVVY
PMAVVATAERGLIVYQLENQPSEFRRIDSPLKHQHRCVAIFKDKQNKPTGFALGSIEGRV
AIHYINPPNPAKDNFTFKCHRSNGTNTTTPQDIYAVNAISFHPVHGTLSTVGSDGRFSFW
DKDARTKLKTSEQLDQPITACCFNNNGNIFAYASSYDWSKGHEYYNPQKKNYIFLRNAAE
ELKPRNKKW
NT seq 1110 nt   +upstreamnt  +downstreamnt
atgagtttgtttgggacgaccactgggtttggaacaggagggaccagtgtctttggaagc
acaacgacagacagccacaatcctatgaaggatgttgaagtgacttcgcctcctgatgac
agcatcagctgcctggctttcagtccgcccaccttaccaggaaatttcctcattggagga
tcgtgggctaatgatgtcaggtgctgggaagtgcaggacaatggacagactgtccccaaa
gcccagcagatgcacacaggtccagtgctggatgcttgctggagtgatgatggtagtaaa
gtgttcacggcttcttgtgacaagacagccaagatgtgggatcttaacagcaatcaagca
atgcagattgcacagcatgaaggtccaatcaaagctatccactggataaaggccccaaac
tacagctgtatcatgactggcagttgggacaaaacactgaagttctgggacacccgctct
cccaatcccatgatgtctctgcagatgccagagagatgctactgtgcagatgtcgtttac
cccatggcggtggttgccacagctgagagaggcctgattgtgtaccaactggagaatcag
ccgtctgaatttcgcagaatagactctcctcttaaacatcagcaccgttgtgtagccatt
ttcaaggacaagcagaacaagcccacaggctttgcactggggagcatcgagggtcgagtg
gccatccactatatcaaccctccaaacccagccaaagacaacttcacctttaagtgccac
aggtccaatggaaccaacacaaccactccacaggacatctacgctgtgaatgctatctcc
ttccatcctgtccatggcacactgtccactgtgggctcggatggtcgcttcagcttctgg
gacaaagacgcccgcaccaagttgaagacatcggagcagcttgaccagcccatcacagcc
tgctgcttcaacaacaatggcaacatctttgcatatgcttccagttacgactggtcgaag
ggccatgagtactacaacccccagaaaaagaactacatcttcctgaggaacgccgcagag
gagctgaagcctcgtaacaagaaatggtga

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