Solea senegalensis (Senegalese sole): 122767576
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Entry
122767576 CDS
T07721
Symbol
rae1
Name
(RefSeq) mRNA export factor isoform X1
KO
K14298
mRNA export factor
Organism
ssen
Solea senegalensis (Senegalese sole)
Pathway
ssen03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
ssen00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
122767576 (rae1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ssen03019
]
122767576 (rae1)
03036 Chromosome and associated proteins [BR:
ssen03036
]
122767576 (rae1)
Messenger RNA biogenesis [BR:
ssen03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
122767576 (rae1)
Chromosome and associated proteins [BR:
ssen03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
122767576 (rae1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_THOC3
Beta-prop_WDR5
WD40
Beta-prop_EML_2
Beta-prop_WDR3_1st
WDR55
WD40_CDC20-Fz
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR3_2nd
WD40_Gbeta
Beta-prop_CAF1B_HIR1
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_EML
Beta-prop_TEP1_C
Beta-prop_RIG_2nd
Beta-prop_WDR36-Utp21_1st
Beta-prop_Aladin
WD40_RFWD3
Beta-prop_EIPR1
ANAPC4_WD40
Beta-prop_ACSF4
Beta-prop_SPT8
NBCH_WD40
ExoI_SH3
Beta-prop_WDR41
Motif
Other DBs
NCBI-GeneID:
122767576
NCBI-ProteinID:
XP_043878855
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All DBs
Position
LG4:5921678..5928907
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AA seq
369 aa
AA seq
DB search
MSLFGTTTGFGTGGTSVFGSTTTDSHNPMKDVEVTSPPDDSISCLAFSPPTLPGNFLIGG
SWANDVRCWEVQDNGQTVPKAQQMHTGPVLDACWSDDGSKVFTASCDKTAKMWDLNSNQA
MQIAQHEGPIKAIHWIKAPNYSCIMTGSWDKTLKFWDTRSPNPMMSLQMPERCYCADVVY
PMAVVATAERGLIVYQLENQPSEFRRIDSPLKHQHRCVAIFKDKQNKPTGFALGSIEGRV
AIHYINPPNPAKDNFTFKCHRSNGTNTTTPQDIYAVNAISFHPVHGTLSTVGSDGRFSFW
DKDARTKLKTSEQLDQPITACCFNNNGNIFAYASSYDWSKGHEYYNPQKKNYIFLRNAAE
ELKPRNKKW
NT seq
1110 nt
NT seq
+upstream
nt +downstream
nt
atgagtttgtttgggacgaccactgggtttggaacaggagggaccagtgtctttggaagc
acaacgacagacagccacaatcctatgaaggatgttgaagtgacttcgcctcctgatgac
agcatcagctgcctggctttcagtccgcccaccttaccaggaaatttcctcattggagga
tcgtgggctaatgatgtcaggtgctgggaagtgcaggacaatggacagactgtccccaaa
gcccagcagatgcacacaggtccagtgctggatgcttgctggagtgatgatggtagtaaa
gtgttcacggcttcttgtgacaagacagccaagatgtgggatcttaacagcaatcaagca
atgcagattgcacagcatgaaggtccaatcaaagctatccactggataaaggccccaaac
tacagctgtatcatgactggcagttgggacaaaacactgaagttctgggacacccgctct
cccaatcccatgatgtctctgcagatgccagagagatgctactgtgcagatgtcgtttac
cccatggcggtggttgccacagctgagagaggcctgattgtgtaccaactggagaatcag
ccgtctgaatttcgcagaatagactctcctcttaaacatcagcaccgttgtgtagccatt
ttcaaggacaagcagaacaagcccacaggctttgcactggggagcatcgagggtcgagtg
gccatccactatatcaaccctccaaacccagccaaagacaacttcacctttaagtgccac
aggtccaatggaaccaacacaaccactccacaggacatctacgctgtgaatgctatctcc
ttccatcctgtccatggcacactgtccactgtgggctcggatggtcgcttcagcttctgg
gacaaagacgcccgcaccaagttgaagacatcggagcagcttgaccagcccatcacagcc
tgctgcttcaacaacaatggcaacatctttgcatatgcttccagttacgactggtcgaag
ggccatgagtactacaacccccagaaaaagaactacatcttcctgaggaacgccgcagag
gagctgaagcctcgtaacaagaaatggtga
DBGET
integrated database retrieval system