Solea senegalensis (Senegalese sole): 122767849
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Entry
122767849 CDS
T07721
Symbol
cpne1
Name
(RefSeq) copine-1 isoform X1
KO
K24526
RNA-binding protein 12
Organism
ssen
Solea senegalensis (Senegalese sole)
Brite
KEGG Orthology (KO) [BR:
ssen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ssen03041
]
122767849 (cpne1)
Spliceosome [BR:
ssen03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
122767849 (cpne1)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_3
Motif
Other DBs
NCBI-GeneID:
122767849
NCBI-ProteinID:
XP_043879296
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All DBs
Position
LG4:complement(18888418..18910252)
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AA seq
902 aa
AA seq
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MAVVIRLQGLPIVAGTMDIRHFFSGLTIPDGGVHIVGGEHGEAFIVFATDEDARLGMMRT
GGSIKGSKVSLLLSSKTEMQNMIELSRRRFEAGAGAVETATPSTGNANRQAGAAPIPTVQ
PGAGGRSGNHGNQGFSNASTTVTAASSTQEPSSNKAVASLASVVPCFPNSYSSTPTITTA
LASLTAGPPPIPSLPSMPSMPPMPTLPTIPVPPPVSSLPPVPTHSPLSQGPPVPPMSHLP
HMSSLPPFNPSLPPPGGLGSGLPLGTPNHMLFNPLSPLASLGLQAHMKAAAAAATGAASP
DELFVLLQNLPFSCSEVEVREFFRGLGVDGVHLLRDGQGRPTGRAVVKFFSPQESFEAVK
RGGGMMGQRFIEIIPSSERQWANLSDNMVDHVSHNISKSNNNCNLQDQQQRRGNVGSGGR
DQRGRSRSPHRQEFSVYLKGLPYEVDKKQIKEFFKNLSVVEDSVYIAYGPNGRATGEGFL
EFKTEQDYKTALGAHMQYMGTRFIQVHPITRKGMHEKIDTIRKREASQSDGKNLDGLKAP
RNCAHITNIPYNISKKDVRGFLEGVGLYEETLKVLTDSHGNGLGQAIFQLRTEDDARKAE
RLHRQKLNGRDAFVHLVTFEQMKEIERNPPPQNKRGQRNQNQQNQNQNQHQQNQPSPQQP
QINPFAGISGEEFNFLRNTMGNLTHPNSGPFVTPFSAPGNGLAGPPPLPPMAAGLGDVSL
GVAPPLVAGLPGAPILEPPGFRPIVGGGAPFSQDGLRGLVPFDNANRKGAGGQNRGGGAN
SNQNRPGGGPTSGQQVFTPGTDSLRNQPAPGGSNNPNSQRVAAGPTIVKLQNMPFTVTVD
EIMDFFYGYQVLPGSVCLQFSEKGLPTGEAMVAFQNHEEASAAVMDLNDRPIGARKVKIS
LG
NT seq
2709 nt
NT seq
+upstream
nt +downstream
nt
atggcagtagtcatcaggctgcagggtctgcccatagtggctggcaccatggacatcaga
cacttcttctctggcctcaccatccctgacgggggagtgcacatcgtagggggtgaacat
ggtgaggcgttcatcgtctttgccactgatgaagatgctcggctggggatgatgcgtaca
ggcgggtcaattaagggatcaaaggtttcgctgttgcttagtagtaagacggaaatgcag
aacatgatcgagctaagccgtcgcaggtttgaggctggtgcaggtgctgttgaaactgct
acaccttcaacaggaaatgctaatcgacaagcaggtgcagctcctatacctacagtgcag
ccaggagcaggcgggagaagtggaaaccatggaaaccaaggatttagtaatgcctccacc
acagtaacggcagcaagctcaacgcaggaaccatcaagcaacaaagcagtagccagcttg
gccagtgtagtaccttgtttccccaacagttatagctccactcccacaatcaccacagct
ctggcatcactcactgctggccccccacccatcccctcacttcccagtatgccctccatg
ccgcccatgcccacattgcccaccattccagttcctcctccagtttcctcacttccccct
gttcctacacactcccctttgtcccaaggacctccagtgcctcctatgtcccaccttccc
cacatgtcttccctgcctcccttcaatccctcccttccacccccagggggactgggttct
ggcctccctcttggaactcccaaccatatgctgtttaatcctctctcccctttggcctca
cttggccttcaggctcatatgaaggccgctgctgctgcagccactggtgcagccagtcca
gatgagttatttgtcctcttgcagaatctcccattctcctgctcagaggttgaggtcagg
gaattttttcggggtctcggtgtggatggagttcatctgctgagggatggacagggcagg
ccaactggtagggctgtggtcaagtttttctcaccccaggagagttttgaagctgtgaag
aggggaggtgggatgatgggccaaaggttcattgagatcatcccatcctctgaacgtcag
tgggccaacctcagtgacaatatggttgaccatgtttctcacaatatcagcaagtcaaat
aacaactgtaatttacaggatcagcagcagcgccgtggtaatgtcgggtctggaggcagg
gatcagcgaggaaggtcacgatctcctcaccgacaggagttctctgtctacctgaagggc
cttccctatgaggttgacaaaaaacagataaaagagttctttaagaatttatccgttgtg
gaggacagtgtttacattgcctatggacccaatgggcgagccacaggagagggcttcctt
gaattcaaaacggaacaggattataagactgctttaggtgctcacatgcagtacatgggc
acccgctttatccaggtccacccaatcactcgaaagggaatgcatgaaaaaattgacacc
atccgcaaacgtgaagcgtcccagagtgatggcaagaatctggatggtttgaaagctcca
aggaactgtgcccatatcaccaatattccttacaatatctctaagaaggatgtacgtggc
ttcttggagggtgtggggctttatgaggaaacccttaaggttctgacagatagccatggt
aatggtttagggcaagctattttccaactgcgtactgaggatgatgcccgcaaagctgaa
agattgcaccgccaaaagctcaatggccgtgatgcatttgtccacctggtaacctttgag
cagatgaaggaaattgagagaaatcctcctcctcaaaacaagaggggccagcgcaaccag
aatcagcagaaccaaaatcagaatcagcaccagcaaaaccagcccagtccccagcagccc
cagatcaatccatttgctgggattagtggggaagaatttaactttctcagaaacaccatg
gggaatctcacacatcccaacagtggcccatttgtgacaccattctctgccccagggaat
gggctggcaggccctccccctctgcctcctatggcagcagggctaggggatgtgagtctg
ggtgtggcgccgccacttgttgctggtcttcctggagctcctatcctggagccaccaggt
tttcgacccattgttgggggaggagctccattcagtcaagatgggcttagagggctggtg
ccttttgacaacgctaacagaaaaggggctggaggacagaacagagggggaggggctaac
agcaaccaaaaccgtccaggtggaggccctactagtggacagcaagtgttcactccagga
actgacagtctccgtaaccagccagctcctggtggatccaacaatcccaatagtcaacgt
gttgctgctggcccaacaattgtaaaactccagaacatgcccttcactgtaacagtggat
gagatcatggacttcttctatggctaccaagtattgccaggctcagtctgcctgcagttc
agtgagaaaggcctgccaactggtgaggcaatggtggccttccagaaccacgaggaggct
tctgccgctgtcatggacctcaatgaccgacctattggcgctcgtaaggtcaagataagc
ctgggctaa
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