KEGG   Solea senegalensis (Senegalese sole): 122767887
Entry
122767887         CDS       T07721                                 
Symbol
rrp9
Name
(RefSeq) U3 small nucleolar RNA-interacting protein 2 isoform X1
  KO
K14793  ribosomal RNA-processing protein 9
Organism
ssen  Solea senegalensis (Senegalese sole)
Brite
KEGG Orthology (KO) [BR:ssen00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:ssen03009]
    122767887 (rrp9)
Ribosome biogenesis [BR:ssen03009]
 Eukaryotic type
  90S particles
   Other 90S particles
    122767887 (rrp9)
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_WDHD1_1st Beta-prop_TEP1_2nd Beta-prop_EML_2 WD40_CDC20-Fz WDR55 Beta-prop_EML Beta-prop_CAF1B_HIR1 EIF3I WD40_MABP1-WDR62_2nd Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_1st NBCH_WD40 Beta-prop_WDR75_1st Beta-prop_TEP1_C Beta-prop_IFT122_1st Beta-prop_SCAP WDR90_beta-prop_4th Beta-prop_IP5PC_F Beta-prop_DCAF4 Beta-prop_IFT140_1st Beta-prop_SPT8 Beta-prop_Vps41 Beta-prop_DCAF12 Beta-prop_WDR75_2nd WD_LRWD1 Beta-prop_WDR19_1st Beta-prop_NWD2_C WDR54 Beta-prop_BBS7 Beta-prop_RIG_1st
Other DBs
NCBI-GeneID: 122767887
NCBI-ProteinID: XP_043879370
LinkDB
Position
LG4:complement(23480410..23485206)
AA seq 485 aa
MSSFFIKSKVNPKLSKQGKNTAAIKRKSDGDSGAKSKMRAKKPSSKYNEEISSDSEPESS
KVPRKRQPKEDNDYAETPQEKKLRLAKLYLEQLKDAEERNAEDEDFETDLVAGKLEEEVL
EQKGKLQRLIAKDLIEPDASEIRVLRGHKLPITCLVISPDDKHIFSAAKDCSIIKWDVEI
GKKMHTIPGGRKGTEDRHVGHTAHILCMTISSDGKYLATGDMNKLIMIWEAETCQHLYKF
TGHKGPVSGLSFRKGSHDLYSASHDRSVKVWNVAENAYVETLFGHQDAITGLDCLSRERC
VTAGGRDRSVRVWKIAEESQLVFHGHEGSIDCIQLINEEHMITGADDGSVALWSVNKKKP
LCIVKQAHGCHGDVEAKQPHWVASVAALQNSDTVASGASGCSHNSQVQLWKCGQNYRGLQ
RLFSVPVSGFINSLKFSSSGQFLVAGVGQEHRLGRWWRLKEAKNGIYIIPLKRKSPNPEE
PKVDE
NT seq 1458 nt   +upstreamnt  +downstreamnt
atgtcgtcttttttcataaagtcaaaagtaaatcccaaactatcaaaacaggggaaaaat
acagcggcaatcaaacgaaagagtgatggagattccggtgctaagagcaaaatgcgagcg
aaaaaacccagctccaaatataacgaagaaatttccagcgactctgagccagagagttct
aaagtgcccaggaagaggcagcccaaggaggataatgattatgcggaaacgccacaagag
aagaagctcagactggccaaactttacctggaacagctgaaggacgcagaggagaggaac
gctgaagacgaggacttcgagactgatctggttgcaggaaaacttgaagaagaagtgctc
gaacagaaaggaaaacttcagcgacttattgccaaagatctcatagagccagatgcttca
gagatacgagttttacgaggacacaaacttccaatcacctgtctggtcatatctcctgat
gacaagcacatcttctctgctgccaaagactgctccatcattaagtgggatgttgagatt
ggcaagaaaatgcacacaatacctggtggaaggaaaggcacagaggatcgacacgttgga
cacacagctcacatcctatgcatgaccatatcatcagacggaaaatacttagcaaccgga
gacatgaacaaactgatcatgatttgggaggcagaaacctgccaacatctttataaattc
acaggacacaaaggcccagtgtcgggtctctcgttcaggaagggatctcatgatctgtac
agcgcgtctcatgaccgttcggtcaaggtctggaacgtggccgaaaacgcatatgtggaa
actctgtttggacatcaggatgccatcacagggctggactgtttaagccgcgagcgctgt
gtgacggcgggaggacgcgatcgttctgtgagggtgtggaagatagccgaggagtctcag
ctcgtcttccacggccacgaaggttcaatcgattgtatccaactcataaatgaggagcac
atgataacgggagccgacgacgggtcagtggctctttggagcgtgaacaagaagaagcct
ctgtgcatcgtaaagcaggctcacggttgccatggcgacgtggaggcgaagcagcctcac
tgggtcgcttcagtcgcggcgcttcagaactcggataccgtagcttcaggtgcctctggc
tgttcacacaactcacaggtgcagctctggaagtgtggccagaattaccgtggtctgcag
cgtctcttcagcgtccccgtgtctggtttcatcaacagcctgaagttctccagcagcggt
cagttcttggtggcaggagtcggacaagagcacaggttgggtcgatggtggagacttaaa
gaggccaagaatgggatctacattattcctctcaaaaggaagtcacctaatccggaggaa
cctaaggtggacgaatga

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