Solea senegalensis (Senegalese sole): 122767987
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Entry
122767987 CDS
T07721
Name
(RefSeq) E3 ubiquitin-protein ligase TRAIP
KO
K11985
TRAF-interacting protein [EC:
2.3.2.27
]
Organism
ssen
Solea senegalensis (Senegalese sole)
Brite
KEGG Orthology (KO) [BR:
ssen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ssen04121
]
122767987
Enzymes [BR:
ssen01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
122767987
Ubiquitin system [BR:
ssen04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
122767987
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4_2
zf-rbx1
zf-C3HC4
zf-C3HC4_3
zf-RING_UBOX
zf-ANAPC11
zf-RING_11
zf-C3HC4_4
zf-RING_5
Crescentin
zf-RING_Vps41
TSNAXIP1_N
DUF2968
RING_XB3-XBAT31
zf-RING-like
Zn_ribbon_8
WEMBL
COG3_N
zf_RING_Vps8
SWIRM-assoc_1
EzrA
USP8_interact
FANCL_C
TraV
Spectrin_Anc-1
zf-Nse
SLX1_C
CENP-F_leu_zip
MAD
RINGv
DUF4407
Motif
Other DBs
NCBI-GeneID:
122767987
NCBI-ProteinID:
XP_043879519
LinkDB
All DBs
Position
LG4:4282121..4290237
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AA seq
449 aa
AA seq
DB search
MPIRAYCTICSDFFDHSKDVAAIHCGHTFHYQCLLQWFQTAPSKTCPQCRKQVSTRHIIT
KLYFDIGVEEEGTVDPESLQNELDQMKARLSSKEQEWWDKQKVMDSLKEMVDKQRRDLDN
GRKEIMEKEMLCSALRKQMMYLETQKNDSQAAKEEIQRLRTKMKTFESMDTLLQGHRAEV
ESMIRDMGVGHAAVEQLSIYCVSLKKEYDNLKGGLKSSHDMCEKLKKELLSSTNKLQKAS
VEVNQTKEEMKSLQNDQANAYKEISSLKKKVEFLQKTLRTPTRTNETINRLIFESPAPLE
LKQPRFHQASDSEDVDLNMTYDVTTPDDTAKKSTKVPSKKMRLDPHSMSMSKHNEKSSSL
TKVQQEDGSMDPFFRNSLLFRKKTFGSMLEPQRKPGAVRTGYDGLGGRTKFIQPSPLAQI
RPLIKVKRKKVTRPPPKIETCLTLDSFLE
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atgcctatccgagcatattgtacaatttgctctgacttcttcgatcactccaaagatgtc
gctgccatacactgcggacacacgttccactatcaatgcctgctccagtggtttcagaca
gctcccagtaaaacctgtccacagtgcaggaaacaggtcagcaccagacacattatcacc
aagctgtactttgacattggtgtagaggaggagggtacggtggacccggaaagtttgcag
aatgagcttgatcaaatgaaggctcggctaagctctaaagagcaagaatggtgggacaaa
cagaaagtgatggacagtttgaaggagatggtggataagcagaggagagatctggataat
ggaagaaaggagataatggaaaaggagatgttgtgctctgctctcagaaagcagatgatg
tatctagagacacaaaagaatgacagtcaggctgccaaggaggagatccagagactcaga
actaaaatgaagacttttgaaagcatggataccctgttacagggtcacagggcagaagtg
gagtccatgatcagagatatgggtgtcggccatgcggcagtggaacagctctccatctac
tgcgtctcactcaaaaaagagtacgataacctgaaaggaggcctgaagtcttcacatgac
atgtgtgagaagctgaagaaagaattgctctcctccaccaacaagttacaaaaagcttca
gtggaggtgaatcagaccaaggaggagatgaagtcactgcagaacgatcaggcaaatgct
tacaaagagatctcaagtctgaagaagaaagtagagttccttcagaagacgctgagaacg
ccgacacggacaaatgaaaccattaatcggctcatctttgaaagccccgcccctctggag
ctgaagcagccgcgcttccaccaagccagcgatagtgaggacgtcgacctcaacatgact
tacgacgtcactacaccagatgacactgccaagaagtcaacgaaggtcccatctaagaag
atgcgtcttgaccctcactcgatgtccatgtcaaaacacaatgaaaaaagttcatctttg
actaaggttcaacaagaggatggatctatggatccgtttttcaggaactccctccttttc
cgcaaaaagacctttggcagtatgttggagccgcagaggaagcccggagctgtgagaact
ggttatgatgggctaggaggcagaaccaaattcattcaaccttctcctttagcacagatt
cgcccgttgataaaagtgaagaggaaaaaggtgaccaggcctccacccaagattgaaact
tgcctgactctggacagcttcctcgagtga
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