KEGG   Solea senegalensis (Senegalese sole): 122768110
Entry
122768110         CDS       T07721                                 
Name
(RefSeq) dihydropyridine-sensitive L-type skeletal muscle calcium channel subunit alpha-1-like isoform X1
  KO
K04857  voltage-dependent calcium channel L type alpha-1S
Organism
ssen  Solea senegalensis (Senegalese sole)
Pathway
ssen04010  MAPK signaling pathway
ssen04020  Calcium signaling pathway
ssen04260  Cardiac muscle contraction
ssen04261  Adrenergic signaling in cardiomyocytes
ssen04270  Vascular smooth muscle contraction
ssen04912  GnRH signaling pathway
Brite
KEGG Orthology (KO) [BR:ssen00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04010 MAPK signaling pathway
    122768110
   04020 Calcium signaling pathway
    122768110
 09150 Organismal Systems
  09152 Endocrine system
   04912 GnRH signaling pathway
    122768110
  09153 Circulatory system
   04260 Cardiac muscle contraction
    122768110
   04261 Adrenergic signaling in cardiomyocytes
    122768110
   04270 Vascular smooth muscle contraction
    122768110
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04040 Ion channels [BR:ssen04040]
    122768110
Ion channels [BR:ssen04040]
 Voltage-gated cation channels
  Calcium channel, voltage-gated (Cav)
   122768110
SSDB
Motif
Pfam: Ion_trans Ca_chan_IQ GPHH PKD_channel
Other DBs
NCBI-GeneID: 122768110
NCBI-ProteinID: XP_043879776
LinkDB
Position
LG4:15015468..15049974
AA seq 1681 aa
MSRFLEYHHFKENLAQSFFLEAEMADSSSPPLSSYIMDEETLKRKQKEKLKKLMATGGNP
RPARSLLFLSLKNPFRKACISIVEWKPFEIIILLAIFANCVALAVYLPMPEEDSNNTNSN
LESLEYIFLIIFSIECFLKIVAYGFLFHADAYLRNCWNILDFVCVSVGLFTVAVDAINHL
SGVEAPVGEKGGGFDMKALRAFRVLRPLRLVSGVPSLQVVMNSILKSLLPLFHITLLVLF
MVTIYSIMGLELFKCKMHKTCYYKGTNIIATVENEKPAPCAQAGNGRRCGINGTECRAGW
PGPNNGITHFDNLGFAMLTVYQCITTQGWTDVLYWVNDAIGMEWPWIFFTTLILVGSFFV
LNLVLGVLSGEFTKEREKAKSRGEFQKLRETQQLDEDLKGYMEWITHAEVIDNDQEGQGL
LHTENGGLETGSVGKMDTMQLIIYYYKLARKWNRWLRRKCRVYVKSRLFYWWVIMLVFLN
TLAIATEHHKQSQKITNWQDNANKLLLSMFAIEMFMKMYALGLPSYFMSLFNRFDCFVVS
TGIMELILVHMGVMSVMGISVLRCIRLLRLLKVSRYWTSLSNLVASLLNSVRSIACLLLL
LFLFIVIFSLLGMQVFGGKFNFPNQTKPRSTFDSFPQALITVFQILTGEDWNAVMYDGIM
AHGGPSMPGILVSIYFIILFVCGNFILLNVFLAIAVDNLAEAESLTLAQKEKAEEKNRKK
ALRASIPDKVSEEKANLAKKLAEQRAKGIECMPTTAKLKIDEFESNVNEIKDPFPPADFP
GDDEEEDPDIPESPRPRPMADLQLKEEAVPMPEASSFFIFGPQNKFRKLCHRIINATTFT
NIILLFILLSSVSLAAEDPIDPMSFRNQVLAYADIVFTSVFTAEIVLKMTTYGAILHKGS
FCRNSFNILDLLVVSVSLLSMGMESSAISVVKILRVLRVLRPLRAINRAKGLKHVVQCVF
VAVKTIGNIVLVTMLLDFMFACIGVQLFKGKFYACTDPDKMTEEICKGSYIRYQEEALHE
MVVRDRKWTNSELNFDNIFNGMLTLFTISTFEGWPKILYKAIDSNLEDKGPVYNNRVAIS
IFFIVYLILIAFFMMNIFVGFVIVTFQEQGEQEYKNCELDKNQRQCVQYALKARPLRCYI
PKNPYQYQVWYIVTSCYFEYLMFLLIMLNTMCLGMQHCNQSAHVTHLSDMLNMIFTVLFT
VEMILKLMAFKAKGYFGDPWNVFDFVIVIGSVVDVMLSEIDAALASSGGLYCLHGCAAVD
PMQAIASSENMSVSITFFRLFRVMRLVKLLNRSEGIRNLLWTFIKSLQALPYVALLILML
FFIYAVVGMQIFGKIALVDGTYINRNNNFQTFPQAVLLLFRCATGEAWHEVMLGCMYGKR
CDPKSDYLPGEEYTCGSNFAIIYFMSFYMLCAFLIINLFVAVIMDNFDYLTRDWSILGPQ
HLDEFKKIWAEYDPEATGRIKHLDVVTLLRRIPPPLGFGKFCPHRIACKRLVSMNMPLNS
DGTVTFNATLFALVRTALKIKTEGNFEKANEELRAIIKKIWKRTSMKLLDQVIPPIGDDE
VTVGKFYATFLIQDYFRKLKKRQEEYYGYRPTKKSATHEIQAGLRNIEEEAAPELHRTIS
GDLITEEDMDRAIDETAEETPFRRHSLFGNHSDPFFVEASGNQATHQRPLQMAEGVMNSI
I
NT seq 5046 nt   +upstreamnt  +downstreamnt
atgtcaagatttctggaataccaccacttcaaggaaaacttggcacaatcgttttttctt
gaagcagaaatggcagacagcagcagtcccccgttgtcatcctacatcatggatgaggaa
acgctgaagagaaaacaaaaggagaagctaaagaagttgatggcgacggggggcaaccca
agacctgctcgctctctccttttcttgtcactgaaaaatcctttccgcaaggcgtgcatc
agtattgtggagtggaaaccttttgagatcatcatcctactggccatctttgccaactgt
gtggctctggctgtgtacttgcccatgcctgaggaagacagcaacaacaccaacagcaac
ctggaaagcctggagtacatcttcctcatcatcttctctatcgagtgtttcctgaagatt
gttgcctatggatttctattccacgctgacgcatatttaagaaactgctggaacattttg
gacttcgtttgtgtatctgttgggcttttcactgtggctgtggatgccattaaccacctc
agtggagtggaggctccagtaggtgaaaagggtggtggctttgacatgaaagctttgcgt
gcattcagagtacttcgacctctgagactggtctctggagtccccagtttgcaagtggtg
atgaactccattctgaagtccctgctgccactctttcacatcactttgctggtccttttc
atggtcaccatttactctataatgggtctggagctcttcaagtgcaaaatgcacaagacc
tgctactacaaaggcacaaacataattgcaacagtggagaatgaaaagcctgctccatgt
gctcaagcgggaaacggtcgccgttgtggcataaatggcacagagtgtcgtgctggttgg
ccaggcccaaacaatggaatcacccactttgacaacctaggctttgctatgttgactgtc
taccagtgtatcaccacacaagggtggactgatgtcctgtactgggtaaatgatgctata
ggaatggaatggccatggatttttttcaccaccctcatcctggttggctccttctttgtg
ctcaacctggttctgggtgtgctcagtggtgaattcacaaaagagcgagagaaggccaag
tcacgtggagagtttcaaaagctaagagaaacacagcagctagatgaggatctcaaaggt
tatatggagtggattactcatgctgaggtcattgacaatgaccaggagggacagggtctg
ctccacacggagaatggaggattggagacgggaagtgtaggaaaaatggatacaatgcag
ctgatcatctattactataagttggcccgtaagtggaatcgatggttaaggcgtaaatgc
agagtgtatgtgaagtccagactgttctactggtgggtgatcatgctcgtctttctcaat
acattggccatcgcaacagaacaccacaagcagtctcagaaaatcacaaactggcaagac
aatgccaataagctactgctgtctatgtttgccattgagatgttcatgaagatgtatgct
cttggcttgccctcatacttcatgtccctcttcaaccgctttgactgctttgtggtgtct
actggtattatggagctcattcttgtccacatgggcgtcatgtcagtcatgggtatctct
gtgctccgctgcatacgtctcctccgtctgcttaaagtcagtagatactggacgtctctc
agtaatctggtggcttccctcttgaactcggtccgttccattgcctgtttgctgctgctc
ctcttccttttcattgtcatcttctccctgctgggtatgcaggtatttggagggaagttc
aactttcccaatcaaaccaaaccgcgcagcacctttgacagctttcctcaggccctcatt
acagtgttccagatcctgacaggtgaagactggaatgccgtcatgtatgatggtattatg
gctcatggtggacctagcatgcccggaatactagtcagtatctacttcatcatcctcttc
gtctgtggaaatttcatcctcctaaatgtcttcctggccattgctgttgataatttggca
gaggcggagtctttgactttagcacagaaggagaaagcagaggaaaagaatcgcaagaaa
gcactcagggcaagcatacctgataaagtatcagaagagaaagcaaacctggcgaagaag
ttggctgagcaaagggctaaaggcatcgagtgcatgcctaccactgccaagctcaagatc
gatgagtttgagtcaaacgtcaatgagattaaggaccctttccctccagcagactttcca
ggtgatgatgaggaagaggaccctgatataccagaaagccccagacctcgtccaatggca
gatctgcagttgaaggaggaagccgtgccgatgccagaagccagttctttttttatcttt
ggacctcagaacaagttccggaagctctgccatcgtattattaatgcaaccaccttcacc
aacatcatcctcctcttcatcctgctgtcatcggtttctttagcggctgaggatcccatt
gaccctatgtctttcaggaaccaggtgttggcctatgctgatatagtcttcacttcggtg
ttcacagcagaaattgtgctcaagatgacaacatacggggccattcttcacaaagggtcc
ttctgcaggaactcctttaacatcttggatcttctggtggtcagtgtgtctctcctctca
atgggcatggaatccagtgccatctcagtggtgaaaattctcagagtgttgagggtgctt
cgacccttgagggctataaacagagccaagggactgaagcatgtagttcagtgtgtgttt
gtggctgtgaagaccatcggaaacattgtactggtcaccatgcttctagacttcatgttt
gcctgcattggagtccaacttttcaaaggcaagttctatgcctgtacggatcctgacaaa
atgactgaggaaatatgcaaaggttcctacatacggtaccaggaagaagcacttcatgaa
atggtggtccgtgacaggaaatggaccaactctgaactaaactttgataacatcttcaat
ggcatgctgactctcttcaccatttctacctttgaaggatggccaaagatactctataaa
gctattgattcaaacttagaggacaaaggcccagtatacaacaaccgagtggccatctcc
atcttctttatcgtctacctcatcctcatcgccttcttcatgatgaacatatttgtgggc
ttcgtcatcgttaccttccaggagcaaggagagcaagaatataagaactgtgagctggac
aaaaaccagcgccagtgtgtgcagtatgcacttaaagctcgaccactgcgatgttatatt
cccaagaacccctaccagtatcaagtttggtacatcgtcacttcctgctactttgagtac
cttatgttcctgcttattatgctgaacaccatgtgtctgggaatgcagcactgcaaccag
tcagcccatgttactcacctgtctgacatgctgaacatgatcttcactgtgctcttcact
gtggagatgatcctcaaactcatggctttcaaagccaagggttactttggagatccctgg
aatgtttttgactttgtcatcgtcattggaagtgttgtggatgtgatgctgagtgaaatt
gatgcagcactggcctcctctggaggactttactgtctccatggctgtgctgcagtggat
cccatgcaagcaattgcttcttctgagaacatgagtgtgtcaatcacattcttcagactg
tttcgcgtaatgcgtctggtgaaactgttgaatcgctccgagggaataaggaaccttctg
tggaccttcatcaaatcccttcaggctcttccttatgtagcactgctcatccttatgctg
ttcttcatatacgctgtggttggaatgcagatatttggtaaaattgcattggttgatgga
acatacatcaacaggaacaacaactttcagacattcccacaggctgtgctccttttattc
agatgtgccacaggggaggcctggcatgaagtcatgttagggtgcatgtatgggaagagg
tgtgaccccaagtccgattacctgcctggggaagaatacacgtgcggatccaactttgcc
atcatctacttcatgagtttctacatgctctgtgcctttttgatcattaacctgtttgtg
gctgtcatcatggataactttgactacttgacacgggattggtccattcttggtcctcag
cacttggatgagtttaagaaaatctgggctgaatatgaccctgaagctacaggtcgtatt
aagcaccttgatgtggtgacacttctacggagaatacctccacctttaggatttggcaag
ttttgtccacatcgcattgcctgcaagaggttggtctccatgaacatgcccctcaacagt
gatggaactgtaaccttcaatgccacactatttgccctggttagaactgcactgaaaata
aagacagaaggtaactttgaaaaagccaacgaggagctgagggcaataataaagaaaatc
tggaagcgcactagtatgaaactactggatcaagtcatccctcctattggagatgatgag
gtgacagtgggaaagttctatgccactttcttaatccaggattattttaggaaattgaaa
aagagacaggaagagtactatggctacaggcccaccaagaaaagtgctacccatgaaata
caggcaggactgaggaatattgaggaagaggcagctccagaactccataggaccatttct
ggagacctaataactgaagaagacatggaccgagcaattgatgaaactgctgaggagaca
cccttcaggagacatagtctctttggaaaccactcagatcctttctttgttgaggcctct
ggcaaccaggccactcaccagcgccccctacagatggctgaaggagtcatgaatagcatt
atataa

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