Solea senegalensis (Senegalese sole): 122768145
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Entry
122768145 CDS
T07721
Name
(RefSeq) protein polybromo-1-like isoform X1
KO
K11757
protein polybromo-1
Organism
ssen
Solea senegalensis (Senegalese sole)
Pathway
ssen03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
ssen00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
122768145
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ssen03021
]
122768145
03036 Chromosome and associated proteins [BR:
ssen03036
]
122768145
Transcription machinery [BR:
ssen03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
122768145
Chromosome and associated proteins [BR:
ssen03036
]
Eukaryotic type
Chromatin remodeling factors
PBAF complex
122768145
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bromodomain
BAH
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
122768145
NCBI-ProteinID:
XP_043879848
LinkDB
All DBs
Position
LG4:23603490..23616043
Genome browser
AA seq
1642 aa
AA seq
DB search
MSSSKRRRATSPSSSVSGGADLDDTSSTPGSGRKRRKVSNVPPVDMIAVCHELFNAVRDH
KDDHGRQLSDVFLRVPKRRNQPDYYDAVAQPIDMTKIQHKLKSEDYSDVEQLTADFHLMF
NNARSFYKSDSEVYQAACKLWEVYLQTRSEFVQPGDGDEDDEDAEDMMDTPGMSTEEETS
TGSLKEVLEQLLEAIVSHTDPSGHLVSELFQKLPSKVHYPDYYAIIKEPIDLRTIAQRIQ
IGYYKSINAMAKDVDLMAKNAKTYNEPGSQVFKDANTIKKVFIQRKTELEHAEPTKSSLR
IRNRRSGHGDRLSGVSVALHYGSESEDDPVLSGSVCYDEGESEAESQSSSMEMSNPIFQL
YEAVRGARNSQGQVFSEPFQQLPSRREYPDYYQQIKQPVALQQIRAKMKNGEYESVEQID
ADLNLMFENAKRYNMPNSSIYKRAFRLQQIMQSKKRDLLRRDDVDEDSILSSDTGSVKKK
SHKKNVKKNRMKALYAAVIEAKEVGTSRRLCDLFMVKPSKKDYPDYYKVILEPMDLKTIE
HNIRNERYATEDALMDGMKLMFRNARHYNEEGSQVYNDANVLEKILLDKRKELGPSPGEE
DMGSPKLKLRKTGVSPKKSKYLTPLQQKLNELYDAVRNFTDRRGRRLSTIFLRLPSRSEL
PDYYATIKRPIDMERLRSHMVAGRYQDVEALVEDFALMFNNACIYNEPESLIYRDALVLH
RVLLETRKQQEGAEDLGPPAVGPLVRELIRNLFVSVLGHQDEEGRCYSDSLAEVPVVDPA
APEKPPLNFDIIRINVERGRYRRLDVFQEHMFEVLEKARRLNRTDSEIFEDAVELQQFFI
KIRDELCKNGEILLSTALNFTLKHLHNDVEQEKREKIPKELEDDKEKKEEEEENKDEEKA
ADLPGEIWQPDSEEDRVYSQHCKFENTIYHVGDFVYVEPSEPNLKPHIVCIERLWEDDAG
EKWLYGCWFYRPSETFHHATRKFLEKEVFKGDYYNRASISKVLGKCVVMFVKDYFKMQPE
GFRAEDVYICESRYTARNKFFKKIKLWAMPVSSVKLVPREVPLPVVRVASMFAKPDLDKL
TVSCADGGSFVDKEKENVPMEMTGAEPGCQYYEQLLCNNMWFKVGDCVYIQSHGLSKPRV
ARIEKLWVQNGTTFFFGPIFIHPEETEHEPTKMFYKREVFLSHLEETLPITCVIGKCMVS
SFKDYLSCRPTEISEDDILLCESRYIETEKQVKKFKGLKRFSYTAKVVEDENYYFRKVIV
PQKEASPFLNKKIEELEVKLADLEDADDLEDMDDEEDAPQTPSMPQMQTPLASDMDSMPY
TPSQSTPKVKGLSKKEGAKRKINMSGYILFSSEMRAVIKARHPDYSFGELSRLVGTEWRN
LEASRKADYEERAAKIVEQQDRERPPQKQASPRAGTPVGAMMGVVPSPSTMGMINQTMTP
VSGMMGAYGPPYMSMQGPHEGLLSVATMSPHPAGGPYLHPHHLQQGMPGYPGIPYQGMMG
TGMNGMAGSPAPGNFMQQPGMFSPGQHAPPPPPYPGQGQPSHLQPTTPMFVAPPPKTQRV
LHSEAYLKYIEGLNSESSTVSKWDQTLKAQRRDAHLTKEQESRLPSHWLKSKGAHTTMAD
ALWRLRDLMLRDSLNICQAYKL
NT seq
4929 nt
NT seq
+upstream
nt +downstream
nt
atgtcgagctccaagaggagaagagccacttcaccctccagcagtgtgagcggaggggca
gacctcgacgatacctcctctactcctggaagtggcagaaaaagaagaaaagtctccaat
gttcctcctgtcgacatgatcgctgtgtgccacgagctgtttaatgctgtcagggatcac
aaggacgatcatggaagacaactcagtgatgtttttctaagggtaccaaagagaaggaac
cagcctgattattatgatgccgtggctcagccaatcgatatgacaaaaattcagcataaa
ctcaagtcagaagattacagtgatgtggaacagcttactgcagatttccatctcatgttc
aacaatgcccggtcgttctataagagtgacagtgaggtgtatcaagctgcatgcaagctg
tgggaggtttatctacaaacaaggagtgagtttgtgcagcctggtgacggagatgaggat
gatgaagatgctgaggatatgatggatactccaggaatgtcaactgaggaagagacctca
actggtagtttgaaggaggtgttggagcaactcttggaggctatagtgtcacacactgat
ccctcagggcatctggtcagcgaactgttccagaaactcccttccaaagtgcattaccca
gactactatgccattataaaggagccaatcgatttgaggacaattgctcaaaggatacag
attggatactataaaagtatcaacgctatggccaaggatgttgacctcatggccaaaaat
gccaaaacttacaatgaaccaggatctcaggtttttaaggacgccaacaccataaagaaa
gtcttcatccagagaaagactgaacttgaacatgctgaacccactaaatccagtctgcgc
atcagaaatcgcaggtctggccatggtgaccggctttctggtgtcagtgtagctcttcac
tatgggtcagagagtgaggatgaccctgttctctctggctctgtgtgctatgatgaggga
gagtcggaggctgagagtcagagttccagtatggagatgagcaacccaatcttccagctg
tatgaagctgtcaggggcgcgaggaacagccagggtcaggtcttctctgaacctttccag
cagctcccctctcgcagggaatatcctgattattaccagcagattaaacagcccgtcgcc
ctgcagcagatcagggcaaagatgaagaatggggagtatgaaagtgtggaacagatagat
gcagacctcaatttgatgttcgaaaatgcaaagcgctacaacatgcccaactcgagcatt
tacaagcgggccttcaggcttcagcagatcatgcagtccaaaaaaagagaccttctaagg
agagatgatgtggacgaggacagcattctgtcatctgatacagggagcgtcaagaagaaa
agccacaagaaaaatgtcaaaaagaatcgaatgaaagccctatacgctgcagtgatagag
gccaaggaggtcggcaccagtcggcgtctctgtgatctttttatggtcaaaccttccaaa
aaggattaccctgactactataaggtcatcctggagccaatggacctgaagacaattgag
cacaacattcgcaatgagcgctatgccaccgaggacgctctaatggacggcatgaaattg
atgttccgcaacgccaggcattacaatgaggagggatctcaggtttacaatgatgctaat
gttctggagaagatactgttggacaaacgcaaggagttgggaccttccccaggagaagag
gacatgggctctccaaaactgaaactaagaaagactggtgtttctccaaagaagtccaaa
tacctcacacccctccagcagaagttgaacgagctctatgacgcagtgcgaaacttcact
gatcgcagaggacgtcgcctgagcacgatattccttcgcctgccatctcgttccgagctg
cctgactactatgccaccattaagaggcccatcgacatggagcgcttgcggagtcatatg
gtggctggtcgttaccaagatgttgaggcactagtggaggactttgctctcatgttcaac
aatgcctgcatttacaatgagccggagtccctgatctatcgggacgctctggtattgcac
cgtgtgctgctggagacacgtaagcagcaggaaggagccgaggacttggggcctccagct
gtgggacctctggtgcgggagctgatcaggaacctgtttgtgtcggtgttaggccaccag
gacgaagaaggccgatgctacagtgactcactggccgaggttcctgttgtggatcctgcc
gctcctgagaagccaccacttaactttgatattatacggataaatgtggagcgaggacga
tacagaagactggatgttttccaagaacacatgtttgaagtgttggagaaggcacggagg
ttaaacaggactgactcagagatatttgaggatgcagtggagctgcaacagtttttcatt
aagatcagggatgagctatgcaagaatggagaaattctactttctactgccctgaacttc
acattaaaacacctgcacaatgatgtggagcaagagaagagggaaaaaattccaaaagag
cttgaggatgacaaggaaaaaaaggaagaagaggaggaaaataaagatgaggagaaagca
gcagacctcccgggagaaatatggcagccagattcggaagaagaccgtgtttacagccag
cactgcaagtttgaaaacaccatctaccatgtgggggactttgtctatgtggagccgtca
gagccgaatctgaagccacacattgtctgtattgaacgcctgtgggaggatgatgcaggt
gagaagtggctctatggttgctggttctacagacccagtgaaaccttccaccatgccaca
cgcaagtttttggagaaagaggtcttcaagggcgactactacaacagagcatccatcagc
aaagtcctaggcaaatgtgtggtcatgtttgtgaaagattacttcaagatgcagcctgaa
gggttcagagctgaggatgtgtacatctgtgagtcccgctacactgccaggaacaagttc
ttcaagaagatcaagctgtgggccatgcctgtgagctccgtgaaattagtccctcgagag
gtgcctttgcctgttgtccgcgtagcctccatgtttgccaagcccgatctggacaagctc
acagtttcatgtgcagacggtggcagttttgtggacaaggagaaagagaatgtccccatg
gagatgactggagctgagcctggctgtcagtactatgagcagctactctgcaacaacatg
tggtttaaagtgggtgactgtgtttacatccagtctcacggtctgtcaaagccccgggtt
gccaggatagagaagctgtgggttcagaatggaactacttttttctttggaccaatcttc
attcatcccgaggaaactgaacacgagccaacgaagatgttttacaagcgagaagttttc
ctgagccaccttgaggagaccttgcctataacctgtgtcataggcaaatgcatggtttct
tcctttaaggattacctgtcatgcagacccactgagatttcagaagacgatatcctgctg
tgtgaaagccgctacattgagaccgagaagcaggtgaaaaagttcaagggtcttaaacgc
ttttcatacactgccaaagtagtggaggatgagaactactacttcaggaaagtgattgtg
ccgcagaaggaagcgtcaccctttttgaacaagaagattgaagagcttgaggttaaactg
gcagacttagaagatgcagatgatctggaagatatggacgatgaggaggatgctccacag
accccttctatgcctcagatgcaaactccacttgctagtgatatggacagtatgccgtac
actccttctcagtccactcctaaagtgaagggcttatcaaagaaggaaggagctaagcga
aagatcaacatgagtggctacatcctgttcagcagtgaaatgcgagcagtcatcaaagct
cggcacccagactactcctttggagagctcagtcgacttgtgggcaccgagtggaggaac
cttgaagcttccaggaaagctgactatgaagaacgtgcagccaaaatagtggagcaacaa
gatcgtgagaggccaccacagaagcaagcgtcccctagagcaggtacccctgtaggggca
atgatgggagtggtgccttcgcctagcacaatgggaatgataaaccagaccatgacacct
gtgtcaggcatgatgggagcttatggcccaccctacatgtccatgcagggcccccacgag
ggcttgttgagtgtggcaacaatgtcacctcaccctgcaggggggccctacctgcatcct
caccatctccagcaaggtatgcccgggtaccctggcattccgtatcagggtatgatgggc
actgggatgaatggcatggcaggaagtcctgcaccaggaaactttatgcaacagcctggc
atgttcagcccaggacagcatgcgccgcctcctcctccatatccaggacagggccaaccg
tcgcacctgcagcccaccactccaatgtttgtggctccaccaccaaagacccaaagagtg
cttcactcggaggcctacctcaagtacattgagggcttgaattcagagtcttccactgtc
agcaagtgggatcaaacgcttaaagctcaaaggcgagatgctcatctgactaaagagcag
gagagccgactgccatctcactggctgaagagcaaaggagcccacaccacgatggcggac
gcactgtggcgcctgcgtgacctaatgctgagagactctctgaacatctgtcaggcatac
aaactgtaa
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integrated database retrieval system
