Solea senegalensis (Senegalese sole): 122768250
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Entry
122768250 CDS
T07721
Name
(RefSeq) flocculation protein FLO11
KO
K19553
homeobox protein TGIF2
Organism
ssen
Solea senegalensis (Senegalese sole)
Pathway
ssen04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
ssen00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
122768250
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ssen03000
]
122768250
Transcription factors [BR:
ssen03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
122768250
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
Motif
Other DBs
NCBI-GeneID:
122768250
NCBI-ProteinID:
XP_043880036
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Position
LG4:complement(10407011..10414592)
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AA seq
603 aa
AA seq
DB search
MKAFKRALEEEHRPEQDHSSAMSDSDDGSPLDLSGRGLLGKRRRRGNLPKEAVQILRSWL
YEHRFNAYPSEQEKLSLSGQTNLSVLQICNWFINARRRLLPDLLRKDGKDPAKFTISRKI
GGKSEGNSSNGGGASSPERNSSPSSSQLRPSVIRSAPTLDLSLLGNTATAILTGAGYLGI
EGSVQALMKLDTQSLLREAEEQGVNTACLTSTTMAASPTSGLFNTPPPTPPELFPTQDFS
DLRLLVDAALQRAAEQENLKRLQEAQNKPSDAVETQCSAYSSDPPSGSTPPPEDSQQVMD
ASRVQSLMEKAMAVPVSAVTSLKAPVAQSSPAPVLVPAPVLVSATRLSPLPMNKVIWNPL
DKDTTRASSPNHPQLIPAHLPTFVPVSASVFGQLDSQKSIAVPAITTALSPASPSSSVPV
PALLPASTSATVPASRPVSVPSAVLLPNTSSASVAASSQISSPSVPLVPAATSPTIASIA
SSRGVPIYLPFHKTPLMPVTVPCPSFISTSASSPAQVSVSGPASAPTPSSTPTITPLVGL
ASQLSPPSPPLHPSSTSSRNSTVGPSVWNMVHADTRQPSSLQVVKNPITTGWGPLHTMSE
TVN
NT seq
1812 nt
NT seq
+upstream
nt +downstream
nt
atgaaggcattcaaacgagctcttgaagaagagcatcggccagagcaggatcactcctcg
gccatgtcggacagcgatgacggctccccgctcgacctgtcaggaagggggcttcttgga
aagcgccgtcgccgtggcaacctgcccaaggaggcggtgcagattctgcggagctggctg
tatgaacaccgcttcaacgcttacccatcagagcaggagaaactcagtctctctggtcag
accaacctgtcagtactacagatatgtaactggttcatcaatgcacgtcgccgcctcctc
cccgacctgcttcgcaaggacggaaaagacccagccaagttcaccatctcccgaaagatt
gggggtaaaagtgaaggcaactcatctaatggaggtggagccagctctccagaaagaaac
tcctcccccagttcctctcaactgcggccatcggtcatccgttctgcccccacactggac
ctcagtcttcttgggaacacagccacggctattctgacaggagcaggctacctgggtata
gaaggatcagtgcaggcactcatgaagctggatacacaaagtttgctgagggaagcagag
gaacaaggggttaatacagcttgtctcaccagcacaacaatggcagctagtcccactagt
ggcctcttcaacactcctcccccaactccacctgagctgttccccacccaggacttcagt
gatttgaggcttctagttgatgcagccctgcaaagggcagcagagcaagaaaacctgaaa
agacttcaagaggcccagaacaaaccatcagatgccgtggagacacagtgcagtgcttat
agcagtgacccacccagtggctccacaccgcctccagaggacagccaacaagtcatggat
gcctccagagtacagagtctgatggagaaggctatggcagttccagtgtcagctgtaact
tcactgaaggcccctgtggctcagtcctcaccagcccctgttctagttccagctcctgtc
ttggtctcagccacaaggctgtctcctctaccgatgaataaagtcatctggaaccctttg
gacaaggacacgactcgagcctccagcccaaaccaccctcagctcatcccggctcatttg
ccaacatttgtgcccgtgtctgcttctgtctttgggcagctagattctcagaaatcaatt
gcagtgccagccatcaccacagctttatcaccagcttcaccctcaagctcagttccagtt
ccagcacttttgcccgcttcaactagtgccacagtaccagcttcaaggcctgtctctgtt
ccatcagcagtccttctgcctaatacaagttctgcctctgtcgctgcttcaagccagatt
tcttccccaagtgtacctctcgttccagcagctacttccccaaccatcgcctctattgca
tcctccagaggagtcccgatttacctgccattccataaaacccctttaatgcctgtcacc
gttccatgtccgtcgtttatttcaacatcggcatcgtctccagcccaagtttcagtgtct
ggcccagcttcagctccaacaccatcttctactccaacgatcacacctcttgtgggcctt
gcctcccagctctctcctccttctcctcctcttcatccctcttccacaagcagcaggaat
tccacagtgggacccagtgtttggaatatggtccatgctgacaccaggcaacccagttca
cttcaagtggtaaaaaaccccatcaccacagggtggggccctctgcacactatgagtgaa
actgtaaactag
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integrated database retrieval system
