Solea senegalensis (Senegalese sole): 122768263
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Entry
122768263 CDS
T07721
Name
(RefSeq) ATP-dependent RNA helicase DDX19B
KO
K18655
ATP-dependent RNA helicase DDX19/DBP5 [EC:
5.6.2.7
]
Organism
ssen
Solea senegalensis (Senegalese sole)
Pathway
ssen03013
Nucleocytoplasmic transport
ssen03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ssen00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
122768263
03015 mRNA surveillance pathway
122768263
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ssen03019
]
122768263
Enzymes [BR:
ssen01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
122768263
Messenger RNA biogenesis [BR:
ssen03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
122768263
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
DUF1028
Motif
Other DBs
NCBI-GeneID:
122768263
NCBI-ProteinID:
XP_043880057
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Position
LG4:9356484..9365694
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AA seq
488 aa
AA seq
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MATDSWAQAVDEQEAAAESIGNLQIKEKPEENGTTANAPDSSSAVAKSQGAGEKKETDED
DKDDKAAQSLLNKLIRSNLVNNPNQVEVLQKDPNSPLYSVKSFEELRLKPQLLQGVYGMG
FNRPSKIQETALPMMLAEPPQNLIAQSQSGTGKTAAFVLAMLSHVDPNYNYPQCLCVSPT
YELALQTGKVIEQMGKHYPEVKLVYAIRGNKLQRGIKLQEQIVIGTPGTMLDWCTKLKFI
DPKKIKVFVLDEADVMIATQGHQDQSIRIQRMLPKSCQMLLFSATFEETVWNFAQRIVPD
PNIIKLKREEETLDNIKQYFVMCYSKEEKFQALCNIYGAITIAQAMIFCHTRKTAGWLAG
ELSREGHQVALLSGEMQVEQRAAVIERFRDGKEKVLVTTNVCARGIDVEQVSVVINFDLP
VDKDGNPDKETYLHRIGRTGRFGKRGLAINMVDGQMSMNILKRIQEHFNKNIEQLDTDDL
DEIEKIAS
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
atggccacggactcatgggctcaggcagtggacgaacaagaagctgcggcggaatcgatc
ggaaaccttcaaataaaagagaaaccagaagaaaacggcaccactgcaaatgcaccagac
tcgagttctgctgttgcaaagtcacaaggtgcaggtgaaaagaaggaaacagatgaggat
gacaaagatgacaaagcggcacagtcattactaaacaaactcatccggagtaatcttgtc
aataatcccaaccaagtggaagttcttcaaaaggaccccaactctccactttactcggtc
aagtcctttgaggagttgcgacttaaacctcagctacttcagggagtttatggcatgggt
ttcaaccggccatcaaaaatccaggagactgccttacctatgatgctggctgaacctcca
cagaatttaatagcccagtcacagtcaggaacaggaaaaacagctgcctttgtcctggcc
atgctcagtcacgtcgaccccaactacaactatcctcagtgcttgtgtgtgtcgcccacc
tatgaactggcccttcagactggtaaagtgatcgagcagatgggcaaacactatcccgag
gtcaaactcgtctacgccatcagaggaaataaattgcagcgtggaataaagctgcaggaa
cagatagttattggcacacctggtacaatgctggactggtgcacaaagctgaagtttata
gaccccaagaagatcaaggtgtttgtcctggacgaggctgacgtcatgatcgccacacag
ggtcaccaggaccagagtatccgtattcagaggatgctgccaaaatcctgtcagatgtta
cttttttcagccacgtttgaagaaacggtctggaactttgcccagcgcattgtgcccgac
cccaacatcatcaaactgaagagagaggaggagactctggacaatatcaaacagtacttt
gtgatgtgctacagcaaggaggaaaaattccaggctctctgcaacatctacggagctatc
accatcgcccaggctatgatcttctgccatacaaggaagactgcaggctggctggctggg
gagctgtccagagaaggtcaccaggtggcactgctcagtggagagatgcaggttgaacag
agggctgcggtcattgagcgcttcagagatggcaaggagaaggttctggtcacgacaaac
gtttgtgctcgaggcatcgatgtagagcaggtttccgtggtgatcaactttgacttgcca
gtagacaaggacggtaacccagacaaagagacctacttgcacaggattggccgcacgggt
cgatttggcaaacggggactggcgatcaatatggtggacggccagatgagcatgaacatc
ctcaaaaggattcaggagcatttcaataaaaacattgaacaactagacactgatgatctg
gacgaaatcgagaaaatcgccagctaa
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