Solea senegalensis (Senegalese sole): 122768295
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Entry
122768295 CDS
T07721
Symbol
shmt2
Name
(RefSeq) serine hydroxymethyltransferase, mitochondrial
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
ssen
Solea senegalensis (Senegalese sole)
Pathway
ssen00260
Glycine, serine and threonine metabolism
ssen00630
Glyoxylate and dicarboxylate metabolism
ssen00670
One carbon pool by folate
ssen01100
Metabolic pathways
ssen01200
Carbon metabolism
ssen01230
Biosynthesis of amino acids
ssen01240
Biosynthesis of cofactors
ssen04981
Folate transport and metabolism
Module
ssen_M00141
C1-unit interconversion, eukaryotes
Brite
KEGG Orthology (KO) [BR:
ssen00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
122768295 (shmt2)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
122768295 (shmt2)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
122768295 (shmt2)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
122768295 (shmt2)
Enzymes [BR:
ssen01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
122768295 (shmt2)
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Motif
Pfam:
SHMT
Motif
Other DBs
NCBI-GeneID:
122768295
NCBI-ProteinID:
XP_043880118
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Position
LG4:20522775..20541755
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AA seq
500 aa
AA seq
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MLSLARQLTRPLCQRAPLRLSLRGQQSHAATHSVNEDRPWTGQDSLAQDDPEMWDLLRKE
KDRQCRGLELIASENFCSRAALEAQGSCLNNKYSEGYPGRRYYGGAEVVDQIELLCQKRA
LEAFNLDPDLWGVNVQPYSGSPANFAAYTAVLNPHDRIMGLDLPDGGHLTHGYMSDVKRI
SATSIYFESMPYKLNTATGLIDYEQMELTAKLFRPKIIIAGTSAYARLIDYARVKKLCTD
INAYMLADMAHISGLVAASAVPSPFDHADLVTSTTHKSLRGARAGLIFYRKGVRSVDKKG
KEIKYDLEDKINFSVFPSLQGGPHNHAIAGVAVALKQANSPMFKEYIAQVLKNAKAMAEA
LLSKGYTLVSGGTDNHLVLVDLRPKGIDGARAERVLELASITANKNTCPGDKSALTPGGL
RLGAPALTSRQFKEADFVQVVEFMDEGFKIALDVKKKTGKLQDFKTFLLQDPETVARIAD
LRHRVETFARPFPMPGFHDH
NT seq
1503 nt
NT seq
+upstream
nt +downstream
nt
atgctgtcccttgcgagacaactcacacggcccctgtgccagagagccccacttcgtctc
agtctacgtgggcagcagtcccatgctgccactcattcagtaaatgaagaccgaccatgg
acgggccaggatagtctggctcaggatgaccccgagatgtgggatcttctgcgtaaagag
aaagacaggcagtgccgtggcttggagctcattgcctctgagaatttctgcagtcgagct
gctctggaagcacagggctcctgtctgaacaacaaatactctgaaggctacccaggaaga
cgatactatggtggagcagaagtggtcgaccaaattgagctactgtgccagaagcgagct
ttggaggctttcaacctggacccagatctgtggggtgtgaatgtccagccatactcgggc
tcgcctgctaactttgccgcatacaccgctgtgctgaacccccatgaccgcatcatgggc
ctggacctgcctgacggaggacatctgacacatggctacatgtcggatgtaaagaggatc
tccgctacctccatctatttcgagtctatgccctacaaactaaataccgcaacaggactc
atagactatgagcagatggagttgacagccaagctgttccggcccaaaatcatcattgct
ggcacaagcgcctatgcccgcctcattgactatgcccgcgtcaagaagctgtgcactgac
atcaatgcctacatgcttgctgacatggcccatataagtggcctggtggcagccagtgcc
gtcccctctccctttgaccatgctgaccttgtcacctcgaccacacacaaatccctccgt
ggagccagggccggcctcatcttctaccgcaagggcgttcgctcagtggataagaagggg
aaggagatcaagtatgaccttgaggacaagatcaacttctcagtcttcccctctctacag
ggtggaccacataaccatgccattgctggtgtggctgtggcactcaaacaggccaattct
cccatgttcaaggagtatatcgcccaagtcctgaagaacgccaaggctatggctgaagct
cttctcagtaaaggctacaccctggtatcaggtgggaccgacaatcacctggtcctagta
gacctgcggcctaagggcattgacggagctcgagccgaaagggttctggaacttgcgtca
atcacagccaataagaacacgtgtcctggggacaagagtgccctgactcctggtggcctc
aggctaggtgctccagccttgacctccaggcaattcaaagaggcggactttgtgcaggtt
gtcgagttcatggacgagggcttcaagattgctttagatgtcaagaaaaagactggcaag
ctccaagacttcaagacttttctccttcaggacccagagactgtggctcgcatcgctgat
ctgcgccaccgcgtcgaaacttttgccaggccctttcccatgccaggcttccacgatcat
tag
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