Solea senegalensis (Senegalese sole): 122768307
Help
Entry
122768307 CDS
T07721
Symbol
usp4
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 4
KO
K11835
ubiquitin carboxyl-terminal hydrolase 4/11 [EC:
3.4.19.12
]
Organism
ssen
Solea senegalensis (Senegalese sole)
Brite
KEGG Orthology (KO) [BR:
ssen00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ssen01002
]
122768307 (usp4)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ssen04121
]
122768307 (usp4)
Enzymes [BR:
ssen01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
122768307 (usp4)
Peptidases and inhibitors [BR:
ssen01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
122768307 (usp4)
Ubiquitin system [BR:
ssen04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
122768307 (usp4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
Ubiquitin_3
DUSP
UCH_1
USP7_C2
USP7_ICP0_bdg
SH3-C_UBE2O
Choline_bind_1
Motif
Other DBs
NCBI-GeneID:
122768307
NCBI-ProteinID:
XP_043880147
LinkDB
All DBs
Position
LG4:complement(25760027..25772549)
Genome browser
AA seq
1011 aa
AA seq
DB search
MMAEGGGPESGGAADSDAEPVAAQMPTPSTESQKQTVGSLLKTALRKGDEWYLIDSRWFK
QWKKYVGFDSWDMYNVGERSLYPGPIDNSGLFSDQETQTLKEHLIDELDYVLVPTEAWNK
LVSWYGCLEGQRPIARKVVEHGMFVKHCKVEVYLLELNLCENDNMDNVVTRHFSKADTID
IIEKEMRMLFNIPSEKETRLWNKYMSNTYEQLNKPDSTVQDAGLFQGQVLVIERKNEDGT
WPRQASHPKSSTTPSRNFTTSPKLSSYSSASISSTLANGDSSCSPGYTLNNSTSSGNRLG
GYNSYSSSYNYRESQSQPGLCGLSNLGNTCFMNSALQCLSNASPLTEYFLTDQYEAEINR
DNPLGMRGEIAEAYADLVKQMWMSRSSYVAPRTFKTQVGRFAPQFSGYQQQDSQELLAFL
LDGLHEDLNRVKKKPYLALRDAEGRPDEIVAKEAWTNHRLRNDSIIVDIFHGLFKSTLVC
PECSKVSVTFDPFCYLTLPLPMKKDRTMEVFLVRSDPQSRPTQHRVVVPKLGNVTDLCNA
MSKLCGIPSENMVVTDVYNHRFHKVYRRDENLNQIMEKDDIFMYEVQEENSERMNLPVYF
RERHSKHAANSTSTMLFGQPLLITVPRHNLVADVLYEKILERIGRYVKLPQSPGTESRAS
ASVASCSQAPECSTSTSVNAGLSGCGSPLSDGASCSASSSNGSNHSGTCNETNGIYDGDE
EAMDHQVSPEPQNGQSEEEEEETTSDLENGSNKGESKAKKSTVPAKLFTFSIVNSYGTAN
ISPLPCDGNVLKLNPHSTVAIDWDNESKKLCYDEQEAEAYEKHESMIQPQKKKATVALRE
CIELFTTMETLGEHDPWYCPTCKKHQQATKKFDLWSLPRILVVHLKRFSYNRCWRDKLDT
VVDFPIRDLNMSEFVCDPKAGPYVYDLIAVSNHYGGMGGGHYTAYGKNKMDGNWYYFDDS
SVSSATEDQIVTKAAYVLFYQRRDEESPSKPQPSASLGGAPEAAEDHMDTN
NT seq
3036 nt
NT seq
+upstream
nt +downstream
nt
atgatggccgagggaggcggacccgagtcgggtggcgcggcagactcagacgcggagccg
gtagccgcacagatgccaaccccttcaaccgagagtcaaaaacagactgttggatctctt
ttgaaaactgctctaaggaaaggcgacgaatggtatctaatagacagcaggtggttcaaa
caatggaagaagtatgtgggatttgacagctgggacatgtacaatgtaggagaaagaagc
ctctatccaggaccaattgacaactctgggctgttttcagaccaggaaactcagaccctg
aaagagcaccttatagatgagctcgattatgtccttgtacccaccgaggcatggaataag
cttgtcagctggtacggctgccttgagggtcagagaccaattgccaggaaggtggttgaa
catggtatgtttgtgaagcactgtaaagtggaggtctatctgctggagctgaatctgtgt
gagaatgacaacatggacaatgtggtcacacgccattttagtaaggctgatactatagac
ataatagagaaggagatgagaatgctgttcaatatcccatcagagaaggagacacggctc
tggaacaaatacatgagcaacacctatgagcagctgaacaagcctgacagcactgtgcag
gatgctggtctgttccaggggcaggtgcttgtgatagagcggaagaacgaggatggcacg
tggcccagacaagcgtctcatcccaaatcaagtacaaccccatccaggaatttcactacc
tcccccaaactctcctcttactcatcagccagtatctcctcaacattagccaatggagac
agcagctgtagccctggatatacactcaataacagcacgtcctccgggaacagattgggg
ggctacaactcgtatagctcctcctacaactacagggagtcccagtcgcagcctggcctt
tgtggtctcagtaatttgggcaacacgtgcttcatgaactctgccctccagtgcctgagc
aacgcatcaccactcacagagtacttcctcactgaccagtatgaggccgagattaaccgc
gataacccattgggaatgagaggcgagatagccgaagcctatgctgatctagtgaagcag
atgtggatgagccgtagcagctatgtggccccacgcacctttaaaacccaggtcggacgc
tttgccccccagttttcaggctaccagcagcaggactcgcaggagctgttggccttcctg
ctggacggactacatgaagatctaaaccgtgtcaagaagaagccttatctggccctgagg
gatgcagagggccgtccagatgagattgttgctaaggaagcctggacaaaccaccgtttg
cgcaatgactccattatagtagatattttccatggcctcttcaaatctacgttggtttgc
ccagagtgctccaaggtgtccgtcacctttgacccattctgctacctcacactacctctg
cccatgaagaaggaccgcaccatggaggttttcctggtgcgatcagaccctcagtcgaga
cccacgcagcatcgagtggtcgtccccaaactgggtaacgtgacagacctgtgcaatgcc
atgtccaagctctgtggtatcccttcagaaaatatggtggtgacggatgtttacaatcac
aggttccataaagtttatcgacgggacgagaacctcaaccaaatcatggagaaggatgac
atcttcatgtatgaggtacaggaggagaacagcgagaggatgaacctgcctgtgtacttc
agggagcgccattcgaaacacgccgcaaactccacgagcaccatgctgttcggccagcct
ttgctcatcactgtgcccaggcacaacctcgtagcagatgttctgtatgaaaagatcctg
gagagaattgggcgttatgttaaactaccccagagccccggcactgaaagcagggcctcg
gcctccgttgccagctgcagccaggctccagaatgttccacatctacaagtgtcaatgcc
ggcctgagtggctgtggcagccccctgtccgatggagcctcctgcagtgccagctccagt
aacggcagcaaccactcggggacctgcaatgaaactaacgggatatacgatggtgacgag
gaggccatggaccaccaggtgagcccagaaccgcagaacggccagtcagaagaagaggag
gaggagacgacgtctgacttggagaacgggtcgaataaaggagagagcaaagcaaagaaa
agcaccgtgccggccaagctcttcacgttcagcatcgtcaactcttacggaacagccaat
atcagcccgcttccttgcgatggaaatgtcctcaagctaaatccacattccacagtggcc
atcgactgggacaacgagtcaaagaagttgtgctacgatgaacaggaagccgaggcttat
gagaagcacgagagcatgatccagcctcaaaaaaagaaggccaccgtggctctgagggag
tgcattgagctcttcaccaccatggagactctcggagaacacgatccatggtattgtccc
acgtgtaagaaacaccagcaggccacaaaaaagtttgacctgtggtcgctgcctcgcatt
ctggtcgttcacttgaagcgtttctcatacaatcggtgttggagggacaagctggacaca
gtggtggactttcccatcagagatctgaacatgtcagagtttgtgtgtgaccctaaggcc
ggcccttacgtatatgacctcatcgccgtgtcaaaccactacggaggaatgggaggtggt
cactacacggcctatggcaagaataaaatggatgggaactggtattactttgacgacagt
agtgtctcgtctgccacagaggaccagattgtgacgaaagcagcctacgtgctgttctat
cagcgcagagacgaggagtctccctccaaacctcagccttcggcctcactgggtggagca
cccgaagcagctgaagaccacatggacacaaactga
DBGET
integrated database retrieval system
