Solea senegalensis (Senegalese sole): 122768308
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Entry
122768308 CDS
T07721
Symbol
stau1
Name
(RefSeq) double-stranded RNA-binding protein Staufen homolog 1 isoform X1
KO
K17597
double-stranded RNA-binding protein Staufen
Organism
ssen
Solea senegalensis (Senegalese sole)
Brite
KEGG Orthology (KO) [BR:
ssen00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ssen01009
]
122768308 (stau1)
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ssen03019
]
122768308 (stau1)
Protein phosphatases and associated proteins [BR:
ssen01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
122768308 (stau1)
Messenger RNA biogenesis [BR:
ssen03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
122768308 (stau1)
mRNA cycle factors
Stress granule specific factors
122768308 (stau1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
dsrm
Staufen_C
DND1_DSRM
Motif
Other DBs
NCBI-GeneID:
122768308
NCBI-ProteinID:
XP_043880148
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All DBs
Position
LG4:23616144..23624893
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AA seq
695 aa
AA seq
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MSQLQFQCPSIPMPAAPAPLQLGQPQPGYSIPCASGTLPSESASQPIRSSALPAGSATPY
NTTTVSNMANPKEKTPMCLVNELARFNKIQPEYKLLCEQGPAHSKIFSVRLTLGDQHWEA
EGTSIKKAQHSAASSALAETTLPKPTMRTPRNTGKNAVDGMTHTMELNALCMKLGKKPLY
KPIDPYPGMRPPNFNYNVRAPGPYQRSMQQYYYPFPPMGPMLYQMELTIGGQQFIGKGRT
RQLAKQEAAAKAVKVLQKEPILQQMPVMNGEPEEENLNKSEISQVFEIALKRNLPVNFEV
LKEEGPPHMKSFLVRVFVGEFTGEGEGKSKKIAKKLAAAAVLRELKRLPPIPSVEKMLPR
IKKKTKSIIKLQTSPEYGQGMNPISRLAQIQQAKKEKEPEYSMVTERGLPRRREFVMQVT
VCGQSAEGLGPSKKVAKRNAAEKMLDLLGYKVPQPQPPKPALKTDEKTPVKRPGDGRKVT
FFEPGSVEEVALGSKEEDYRLPYLSHQQLPAGILPMMPEVAQAVGACQVSQAKDFSRAIP
NPGKATITAMIANELLYAGTSPTAETILKNKNNINQLPHGPLTRPSEQLGYLASVQGLQV
EYKDFPKNNKNEFVSLINCSSQPPLISHGIGKDVESCHDMAALNILKMLSELDQQPNERA
GNGPVSGCGKQEMEGDMHLKQANSSTLAQTLDGTV
NT seq
2088 nt
NT seq
+upstream
nt +downstream
nt
atgtcccagctccagttccagtgtccatctatccccatgcctgctgctcctgccccactg
cagctggggcagccgcagcctggctacagcatcccatgtgcatcaggcaccttaccctcg
gagagtgccagccagcccatcaggagctctgctctccccgcgggctctgccactccctac
aataccacaacagtatctaacatggcaaaccctaaagagaagacccccatgtgtttggtg
aatgagttagcccgtttcaataagatccaacctgagtataagctgctttgtgagcaagga
cctgctcactcaaagattttctcagtgaggctcacactgggagatcaacactgggaggca
gaagggaccagcatcaagaaagcccagcattctgctgcttcctctgccctcgctgagaca
actcttcccaaacccaccatgagaacgccacgcaacacaggcaagaacgcagtagatggc
atgacacacaccatggagttgaatgcactatgtatgaagcttggtaagaagcctctgtat
aaacccattgacccgtacccgggaatgagaccgccaaacttcaactacaacgtccgggct
ccaggaccttatcagcgctctatgcaacagtactactatccatttcctccaatgggacca
atgctataccaaatggagcttaccatcggaggacagcagtttattggaaagggacgtacg
cggcagttggctaaacaggaggctgctgccaaggccgtaaaagtgctgcagaaggaaccc
atattgcaacagatgccagtgatgaacggagagcccgaggaggagaacctcaacaaatca
gaaattagtcaagtgtttgaaattgcactgaaacgcaacttacctgtcaactttgaggtt
ttaaaggaagaaggccctccacacatgaagagtttcctagtgcgtgtttttgttggggag
ttcactggcgagggtgagggaaaaagtaaaaagattgccaagaagctggcagcagcagca
gtactgagagagttgaagaggctgccccccatacccagtgtggaaaagatgctgccacgc
attaaaaagaaaaccaaatccattatcaagctacagaccagcccagagtacggtcagggc
atgaatcccatcagccgcctggctcagatccagcaggccaagaaggagaaggagccggag
tacagcatggtcacagagaggggtctaccacggcgcagggagtttgtcatgcaggtgacc
gtgtgtggccagtctgcagagggactgggacccagcaagaaggtggccaagaggaacgca
gcagagaagatgctggacctcttaggatataaagtgcctcagccccagccccctaaaccg
gcactcaaaactgatgaaaagaccccagtgaaaagacctggtgatgggcgcaaagtgacc
ttctttgagcctggctctgtagaggaggtggcattgggttctaaagaggaggactaccga
ctgccttacctaagccatcagcagctacctgcaggcatccttcccatgatgcccgaggtg
gctcaagcagtcggcgcctgccaagtatcccaggccaaggatttcagtcgagccatcccc
aacccaggcaaagccacaatcactgccatgattgccaacgagctgctttatgcagggacg
tccccgaccgctgagactatcttaaaaaacaaaaacaacatcaaccaactgccccatgga
cccctcaccaggccttcagaacagctcggttatcttgcatcggtgcaaggtctgcaggtg
gagtacaaagatttccccaaaaacaataagaatgagtttgtgtcgctgattaattgctcc
tcccagccaccgctcatcagtcatggaattgggaaagatgtagaatcctgtcacgatatg
gctgcactaaatatactgaagatgctctcagagttggaccagcagccaaatgaaagagca
ggaaatggaccagtatctgggtgtggcaagcaggaaatggaaggtgacatgcacctcaaa
caggctaactcaagcacattggcacagaccctggacggcactgtttga
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