Solea senegalensis (Senegalese sole): 122768358
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Entry
122768358 CDS
T07721
Name
(RefSeq) LOW QUALITY PROTEIN: DDB1- and CUL4-associated factor 1-like
KO
K11789
DDB1- and CUL4-associated factor 1 [EC:
2.7.11.1
]
Organism
ssen
Solea senegalensis (Senegalese sole)
Brite
KEGG Orthology (KO) [BR:
ssen00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
ssen01001
]
122768358
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ssen04121
]
122768358
Enzymes [BR:
ssen01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
122768358
Protein kinases [BR:
ssen01001
]
Serine/threonine kinases: Other
Other
122768358
Ubiquitin system [BR:
ssen04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
122768358
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
Beta-prop_EML_2
WD40_CDC20-Fz
WDR55
WD40
LisH
EIF3I
WD40_WDHD1_1st
Beta-prop_WDR19_1st
Beta-prop_WDR90_POC16_2nd
Motif
Other DBs
NCBI-GeneID:
122768358
NCBI-ProteinID:
XP_043880227
LinkDB
All DBs
Position
LG4:2126948..2153431
Genome browser
AA seq
1523 aa
AA seq
DB search
MSSPTEEETSATTAVSSAVAVAVDTKADLAKLLDEWKEARRGGTETLVSVLTRISELIEK
ETAESHKADPDPFDDRHPGRSDPEGMLGKLLNTIFMNNDFTDALLDMYIMTSRDMSIKMA
ACRLLLDIMPGLETIVVFKEKEGAGEIRTAARGSRNHHSAHAYRTSARAMXNQEVAASYK
QENAPVPIMIRRLHELQLEDAKNRRLSETPQNLPQDSQVENTQTSSISTDLQDQTEEDVI
QDRERNGAKPLPDSVHQANQDLDFKKTEEKRGGGGSRRTVKENGRKAKQKLNFTSSSHEA
EEETENSNGTDQPISSTSWSEMSSMVIGSDYCLSPLSPAMEQRLILQYLTPLGEYQELLA
IFMQLDTRSLLMNYIDLAQTKNVQLIFDALQYLASLILHKKFAAEFIAHGGVQKLLEIPR
PSMASTGVSLCLYYLAYNQDAMERVCMLPDEVLSQMVSYALWLLESSHTSGVCHATMFFS
ISFSFRAVLQLFDKQDGLRRLVNLISTLEILNMEEEAIMSDDQVFSDRQTAKHTCMALRR
YFEAHLGVKVEQVKQSLHTAADKGSALPQQPFYKAYSYTREQAIEMMEFLIECGPPHLQW
EPVEVFFKLSCVPLMLQLISSACDWRNYYGRSDTVRYALDVLAILTVVPKIQMVLAETVD
VADEAGSPVSTVGMSIVLGVAEGEVFVNDAEIQKSALQVITNCVCAPDQSLTTAGAFADT
PLRPSVHLQQPHNRVLAHMWQLVQNNNGIKVLLSLLSVKAPITDADLIRALACKALVGLS
RCSAIRQIISKLPLFTSGQIQQLMKEPVLQDKRSEHVRFCRYAVEMTERVSGKPLLMGTD
VSLARLQRANVVAQSRISFSERELLVLIRNHLVAKGLTETASTLVKEAHLSAGPLCPNPS
CITPPPSSSVIHRTCRLAGGIAARAASHVGSSPVSTTSPPPPPPPPSRGLVTPHPSCSAS
STSALPTPPHPHGQGSHPVGRILFSRERPVSNWNSGKKLRALRQKSDHGAFIQTPAMKKQ
LERHLPSPPTLDSIITEYLREQHARCPNPVTTCPPFSLFTPHRCPEPKQRRQASPNFTAR
LGSRVLYPKYGGVDRGCLDRHLIFSRFRPMSVFHEGSGDESGFTCCAFSAHKRFLMLGTC
TGRLKFYNISSGEEEASYTCHTSPITHLEPSRDGKLLLTSGSWSVPLSTLWSFDSVFGMK
NSFVDDHYVEFSKLSQDRVIGTKDQVAHIYDIHTGQKTLTLNDPALANNYKRNCATFSPT
DDLVLNDGVLWDVRASRAVHKFDKFNMNISGVFHPNGLEVIINTEIWDLKTFHLLHTVPA
LDQCRVVFNSNATIMYGAMLQADDEDDAMDQQMKSPFGSSFRTFDATDYKPIATVDVKRN
IFDLCTDNKDRYLAVIENQDTVSFDMVCRLYEVGRQKLAEEGGDDDDDEDDDQDDDSSDS
DDDDDDDDDDMDTDPLIEELTNDNRENRRRTDSPTDEDIAELLLQGNSDDDDDDDNDDVS
ASDDDSADSFRDEGERSDDDLWF
NT seq
4572 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcaccgacagaagaagaaacatcggccaccaccgcggtgtcgtcagctgtggcg
gttgccgtggataccaaagccgatctggccaagctgttggacgagtggaaagaggcccgg
cgtggcggcacagagacactggtgtccgtcctcacgagaatctctgagctgattgaaaag
gaaacggctgagagtcacaaagcggatcccgatccgttcgatgaccgtcacccaggtcgg
tcagacccagaggggatgctgggaaaactcctgaacacaatcttcatgaataacgacttc
accgatgctcttttggacatgtacatcatgaccagcagagatatgagcatcaaaatggcc
gcctgtcgtcttcttctggacatcatgccgggcctggagacgatagtcgtcttcaaagag
aaggagggcgcaggagaaatccgtacagccgctcgcggaagtcgtaaccaccacagcgcc
cacgcttacaggacttctgccagagccatgnnaaaccaggaggtggcagcaagctacaaa
caggagaacgccccagttccgatcatgatccggcgcctgcacgagctgcagttagaagac
gcgaagaatcgccgtctctctgagacgccccagaatctacctcaggactctcaggtggaa
aacacacagacctcaagtatctcaacggacctgcaagaccagactgaggaggacgtgatc
caggacagagagagaaacggagccaaacctttgcctgactctgtgcaccaagcaaaccag
gacctggactttaaaaaaacagaggagaagcgaggaggaggagggagtagacggacggtg
aaggagaacggcaggaaggccaagcaaaagctcaacttcacctcctcctctcacgaggca
gaggaggagacggaaaacagcaacggcactgatcagccaatcagcagcacgtcctggtca
gagatgagctcgatggtgattggctctgattactgcctgtcaccgctcagcccggccatg
gagcagaggctcatcttgcagtatctgacgccgctgggagaataccaagagttgctggcc
atcttcatgcagctggacacgcggtcgctgctgatgaactacatcgacctcgcgcagacc
aagaacgtgcagctgatcttcgatgctcttcagtatctcgcctcactgatcctccacaaa
aagtttgcggccgagttcatcgctcatggtggcgtgcagaaacttctggagatcccgagg
ccttcgatggcatcgaccggagtctccctctgtctgtactatctcgcctacaaccaagac
gccatggagagagtgtgtatgctccctgatgaagtgctgtcacagatggtgtcctacgct
ctgtggctgctggagtcgtcgcacacctccggtgtgtgccacgccaccatgttcttctcc
atctccttctccttcagagcggtgctgcagctcttcgacaaacaggacggcctgcgcaga
ctcgtcaacctgatcagcacgctggagatcctgaacatggaggaagaggccatcatgagc
gatgaccaggtgttttctgaccgacagacggccaaacacacctgcatggccctgcgcagg
tatttcgaggctcacctgggagtgaaggttgagcaggtgaagcagtctctgcacacggcg
gcagacaaaggctctgcacttcctcagcagccattttataaggcttactcgtacaccagg
gagcaggcgatcgagatgatggagttcctcatcgagtgtggaccaccgcatcttcagtgg
gaacctgtggaggttttcttcaagttgtcctgtgtccctttaatgctgcagctcatttct
tcagcctgtgactggaggaattactacggcaggagcgacactgtgcgttacgccttggac
gtcctggcgatcctgacggtggttcctaaaatccagatggtgctggcggaaactgtggac
gttgcggacgaagcggggtcgcccgtttccaccgtgggtatgagcatcgtcctgggcgtt
gcagagggggaggtgtttgtcaacgacgccgagatccaaaagtctgcacttcaagttatc
acaaactgcgtgtgcgctccagaccagagcctgaccactgcgggtgcgttcgctgacacg
cccctcaggccgtccgtgcacctgcagcagcctcacaaccgggtgctggcccacatgtgg
cagctggtgcagaacaacaacggcatcaaggtgcttctgtctctgctgtcggtgaaggcg
cccatcacagacgcagacctgatccgtgctctggcctgcaaggccctggtcggactctcc
cgctgctctgcaatccgacagatcatcagcaaactgccgcttttcaccagtggccaaatc
caacagctgatgaaggagccagtgctgcaggacaagcgcagtgagcacgtccgcttctgc
cgctacgccgtggagatgacggagcgtgtgtccgggaagccgctgctcatgggcaccgac
gtgtcgctggctcgtctgcagagggccaacgtggtcgcccagtcccgcatcagcttctct
gagcgggagctcctggtgctgatcaggaaccacctcgtggccaaaggtctcactgaaacg
gcgagcacgctcgtcaaggaggcacatttatccgccggccccctctgtcctaacccctcc
tgcatcacccctcctccctcctcctcggtgattcacaggacttgtcggctcgccggcggg
atcgcagcccgtgctgccagccatgtcggatcctctcctgtgtccaccacatcaccgcct
cctcctcctcctcccccctctcgtggccttgtcacccctcacccctcatgctctgcctcg
tctacctctgccctcccgactcctcctcatcctcatgggcagggctcacatccggtcgga
cggattttattctcgcgggaacgtccagtgtccaattggaactcagggaagaaacttcgt
gcactgaggcagaagtcggaccacggtgctttcatacagactccggccatgaagaagcag
ctggagcgccacctgccgtcgccaccgaccctcgacagcatcatcaccgagtatctgagg
gagcagcacgcacgctgccccaaccccgtcaccacctgcccgcccttctcgctcttcacg
ccgcacagatgccccgagcccaaacagaggcggcaggcgtcgcccaacttcaccgcgcgc
ctgggcagcagagtcctgtaccccaaatacggaggagtggaccgaggatgtttggaccgc
cacctgatatttagcagatttcggcctatgtcggtgttccatgagggcagcggggacgag
agcggcttcacttgctgtgccttctcggcccacaagcgtttcctgatgctgggaacctgc
accggtcgcctcaaattctacaacatctcctctggagaagaggaggcgagctacacctgc
cacacatcaccgatcactcacctggaaccctcgagggatggaaaactactgctcacctct
ggttcttggagcgtccccttgtccaccctgtggagtttcgacagtgtctttggcatgaaa
aactcgttcgttgacgatcactatgttgagttcagtaaactctctcaggaccgagtcatc
ggcaccaaggaccaagtcgcacatatctacgacatccacacgggccagaagacgctgacc
ctgaacgaccccgccctggccaacaactacaagaggaactgtgccactttcagccccacc
gacgacctggtactaaatgacggggtgctgtgggacgtgcgggcgtcgcgggccgttcac
aagttcgataagttcaacatgaacatcagcggggttttccaccccaacggcctggaggtc
atcatcaacacagagatctgggacctgaagaccttccatctcctgcacactgtccccgcc
cttgaccagtgcagggtagtcttcaacagtaacgccaccatcatgtacggagctatgcta
caagctgatgatgaggacgatgcgatggaccagcagatgaagagccccttcggctcatcc
ttcagaacctttgatgctacagactacaagcccattgccaccgtggacgtaaagagaaac
atctttgacctgtgcaccgataacaaagaccgttatctggccgttattgagaaccaggac
acagtgagttttgacatggtgtgtcgtctgtatgaggtgggacgacagaaactggccgaa
gagggtggcgacgacgatgacgacgaggacgacgaccaggacgacgattcctcggactcg
gatgacgacgacgacgacgacgacgacgacatggacacagatccgctcatcgaggagttg
accaatgacaacagagagaaccggaggaggacggactctcccacagatgaagacattgct
gaacttcttcttcagggcaacagcgacgacgacgatgatgatgataacgatgacgtcagc
gcctcagacgatgattcggcggattctttcagagatgaaggagagcgatcggatgacgac
ctgtggttctga
DBGET
integrated database retrieval system
