Solea senegalensis (Senegalese sole): 122768363
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Entry
122768363 CDS
T07721
Symbol
sdc4
Name
(RefSeq) syndecan-4
KO
K16338
syndecan 4
Organism
ssen
Solea senegalensis (Senegalese sole)
Pathway
ssen04512
ECM-receptor interaction
ssen04514
Cell adhesion molecule (CAM) interaction
ssen04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ssen00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
122768363 (sdc4)
04514 Cell adhesion molecule (CAM) interaction
122768363 (sdc4)
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
122768363 (sdc4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
ssen00535
]
122768363 (sdc4)
Proteoglycans [BR:
ssen00535
]
Cell surface proteoglycans
Syndecan family (transmembrane HSPG)
122768363 (sdc4)
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Ortholog
Paralog
GFIT
Motif
Pfam:
Syndecan
WBS28
Glycophorin_A
Motif
Other DBs
NCBI-GeneID:
122768363
NCBI-ProteinID:
XP_043880230
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All DBs
Position
LG4:complement(1727743..1732018)
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AA seq
265 aa
AA seq
DB search
MIPLTPVPPPFCPGQVRETETWMPMKTTQTVAMATHQNRMESSGDFGFTDDNEDEDDDDS
YDDDDNDDYDNGYNDYYDEEDEDEFSGSGDGETTVSPKQAPEPSAKPDANDNKIPEVEHP
ERPAVNEVEIVQNSNEIPLLRNKEPAEGGEEFPSNVLMAHASDDSIFNKTEVLAAVIAGC
AVGLMFAVLLILLLIYRMKKKDEGSYDLGKKPIYKKAPTTEIYARPASPHTHTHTHTSHP
EPFKPNRASSWPLSASSSSSSSLFF
NT seq
798 nt
NT seq
+upstream
nt +downstream
nt
atgatccctctgactcctgttcctcctcctttttgtcccgggcaggttcgggagacggag
acatggatgcccatgaagaccacgcagacggtcgccatggcgacacaccaaaaccgcatg
gagtcatcgggtgacttcggcttcacggatgacaacgaagatgaagacgatgacgacagc
tacgacgacgacgacaacgacgactacgacaacggctacaacgactactacgacgaagag
gacgaggatgagttttccggctctggagacggagaaacaaccgtgtcaccgaagcaagcc
ccagaaccgtcagccaagcccgacgccaacgacaacaagatcccagaggtggagcatccc
gagagaccggccgtcaacgaggtggaaatcgtccagaacagcaacgaaatcccactgctg
cggaacaaggagccagcagagggcggcgaggagtttccctccaacgtcctgatggcccac
gccagcgacgacagcatcttcaacaagacggaggtcctcgcagctgtgatcgccggctgt
gccgtcggcctgatgttcgccgtcctcctcatcctcctcctcatctaccgcatgaagaag
aaggacgagggcagctacgacctggggaagaagcccatctacaagaaggcgcccaccaca
gagatctacgccagacccgcctccccccacacacacacacacacacacacctcacatcct
gaacctttcaaaccaaacagggccagttcttggcctctcagtgcctcttcctcctcttcc
tcctcgctcttcttctga
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integrated database retrieval system