Solea senegalensis (Senegalese sole): 122768393
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Entry
122768393 CDS
T07721
Symbol
tmf1
Name
(RefSeq) TATA element modulatory factor
KO
K20286
TATA element modulatory factor
Organism
ssen
Solea senegalensis (Senegalese sole)
Brite
KEGG Orthology (KO) [BR:
ssen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ssen04131
]
122768393 (tmf1)
Membrane trafficking [BR:
ssen04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
122768393 (tmf1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TMF_TATA_bd
TMF_DNA_bd
ATG16
Motif
Other DBs
NCBI-GeneID:
122768393
NCBI-ProteinID:
XP_043880306
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All DBs
Position
LG4:2728081..2741560
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AA seq
1157 aa
AA seq
DB search
MSWFNASHLSSFAKQALTSAQKSIDRVLDIKEEDQWGNTTVMPYDDVTLPGKLSLSGGWG
MTQWEAPPEERTPTPPLSSEAITTPVTRMVVDESEDFFSAFLPPVEIQGVTQPQVVSVPP
TKSQRRLQDEDSENEDAVIQEDVDTQMSTPANLIHESQTLAGIPPAESESSPAAPYTGTI
LLQPVSPVAPAGDLPCEPGSKPSSAKTVSELKTEQSLTPSEHQVEQDNTDSSDPSPVTPE
LKSSSSSDSPPSTSPKDMLPEQKDSKVEDRQNDTPSPPVSAFSSGTSTTSDIEVLDHESV
LSESSASSRQETSEVKAGLHLMQGSFQLLTASTCGDFPRMEDYPKLTESCGSSSDAFERI
DSFSVQSLDSRSVSEVNSDDENPGSRTLASVTAGSTPPTVSSAVCQKQEDGVVEAEGEEE
EEEGEEEEEEEGLAEALRQHSLDEMEESGRSATPVNTEEPEELIEQEAMAEASVTLSDPF
FSAEKQIAPPITEEMKSVSTVQILELQKVIDELSGRLEKRECQLLAVSKDKARLEEDCDN
LRDEVVSLKEETSTVQSLKDEFTQRIADAERKAQLACKERDIAKKEIKGLREDLSTRLNS
SDTLELIREKEEQIRGLLEEGEKLSKQQLQHSNIIKKLRAKEKESDTRIAKQQRKIKDQE
EELGHLQQILDGKEEVEKQHRENIKKLNAVVERQEKELSRLQSDSEELQEKNRSVQAALD
SSYKELAELHKANVSRASEAEEAAHSRETQAKEQLSLALEKAQEEARIQQEALGNQVADL
RLALQRAEQQQARKEDYLREEISELQQRLQEAEARNQELSHSVTSATRPLLRQIENLQAS
LGGQTASWEKLEKNISDRLADAQAQLAVAVEKERSAADELLSFKSQHTSLESQNSLLRQE
KARVLAQLDVERNKREKMEDESSREHVELENLRGEYGRMMEEAKKEKLLLANQLEMEKMK
VEQEKKKCYLAQEALKDKERRVLMTHSTGEPPATSTPSLSRSSSISGTDNGGLHTSLLFQ
DDSSEHSLSTMTMSGTNLYEAARLSGGSNIMENLQSQLKLREGEIAQLQLEISNLERSRS
VMAEELVRLTSQNDEMEEQVMEIPKLKVQLKELEQRHNTILQMYGEKAEEAEELRLDLED
VKNMYKTQIDELLKNQK
NT seq
3474 nt
NT seq
+upstream
nt +downstream
nt
atgagctggtttaacgcctctcacctgtccagcttcgccaaacaagctttaacctcagcg
cagaagtcaatcgaccgtgttctggacatcaaggaagaggaccagtggggtaataccact
gtgatgccctacgacgatgtgacgttgcctggaaagctgtcattaagtggaggatgggga
atgacgcagtgggaagctccccctgaagaaaggacccccactcccccgctgtcctctgag
gccatcactactcccgtcacccgcatggttgtggatgaatcggaagactttttcagtgcc
ttcctgccacctgtagagatacaaggtgtgacccaaccccaggtagtgtctgtccccccc
actaagtcccaaaggcggcttcaggacgaggacagcgaaaatgaagatgctgtgatccag
gaagacgtcgacactcaaatgtcgacacctgctaatctgatccacgagagtcaaacgttg
gccggaatcccaccggcggagtctgagtcctcaccagcggcaccttatacaggcactatt
ctcctgcagccagtttctccggttgctcctgccggtgatcttccatgcgaacctggcagc
aaacccagtagtgcaaaaacagtttcggagctaaaaacagaacagtcactgactccatca
gaacaccaggtcgagcaggacaacactgactcctcagatccttcacctgtcacccctgag
ctgaagagctcctcatcctctgattctccgccctccacatctccgaaggacatgctccct
gagcagaaagactcaaaggtagaggatcggcagaatgataccccctctcctccagtgagt
gccttctcctcaggaacctctaccaccagtgacattgaagtgctcgaccacgagagtgtg
ttgagcgagagctcagccagctccagacaagaaacgagtgaagttaaggccggccttcac
ttaatgcagggctcgttccagcttctcactgcctcaacctgtggagatttcccccgcatg
gaggactaccccaaactcacggagagctgcggctcctcctcggacgcattcgaacgcatc
gattcattcagcgtgcagtcgctggacagtcgcagtgtcagtgaggtgaactcggacgac
gagaaccccggtagtcggacgctggcgtccgtcactgcaggttctactcctcctacagtg
tcatcagctgtgtgtcagaagcaggaggatggagtggtggaggcggaaggagaggaggaa
gaggaggaaggagaggaggaggaggaggaggagggattggctgaagcgctgaggcagcac
tcgctggatgagatggaggagagtggccggagtgcaacgcccgtgaatacagaggagcct
gaagagttgatagagcaggaagctatggctgaggctagtgtcacgctttctgaccctttc
ttcagtgctgaaaaacagatcgctccaccaatcacagaagagatgaagagtgtctcaaca
gttcagatactggagcttcaaaaggtcattgatgagctgtcgggtcgcctggagaagaga
gagtgtcagctgctggcagtcagcaaagacaaggccaggctggaggaggattgtgacaat
ctcagagatgaagtggtgagcctcaaggaggaaacgtccactgtgcagtcgctgaaggac
gagttcacccagcgcatcgcagacgctgagagaaaagctcaactggcctgcaaagagagg
gacatcgccaagaaggagataaagggcttgcgggaagacctctcgacgaggctgaactcc
agtgacacgctggagctcatcagagagaaggaggagcagatcagaggtctgctggaagaa
ggcgagaagttgtcgaagcagcagctgcagcacagcaacatcatcaagaagctgcgcgcg
aaggagaaggagagcgacacaaggatcgccaagcagcagaggaaaatcaaggaccaggag
gaagaacttgggcacctccagcagatcctagatgggaaggaggaggtggagaagcagcac
agggaaaacatcaagaagctgaacgccgtggtggagcgtcaggagaaggagctgagcagg
ctgcagtccgactctgaggagctgcaggagaagaacagaagtgtgcaggctgccctggac
agctcttacaaggagctcgcagaactccacaaggcaaatgtcagccgagccagcgaagcc
gaggaggcggctcacagcagggaaacgcaagccaaggagcagctgagcctggctctggag
aaagctcaggaggaggccaggattcagcaggaggccctgggcaaccaggtggccgacctg
agactggctctgcagcgagcggagcagcagcaggcgaggaaagaagactatctgagggag
gagatcagtgagcttcagcagagacttcaggaggcagaggcgaggaaccaggagctcagt
cacagcgtgacctcggccacgcggccacttctgcggcagattgagaacttacaggcgtcg
ctgggcggacaaacggcatcctgggaaaaactggagaagaacatttctgaccggctcgcc
gatgctcaggcacagctggctgttgccgtggagaaggagcgctcagcagccgacgaactg
ctgtccttcaagtcccagcacacctctctggagtcccagaattccctgctccgccaggag
aaagcccgggtcctggcacagctggacgtcgagaggaacaagagggagaaaatggaggac
gaaagcagcagggaacacgttgaattggaaaacctacgaggagaatacggccgaatgatg
gaagaggccaagaaggaaaagctgctgttggctaatcaactagaaatggagaagatgaag
gtggagcaggagaagaagaaatgctacttggcacaagaggcactcaaagataaggagcgg
agggttcttatgactcactccacaggagaacccccagccacctccactccctcactgtcc
cgctccagctccataagtgggaccgataatggcggcctccacacctcgcttctattccag
gacgactcctcggagcactcgctcagcaccatgaccatgagcggaaccaacctgtacgag
gctgcccggctgtcgggaggatccaacatcatggaaaacctccagtcacagctcaaactc
cgagaaggagaaatcgctcagctgcagctggaaatctctaatctggagaggagtcgctcc
gtgatggcggaggagctggttcgactcaccagtcaaaacgacgagatggaggagcaggtg
atggagatccccaagctgaaagttcagctcaaggagctggagcagaggcacaacaccatc
ctgcagatgtacggggagaaggccgaggaggccgaggaactccgactggacctggaagac
gtgaagaacatgtacaagacccagatcgacgagctgctgaagaaccagaaataa
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integrated database retrieval system
