Solea senegalensis (Senegalese sole): 122768974
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Entry
122768974 CDS
T07721
Symbol
cspg4ba
Name
(RefSeq) chondroitin sulfate proteoglycan 4
KO
K08115
chondroitin sulfate proteoglycan 4
Organism
ssen
Solea senegalensis (Senegalese sole)
Brite
KEGG Orthology (KO) [BR:
ssen00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
ssen00535
]
122768974 (cspg4ba)
04091 Lectins [BR:
ssen04091
]
122768974 (cspg4ba)
Proteoglycans [BR:
ssen00535
]
Cell surface proteoglycans
Others
122768974 (cspg4ba)
Lectins [BR:
ssen04091
]
C-Type lectins
Others
122768974 (cspg4ba)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin_3
Laminin_G_2
Laminin_G_1
Cadherin_4
Laminin_G_3
TMEM154
SIT
Motif
Other DBs
NCBI-GeneID:
122768974
NCBI-ProteinID:
XP_043881146
LinkDB
All DBs
Position
LG5:14394994..14423400
Genome browser
AA seq
2407 aa
AA seq
DB search
MDSSVETNARRKLWIVGLLWWSLVVELASGASFYGDGFVQLKASESSNHNTLRVRFRTSS
TNGLLFLAASQTHHLLLELHAGCLQLKLDLGSGEQVLQSDQGTQLNDLAWHSVEVHQVQR
NITLTVDKNSHTRVKMPGSQHNLNILDGLYVGGSGGLDRPYLPRDLIGFRGCMEDVVFNE
HDLLSSLRPYAGFKNVHEVSLGCSPQFFATEEDPISFFSSRAYISLPSWNTQQEAVFECV
VHTSAKEGIMLYSSAREGDFVALEIQEGLPVAIVGKAGTKIELRSLTFINDKKWHSIKLH
FSSKSLDLTVDGEMVKSSINFRSKGIQLKGYLFIGGIDDSTRSEARKVGLVSVSGKRVRG
GSFKGCLKNIVVSGMKIGLSNALVTKDISVGCEPEKEPEPSTTVSPTGAPGPLLHLVTPT
PSFHMSTLARGLDSRYGSNFVQLRNLVVQEGGRASLDAKHIKILLDFKKLGIRQSQIMFR
IVEQPIRGQMRLDVDPDQEENTFSMLDLWHGRVMYIHGGSEEQDDFFMFSIYSSSRKQVP
DYLKDNKLHRYNITVTPTNDAPELSLPEGNLFVLLENSKKRLTTDVLKATDIDSSYDDLV
FSVLGNLNADAGYLEMENKPGKAVTSFSYSDLEDLRVCYVHTGVRNSRIVLRVSDGERVS
NTVVLRVMAVALEYKIANNTGLEVIQGDAVIISSKHLGVQTNAVKQMVDIRYDIIEPPQY
GELQRLHSSGEWRPTDSFSQRLLEKERLRYVSTFQDIQTSNATDYFKCKVNVAARAATEI
LFSISVKWVKYHLVKNIMIDLDKVRKVTLDSEHIFATAEGVVLSEDDLYFRVLTTPKKGK
LLLDTTALSKNSTFSQRDVTNLKLHYELVDRPFEDTSDRFKFQLVSKHAQSQNYDFQFSI
KADVNSVFMRNDGLSLLEGESKLITKEHLFAETLSTKDLYYTVINGPSHGKLARISQSNS
NASYDNILTFSNQDILEERIMYVHDDSETTQDDFTFIASITQGFKSSIAEDDIGSKEGMF
NISIKLVNDHKPVRVIDKVFHVVRDGQRLLTAEDLLYHDEDSDFDDRELIYTRRGIPLGD
LVLVNDTTHRLFQFRQQDLEEKRVLFIHKGVSTGRFVLFVSDGKHFVSSLLDISAHDPFL
KAENNTGLLVQKGQSVTLSTSNFSVISNLDIRDDQEVVFKLDEAPKYGGLYLSDTKMKLF
TQSDLKNGLISYRHNDSKHLADYFNLTAKAKGLQLRVMINVKVYLESHQRPPIVLHHNPL
LVEEGKPVRIDESKLEVTHEDNLPSEIVFTVKVAPSYGFLRRFVKAENHYVGTKHSPVKT
FNQEDINRGNIQYMQEEPNKVNDTFILDATNGVTDVGNIRMSVDIIPRLIPLQVSNFTLN
EGASKALTEDVLRVTNQHFSGINFLYTLSEPPQHGRIEHSRHSGVSITSFTRRQVEHEFI
YYVHDSSETLADNFTVVANDSGLRKQSAAQTVYIQVTAVNDEPPVITANRVLRVWVSSVT
EIRPEDLKVQDLDSPLEEVHFMVTPPSNGHLALKSAPMKAVLNFTQAHIDQGQLLFVHKG
AMSGGFNFQVNDGVNFTPRQIFSITARALVLNLERNRPLKVFPGFSALITNESLQAVTND
ISNTSSRTIVYSVIRHPKLGRLVMKRPDNSTVDISTFTQDMVDRKEVLYIQTPIESVGWE
AMDTITFSVASPPASLDNQIFKIDISYENTGPEHSTVLLANTGATVTEGDSVILDESNLD
ATNLMSKLPMPQRSSYEVWFQVTSLPRHGVIVVGERNLTKEKPNFSQFIINKYGITYKHD
NSETTHDSFVFSAWLNPKGKTAQRPQDDDDFVEEGFNITVTPVNDQPPLLKTKAPRLMVV
QGDTVALGPENLKVEDLDNPPDDIKFSVISKPNNGYLALEGRLNESIVAFTQGQINNGSV
NFIHDGSSASGVFYFSVTDGHHKPIYKLFNLEVIEITISLVNSTGLTLEQGKTSVLLTRD
NLAAATNGKNISIHYQITRPPNFGKILMENQEVTQFEQEDLQSGKLSYHMISLSSVEDSF
EFTAFTSEANLTDQVCNITVTPLVQVGKDLRIPNGIPVKLSTSFLNATELATISNSDPVF
EMIAHPKYGKVVQTKHKMSTKAGPAESFTFQDVIQGKVSLELNANMTGVQELNDSLVFLL
RADDIQPAKGELHFTVLPYDPVLFPTTTSPVPTTSLVPHTPIHTSRNGTAGPVLSTVFLS
TQQPSKNQQKFKGRNRWGNSNRTIYSTTVGKTTRGAEDFPLRNTPVRVESYPQKTSNPLL
VILPLLALLLLVIIFVVLVVYLRHHRQRKMSTAAPKEPPFPGPPDGDFYQGQTQRSTAVP
MVTITPLNPSCPSSPVLDRLLITNHGSGYNTVDSDMFLSSWSNGSPAASSQIIRTATPTL
QKNQYWV
NT seq
7224 nt
NT seq
+upstream
nt +downstream
nt
atggactcttctgtggagacaaacgcccggaggaagttgtggatagtcggtctcctctgg
tggtcgctcgtggtcgaactggcgtcgggagcttccttctatggggatggctttgttcag
ctcaaggcatctgagtcgtccaaccataacacactacgcgttcgcttccgaacgtccagc
accaatggtctgttgtttcttgctgccagccagacccaccacctcctactagagctccat
gccggttgcctccagctgaaactggaccttggatctggggagcaagtgttacagtctgac
caaggaacccagctcaacgatctggcctggcactctgtggaggtccaccaggtgcagcgc
aacatcaccctgactgtagacaagaactctcacacgagggtaaagatgccaggctcccaa
cataatctcaacatcttggatggtctctatgttggaggttcagggggcctcgacagacct
tatcttcccagagacctgattggcttccgaggctgcatggaggatgtggtcttcaatgag
catgacttgctgtcatcactgaggccatatgctggatttaagaatgtccacgaggtatct
ttaggttgcagtccccaattctttgccactgaagaggaccctatcagcttcttcagctct
agggcttacatttctcttccatcctggaatacccaacaagaagcagtatttgagtgtgtt
gtgcacacatcagccaaagaggggattatgttgtacagttcagccagagagggggacttt
gtggctttggagattcaggaaggtttgcctgtggccattgttggaaaagctggaaccaaa
attgaacttcgttctctcaccttcatcaatgacaagaaatggcattctatcaagttgcat
ttcagttccaaaagccttgacctaactgttgatggagagatggtaaaaagtagcatcaac
tttcgttcaaaagggattcagctcaaaggttatctttttattggaggtatagatgacagc
accagatcagaagccagaaaagttggacttgtgtctgtgtctggaaagcgtgttagagga
ggttccttcaaaggttgtttgaagaacattgtggttagtggaatgaagataggtctttct
aatgctttggtcaccaaggatatctcagtaggttgtgagccagagaaagaaccagaacca
tcaaccacagtgagtccaacaggggctccaggaccccttcttcacttggtgacaccgaca
ccgtcatttcacatgtctaccctcgcaaggggtttggacagcaggtatggctccaatttt
gttcagctcaggaaccttgtggtgcaggaaggtggtcgggcgtctcttgatgccaaacac
attaagatactcctggacttcaagaagcttggcattcggcagtctcagattatgtttcga
atcgtagagcaaccaattcgtggacagatgaggcttgatgtggatccagaccaggaggag
aacactttcagcatgttggacctttggcacggacgagtgatgtatatccatggaggctca
gaggaacaggatgatttttttatgttttctatttattctagcagtagaaagcaagttcct
gattatctgaaggacaacaaattgcaccgttataacattactgtgacaccaaccaatgat
gcacctgagttgagtctccctgaaggaaacctctttgtcctgttggagaactcaaagaaa
cgcctcaccacagatgttctgaaggcaacagacattgatagcagctatgacgaccttgtc
ttctctgtacttgggaacctgaatgccgacgcaggatatttggaaatggaaaacaagcct
ggcaaagcagtgacctcattctcatattcagacctggaggatctcagggtgtgctatgtt
cacacaggagttagaaactcaaggatagttctcagagttagcgatggggaaagggtcagc
aacactgtggttctaagggtcatggctgtagcactggagtataagattgccaacaataca
ggtcttgaggttattcaaggagatgcagttataattagttcaaagcatctaggagtgcaa
accaatgctgtgaaacaaatggttgacatccgttatgatatcattgaaccccctcagtat
ggagaacttcaaaggcttcactcaagtggtgaatggagacctactgactcattttcccaa
aggctgttagaaaaagaacgcctgaggtatgttagcacttttcaagatatccagacatct
aatgccactgattacttcaagtgcaaagttaatgtggccgcaagggcagccactgaaata
ctcttttcaatttctgtgaaatgggtgaagtaccatctagtgaagaatattatgatagac
ttggataaagttagaaaagtaacgctggactctgagcatatttttgccacagcggagggt
gtggtcctctcagaggatgacctttattttcgggttctcaccaccccaaagaaagggaag
ctcctgcttgacaccacagccttgagtaagaactcaacttttagccaaagggatgttacc
aatctgaaacttcattacgagctagttgataggcctttcgaagatacaagtgacaggttc
aaatttcagctggtttccaaacacgctcagtctcaaaactatgatttccagttttccatt
aaagccgatgtcaacagcgtgtttatgagaaatgatggactctcacttctggagggagaa
agtaagcttatcacaaaagagcatttgtttgcagaaactcttagcacaaaagatttgtat
tacacagtcataaacggccccagtcatggaaagcttgcccgaatcagccagtcgaattcc
aatgctagctatgacaacatcttaacctttagtaatcaggacatattagaggaaaggata
atgtatgtacatgatgatagtgaaacaactcaagatgactttactttcattgcctccata
acccaaggcttcaaatcttccattgcagaggatgacattggttctaaagaagggatgttt
aacatatctattaagctagtcaacgatcataagcctgtgcgtgttattgataaagttttt
catgttgtgcgtgatggacaaaggttactcactgcagaggatttgctttatcatgatgaa
gactcggattttgatgatagagagttgatttacactcgccgtggaatcccactgggagac
ctagttctggttaatgatacaacccatcgcctgttccagtttcgacagcaggatctggaa
gaaaagcgggtgttgttcatccataaaggtgtgagcactggcagatttgttctctttgtt
tcggatggaaaacattttgtatcgagccttttggacatcagtgcacatgaccctttctta
aaggctgaaaacaacactggtttactggttcagaagggccagtctgtcaccctgtccacc
agtaattttagtgtcatatcaaatctggacattagagatgaccaagaggtcgttttcaag
ttggatgaggctccaaagtatggaggtctttatctcagtgacacaaaaatgaagctgttc
acacagtctgacttaaagaacggactaatctcctatcgacacaacgacagcaagcatctg
gcagactatttcaacttaacagcgaaggctaaaggtttgcagcttagggtgatgatcaat
gtgaaggtttacctggaaagtcatcagaggccacccattgtgttgcatcacaacccctta
ctggtagaagagggaaaaccggtgaggattgatgaaagtaaacttgaggtcacccacgag
gacaacctgccatctgagattgtattcacagtcaaggtagccccctcttatggttttctg
cggcgatttgttaaagcggagaatcactacgtcggaaccaaacattctcccgtgaagaca
tttaaccaagaggacattaacagagggaacattcagtacatgcaggaggagcccaacaaa
gtcaacgacacctttatccttgatgctaccaacggggtcactgatgtcggcaacattagg
atgtctgttgacatcattccacgtctcataccacttcaggtctcaaatttcacactgaat
gagggcgcctccaaggcactgacggaggatgtgctacgagtcaccaaccagcacttttca
ggaatcaacttcctgtatacgttgtccgagcccccacagcacggtcgcattgaacactcg
agacattctggtgtgtctataacctctttcaccaggaggcaggtggaacatgaatttatt
tactacgtccacgacagcagtgaaaccttggctgacaacttcactgtggtggccaatgac
tcaggtctgaggaagcagagtgcagcacagaccgtgtacatccaggttacagctgtcaat
gacgagcctcctgttattacagccaacagggtcctcagggtttgggtgtcctccgtaaca
gagatcagaccagaggatctgaaagtgcaggacctggacagtccactagaggaggtccac
ttcatggtgaccccaccgagcaatggacacctggcactgaagagtgcccccatgaaggcc
gtgctcaacttcacccaggcacacatagaccaaggacaactgctgtttgtgcacaaaggt
gccatgtctggaggattcaactttcaagtcaatgatggtgtgaatttcacccccaggcag
atcttcagcatcacggccagagccttagtactcaatctagagagaaaccgtccactcaag
gtgtttccaggcttttctgcactcatcacaaatgaaagtttacaagcggtgaccaacgac
atcagcaacacctccagtcgcaccatcgtgtacagtgtgatccggcatccgaaactgggg
cggctggtgatgaagcggcctgataattcaacggtagacatctccactttcacacaagat
atggtggatcggaaagaggtcttatacattcaaacccccattgagtccgtgggctgggaa
gccatggacaccataacattctctgtagcatcaccacctgcttctctcgacaatcagatc
ttcaaaatagacatttcctacgagaatactggacctgagcacagcacagtcctgcttgca
aacacaggtgcgacggtaacagaaggagacagcgtcatccttgatgagtctaatcttgac
gctactaacctgatgtccaagctgccgatgcctcagaggagctcctatgaggtctggttt
caggtaacgtctctgcctcggcacggtgtcatcgtggtgggtgaaaggaacctcaccaag
gagaagccaaacttttcccagttcattataaacaaatatggaatcacctacaagcatgac
aactcggagacgacacatgattcgtttgtcttcagtgcgtggctaaatcccaagggcaaa
acagcgcagcgccctcaagatgacgatgattttgttgaggagggttttaatatcacagtc
acacctgtgaatgatcagccacctttgctaaaaaccaaagctccaaggctgatggtggtg
cagggagacacagtagccctcgggcctgagaatctcaaagttgaagacttggacaatcct
cctgatgatattaagttttctgtgatcagcaaaccaaacaatggttacctcgctctggaa
ggacgtttgaacgagtcaatcgtggccttcactcaaggccaaatcaataacggaagcgtc
aatttcatccatgatggaagttctgcctcgggggttttctattttagtgtcacagatggt
catcataaaccaatatataaactcttcaacctagaagtgatagaaatcaccatttctctg
gtcaactccactggattgaccctagagcaagggaagacgtcagtgttactgacccgggac
aatctcgctgctgctaccaatgggaagaacatctcgattcactaccagattacgaggcct
ccaaactttggcaaaattctaatggaaaaccaagaggttactcagttcgaacaggaagat
ctacagagcggaaagttgtcctaccatatgatctccctgtcctctgtggaagacagcttt
gagttcactgcctttacttcggaagcaaatctgactgaccaagtgtgcaacataaccgtc
acacctttagtccaggtgggcaaagacttgaggatccccaatggaattcctgtcaaactc
agcactagttttcttaatgctactgaactagctactatcagcaatagtgaccctgtcttt
gaaatgattgcccatcctaagtacgggaaggtggttcagacgaagcataaaatgtccaca
aaagcaggaccagctgaatctttcacctttcaggacgtgatacaggggaaagtctccttg
gagctgaacgccaacatgaccggagttcaagagctgaatgactcgctggtgtttctactg
agagctgatgacattcaacctgctaaaggggagttacacttcacagttttgccatatgat
ccagtactttttcctaccacaacaagtcctgtcccgaccacatcattggtcccccatacg
ccaatccacacttccagaaatggtactgccggtccagtcctgtctacagttttcctgtcc
acccaacaaccaagcaaaaaccagcaaaagttcaagggacgcaaccgctggggaaactcc
aatagaacaatttacagtacaactgttggcaaaacgacacgtggagcagaggatttcccc
ttaaggaacaccccagtacgtgtagagtcctaccctcagaaaacctcaaatccactcttg
gtgatcctgccactgctggccctgctgctgcttgtaatcatctttgtagtcctggttgtg
tatctacggcatcacaggcaaaggaagatgagcactgctgcaccaaaggagccgcctttc
cccggtcctccagatggtgacttctatcaaggccaaacccagaggagcacagcagttccc
atggtgactattacgccattaaaccccagctgccccagcagtcctgttcttgatcgatta
ttgattacaaatcacggctcagggtataacaccgttgattcagacatgttcttaagttct
tggagcaatggctcccctgcagcgtcgtcccaaattattaggaccgccacgccaactctt
cagaagaatcagtattgggtgtga
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integrated database retrieval system
