Solea senegalensis (Senegalese sole): 122768994
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Entry
122768994 CDS
T07721
Name
(RefSeq) serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B alpha isoform
KO
K04354
serine/threonine-protein phosphatase 2A regulatory subunit B
Organism
ssen
Solea senegalensis (Senegalese sole)
Pathway
ssen03015
mRNA surveillance pathway
ssen04261
Adrenergic signaling in cardiomyocytes
ssen04382
Cornified envelope formation
ssen04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
ssen00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
122768994
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
122768994
09150 Organismal Systems
09153 Circulatory system
04261 Adrenergic signaling in cardiomyocytes
122768994
09158 Development and regeneration
04382 Cornified envelope formation
122768994
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ssen01009
]
122768994
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ssen03019
]
122768994
03036 Chromosome and associated proteins [BR:
ssen03036
]
122768994
Protein phosphatases and associated proteins [BR:
ssen01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
122768994
Messenger RNA biogenesis [BR:
ssen03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
122768994
Chromosome and associated proteins [BR:
ssen03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
122768994
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
Beta-prop_THOC3
Beta-prop_WDR5
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_EML
WDR55
Beta-prop_CAF1B_HIR1
WD40_Gbeta
Beta-prop_IFT140_1st
WD40_MABP1-WDR62_1st
Motif
Other DBs
NCBI-GeneID:
122768994
NCBI-ProteinID:
XP_043881174
LinkDB
All DBs
Position
LG5:2669550..2676539
Genome browser
AA seq
448 aa
AA seq
DB search
MAGAVGGNSDVQWCFSQVKGAIDDDVAEPDIISTVEFNHSGELLATGDKGGRVVIFQQEP
ESKNQPQCRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLPQKNAAHFLLSTNDKTI
KLWKISERDKRPEGYNLKEEDGRYRDPSNVTTLRVPVFRPMDLMVEASPRRVFANAHTYH
VNSISVNSDHETYLSADDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNQC
NTFVYSSSKGTIRLCDMRASALCDKYSKLFEEPEDPNSRSFFSEIISSISDVKFSHSGRY
VMTRDYLTVKIWDINMETRPVETYQVHEYLRNKLCSLYENDCIFDKFECCWNGNDSVVMT
GSYNNFFRMFDRGYQQDVTLEASRENCKPQSVLKPRKVSTGGKRKKDEISVDSLDFNKKI
LHTAWHPLDNIIAVATTNNLYIFQDKLD
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
atggcaggggccgtcggtgggaacagtgatgttcagtggtgcttctcccaagtcaaagga
gccatagacgacgacgtagcagaacccgacatcatatcaacggttgaatttaaccattct
ggggagttgctggctaccggggacaagggtggtcgtgttgtcatctttcaacaagagcca
gagagtaagaatcagccacagtgtcgaggcgagtacaatgtttacagcaccttccagagc
cacgagcccgagttcgactacctgaaaagccttgaaatcgaggagaagatcaacaagatc
cgatggctgcctcagaaaaatgcagcgcatttccttttatctacgaacgacaaaaccata
aagctgtggaaaattagcgagcgcgacaagagaccggagggctacaacctgaaggaagag
gacggacgatacagagatcccagcaatgtcacaacactacgggttccagtattcaggccc
atggacttgatggttgaggccagccccaggcgagtgtttgcgaacgcacacacttaccac
gtcaactcgatctcggtcaacagtgaccatgagacgtacctgtctgcagacgacctgcgg
atcaacctgtggcacctggagatcactgatcgcagctttaatattgtcgacattaaacca
gccaacatggaggagttgaccgaggtgatcacggcagcagagtttcacccgaaccagtgc
aacacctttgtctacagcagcagcaaaggcaccatccgcctgtgtgacatgagggcatcg
gcgctgtgcgacaaatacagcaaactcttcgaagagccagaggatccaaacagtcgctcg
ttcttctctgagatcatctcgtccatctccgatgtaaagttcagtcacagcggacgctac
gtgatgacccgtgactacctgaccgtcaaaatctgggatatcaacatggagacgcgacca
gtcgagacatatcaggtgcacgaatatctcaggaataaattgtgttcactgtacgagaac
gactgcatctttgacaagtttgagtgctgttggaacgggaatgacagcgtcgtgatgacg
ggctcctacaacaacttcttcaggatgttcgacaggggctaccagcaggacgtcaccctg
gaggcgtcgcgggagaactgcaagccgcagtccgtcctgaagcctcgcaaagtaagcacg
ggtgggaagcgtaagaaggatgagatcagtgtggacagtcttgactttaacaagaagatc
ctccacactgcctggcatcctctggacaacatcattgcggtggccaccaccaacaacctg
tacatattccaggacaaactcgactag
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