Solea senegalensis (Senegalese sole): 122769018
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Entry
122769018 CDS
T07721
Symbol
si:dkey-13n15.2
Name
(RefSeq) protein transport protein Sec24C
KO
K14007
protein transport protein SEC24
Organism
ssen
Solea senegalensis (Senegalese sole)
Pathway
ssen04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
ssen00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
122769018 (si:dkey-13n15.2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ssen04131
]
122769018 (si:dkey-13n15.2)
Membrane trafficking [BR:
ssen04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
122769018 (si:dkey-13n15.2)
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Gene cluster
GFIT
Motif
Pfam:
Sec23_trunk
Sec23_helical
Sec23_BS
zf-Sec23_Sec24
Motif
Other DBs
NCBI-GeneID:
122769018
NCBI-ProteinID:
XP_043881207
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Position
LG5:16624360..16636714
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AA seq
995 aa
AA seq
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MMMDVPIANQSHTFCQWAGQNGWSTVPPPELLCNPLLSVQDLSLGSPSDQSCPSHMNALS
SYHNMGLANNAEQSGLHFIPNAHVSTMAPHASQDRTLPPGSLPLLNTGTQPCKPQQMSPF
PPLTPHQATSPTSQPLYTDQGSRNGPLLPHQNHLHTNPQCTPYTANMETAHHARYIHSPA
SPVFPIQQHNQWTPSPHSRGTMNEIVPSVAPQDRSIIPQSPNSESRYGLDPEILPSAVEV
IAEDRAEWEGKVFVSEPFSHLPPLATTSCMVEDQGNASPSVIRATSYCVPCEGQTALLCR
LPLGALVTPLAKQITGQKPLPLCRESDCMLGCSSCGASMCPGMSWQDCGQRFYCPFCGKL
SEVPWQHYQPTKGVEGARVDKDKRPELSMGSYEILGSERGEAAALLLAIDVSASALRGGH
LEFVTQQLHMLLTSMNREDGIALSSVRVGLMTYDSRIHLYDLSPTLSRPHMLVITDTEDL
QLPVREGLLVSFKDCVHSVESVLQLIPQFSAECDDSSGVPMELPVKAGLAILQALGCPGK
LLIFHTASFIETELSNSSSGFFGSNKPKTIFQPSEPDVSLAKECVRQGCGVHLFVLSNQD
VGGAWPGHIPYLTGGALHTYSHLQGELDRERFSTDLNRTVEMDTAYKAELRIFVSKDLRV
SGCYGLFNPGPSPSQVTMATLDQWTTLGVELAHTRALDETRGVAIQTVLSYSSQTGDRRT
RVHTLTLRCSRHLQDSFRHCQAQTLLTLYCKKMYCAVLERPLQELREELQMEITEALSLY
RKHCSSTSVSTGQLVLPQHLRALPVYINSLRKSEVLLPGLRTSVHQRLQQRCQVLGLDTC
GTVTHFYPLVLSIPLANNNSNPPDAERTLRCSAVSLEPTALCLVHAPLALLLWVGNQVPA
NVLAEAFNTSCFLSLPSGETKLPVLENRLSVSIRSLINTLNSQVPWARELWVVKQGDACE
EALQRHLVEDKSPNGGASYADFLYHLHVNSVRLLQ
NT seq
2988 nt
NT seq
+upstream
nt +downstream
nt
atgatgatggacgtccccatagccaatcagagccacacattctgccagtgggcgggacag
aacggctggtccacagtgccacctccggaactcctctgcaaccctctactcagcgttcag
gatctcagcctggggtcgccctctgaccagagctgcccgagccacatgaacgccctttca
tcttatcacaatatgggcttagctaataatgctgaacagtctgggctgcattttattccc
aatgctcacgtttcaaccatggctccacatgcaagccaagatagaactctacctccaggt
tctttgcctcttttgaacacaggaacacagccctgcaagccacaacagatgtcaccgttc
cctcctctcacacctcaccaggcaacatctcccacttctcagcctctgtacacagaccag
ggttcacggaatggacctctgttaccacatcaaaatcatctgcacacgaatccacagtgt
acaccatacacggcaaatatggagactgcacatcatgcaagatatatccacagtcctgcc
tcacccgtgtttcccatccaacagcataatcagtggacaccttctccgcactccagagga
accatgaatgagattgttcccagtgtggctccacaggacagaagcatcattccacagtct
cctaactccgaatccagatatggcctggacccagagatcctgcccagtgcggtggaggtg
attgcagaggacagggcagagtgggagggcaaggtttttgtctcagagcctttttcacat
cttcctcctctggcaactacttcctgtatggtcgaagaccagggtaacgcaagcccttct
gtcatccgtgccacctcatactgtgtgccctgtgaaggtcagactgccctgctctgtcgt
ttgcctctgggagctctggtcactcctctcgcaaaacaaattactggacagaagcccctc
ccactctgcagagagtcagactgtatgttgggttgtagtagttgtggagcctccatgtgc
ccggggatgagctggcaggactgcggtcagagattttactgccccttctgtggtaaactc
agcgaagtgccgtggcaacactaccagcccaccaaaggggtggagggggcccgggtcgat
aaagacaagagacctgaactcagcatgggatcgtatgagatacttggttcggagaggggt
gaagctgctgcactgctgctggccatagatgtgtctgcctcagcactgagaggaggacat
ctggagtttgtaacacaacaattacacatgctgctcacttctatgaacagggaggatggc
attgccttgtcaagtgtccgcgttggcttgatgacgtatgacagcaggatccacttgtac
gacctcagccccactctgtcccgtccacacatgctggtcatcacagacactgaagacctg
cagcttcctgtgagggaggggcttctggtgtcctttaaagactgtgtacacagcgtcgag
agtgtgttgcagcttattcctcagttcagtgcagagtgtgatgactcgagtggagttccc
atggagctgcctgtcaaagctggacttgctatactacaggctctgggttgtcctggtaag
ctgctgatcttccacactgcctcctttattgagactgaactcagcaactcctcctcaggg
ttttttggctctaataaaccaaagaccattttccagccatcagagccagatgtctcactg
gccaaagagtgtgtccgccaaggttgcggcgttcacctgtttgtcctctccaatcaagat
gtgggcggggcctggccaggacacattccatatctaactggtggtgctctgcacacctac
agccatctccagggagaattggacagagagcgcttcagcactgatcttaacagaactgta
gagatggacaccgcctacaaagctgaactcaggatttttgtcagcaaagatttacgcgtg
tctggctgttatggacttttcaacccgggacctagccccagccaggtcaccatggcaacc
cttgatcagtggacaacactgggggtggagcttgcccacaccagagctctggatgagact
agaggtgtagccatacagactgtattgtcttacagcagccagacgggagacagaaggacc
agggttcacactcttaccctgagatgctctcgtcacctgcaggactctttccgccactgc
caggcccaaacgctgctcaccctctactgcaagaagatgtactgtgctgtgttggagcgc
cctctacaggagctgagggaggagctgcagatggagataacagaagcgctgtcattgtac
agaaaacactgctcctctacctcggtttctactggacagctggtccttcctcagcacctg
cgagctcttcctgtgtacatcaacagtctcaggaagagtgaggtgctactgccgggtctg
aggacctccgtccaccagcggctgcagcaacgctgccaggtgcttggcctggacacctgc
ggcaccgtcacacatttctaccctctggtgctgtctatccccctcgcaaacaacaactcc
aaccctccagacgcagagcggacgctgcgctgcagtgctgtcagcctggagcccacagct
ctgtgtttggtccacgctccgctcgcgctgctgctgtgggtgggaaaccaagtcccagca
aacgtcctggctgaggcctttaacacgagctgcttcctctccctgccttctggagagact
aagctgccggttctggaaaaccgtctgtcagtcagtatccgatccctcatcaacacgctg
aactctcaggtgccctgggcgcgtgagctgtgggtcgtgaagcagggcgacgcctgtgag
gaggctctgcagcgccacctggtggaggacaagagtccaaacggaggagcgtcctatgca
gactttctctaccatctccacgtcaactctgtccgcctgctgcagtga
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