Solea senegalensis (Senegalese sole): 122769205
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Entry
122769205 CDS
T07721
Symbol
cltcl1
Name
(RefSeq) clathrin heavy chain 1 isoform X1
KO
K04646
clathrin heavy chain
Organism
ssen
Solea senegalensis (Senegalese sole)
Pathway
ssen04142
Lysosome
ssen04144
Endocytosis
ssen05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
ssen00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
122769205 (cltcl1)
04142 Lysosome
122769205 (cltcl1)
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
122769205 (cltcl1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ssen04131
]
122769205 (cltcl1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ssen04147
]
122769205 (cltcl1)
Membrane trafficking [BR:
ssen04131
]
Endocytosis
Clathrin-mediated endocytosis
Clathrin
122769205 (cltcl1)
Exosome [BR:
ssen04147
]
Exosomal proteins
Proteins found in most exosomes
122769205 (cltcl1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Clathrin
Clathrin_propel
Clathrin_H_link
Clathrin-link
TPR_PEP5_VPS11
TPR_COPA_B
TPR_Vps41
Gp18_dom_I
Motif
Other DBs
NCBI-GeneID:
122769205
NCBI-ProteinID:
XP_043881482
LinkDB
All DBs
Position
LG5:complement(14894581..14922419)
Genome browser
AA seq
1695 aa
AA seq
DB search
MAQILPIRFQEHLQLQNLGINPANIGFSYLTMESDKFICIREKVGEQNQVVMIDMSDPTN
PIRRPISADSAIMNPASKVIALKDAAKTLQIFNIEMKSKVKAHTMTEDVMFWKWISVNTV
ALVTDAAVFHWSMEGDSQPTKVFDRHASLAGCQIINYRTDEQQKWLLLIGISAQQNRVVG
AMQLYSVDRKVSQPIEGHAAAFGEFKVEGNANPSTLFCFAVRSQAGGKLHIIEVGQPAAG
NQPFAKKAVDVFFPPEAQTDFPVAMQIGSKHGVIYLITKYGYIHLYDLESGVCIYMNRIS
AETIFVTAPYEATSGIIGVNKKGQVLSVCVEEENIVNYATNVLQNPDLALRMAVRSNLAG
AEELFARKFNTLFAQGTYSEAAKVAASAPKGILRTAETIHKFQSVPAQPGQASPLLQYFG
ILLDQGQLNKFESLELCRPVLQQGRKQLLEKWLKEDKLECSEELGDLVKASDPTLALSVY
LRANVPNKVIQCFAETGQFQKIVLYAKKVGYTPDWVFLLRNVMRVNPDQGLQFAQMLVQD
EEPLANINQIVDVFMEGSLIQQCTSFLLDALKNNRPAEGHLQTRLLEMNLIHAPQVADAI
LGNQMFTHYDRAHVAQLCEKAGLLQRALEHYTDLYDIKRAVVHTHLLNPEWLVNFFGSLS
VEDSLECLRAMLSANIRQNLQLCVQVASKYHEQLGTEALVELFESFKSYEGLFYFLGSIV
NFSQEPDVHFKYIQAACKTGQIKEVERICRESNCYDPERVKNFLKEAKLTDQLPLIIVCD
RFDFVHDLVLYLYRNSLQKYIEIYVQKVNPSRLPVVIGGLLDVDCAEDVIKNLIMVVRGQ
FSTDELVEEVEKRNRLKLLLPWLESRIHEGCEEPATHNALAKIYIDSNNTPERFLKENPF
YDSAVVGRYCEKRDPHLACVAYERGQCDMDLIKVCNDNSLFKSEARYLVRRKDPELWVNV
LEEDNPYRRPLIDQVVQTALSETQDPEEVSVTVKAFMTADLPNELIELLEKIVLDNSVFS
EHRNLQNLLILTAIKADRTRVMEYINRLDNYDAPDIANIAISNELFEEAFAIFKKFDVNT
SAIQVLIEHIGNLDRAYEFAERCNEPAVWSQLARAQLQRDLVKEAIDSYIKAVDPSAYME
VVNAASKNNNWEDLVKFLQMARKKARESYVETELIFALAKTNRLAELEEFVSGPNNAHIQ
QVGDRCYEEEMYEAAKLLYNNVSNFARLASTLVHLGEYQAAVDSARKANSTRTWKEVCFA
CVDGEEFRLAQICGLHIVIHADELEDLISYYQDRGYFEELIALLEAALGLERAHMGMFTE
LAILYSKFKPQKMREHLELFWSRVNIPKVLRAAEQSHLWGELVFLYDKYEEFDNAVLTMM
SHPTDAWKEGLFKDIIAKVANVELYYKSLSFYLEYKPLLLNDLLAILSPRLDHSRAVAFF
SKVNELKLVKPYLRSVQNHNNKSVNEALNNLLTEEEDYQGLRASIDAYDNFDTIGLAQRL
EKHELIEFRRIAAYLYKGNNRWRQSVELCKKDKLYKDAMLYAAESKDAELAETLLQWFLE
EGRKECFAACLFASYDLLHPDVVLELAWRHNIMDFAMPYFIQVMREYLTKVDEFAAKVMV
DKLDEVESQRKKEDEVTEPQPMVFGQQLMLTASPAPVAPQPAYAGYGYPANAAGFPAQAP
NAAGYPAQPAYGFNM
NT seq
5088 nt
NT seq
+upstream
nt +downstream
nt
atggctcagatactgccgatacgatttcaggaacacctgcagttgcagaacctgggcata
aacccagccaacatagggttcagctatctgaccatggagtcggacaagttcatctgcatc
agagagaaagtgggtgagcagaaccaggtggtgatgatagacatgtcagaccccaccaac
ccaatcaggagaccaatctctgccgacagtgccatcatgaaccctgccagcaaggtcatc
gctctgaaagacgctgccaagactcttcagatcttcaacattgagatgaagagcaaggtg
aaggcccacaccatgaccgaggatgtcatgttctggaagtggatatcggtaaacactgtt
gccttggtgacggacgcggccgtctttcactggagcatggagggggattcccagccaacc
aaagtctttgatcggcatgccagtctggccggatgtcagatcataaactacagaactgac
gaacaacagaagtggctcttgctgatagggatctctgcacagcaaaaccgtgtagttgga
gcaatgcaactttactctgttgacaggaaagtgtcccaacccattgaaggccatgctgct
gccttcggggagtttaaagtggagggaaatgccaacccctccaccctcttttgctttgct
gtgcgttcacaggctgggggaaagctgcacatcattgaggttggtcagccagctgcagga
aaccagccatttgctaagaaagcagtggacgtgttcttccctcctgaggcccagacagac
tttcctgtagctatgcagattggtagtaagcatggcgtcatttatttaatcaccaagtat
gggtacatccacctgtacgacttggagtctggagtgtgcatctacatgaaccgaatcagt
gcagagaccatctttgtaaccgcgccatatgaagccacttcaggaattattggggtcaac
aagaagggacaggttttgtctgtgtgtgttgaagaggaaaatattgtcaactatgccacc
aacgtccttcaaaaccctgacctggccttgaggatggctgtgaggtcaaacctcgctggg
gctgaggaactttttgccagaaagttcaatacgctgtttgcccagggaacttattcagaa
gctgcaaaggttgctgcatcagcaccaaaggggatcctgcggacggcagagacaatccat
aagttccagagtgtcccggcccagcctggtcaggcctctccgctgttgcagtactttggt
attctactggaccagggacaacttaacaagtttgagtctcttgagctctgcaggcctgtt
ctgcagcagggccgcaaacaactactggagaaatggcttaaggaggataagctggagtgc
tcagaggagctgggagacctggtgaaggcctctgaccccacactggctcttagtgtgtac
ctcagagctaacgtccccaacaaggtcatccagtgctttgcagagactggccagttccag
aagattgtgctgtatgctaaaaaggtgggctacacgccagactgggtgttcttactgaga
aatgtgatgcgtgtcaacccggaccagggactgcagtttgcccagatgctggtgcaggat
gaggagccgctggccaacattaaccagattgtagatgtttttatggagggcagcttgatc
cagcagtgcacctccttcctattggatgctctaaagaacaaccgcccagctgaaggacac
ttacagacacgtctgcttgagatgaacctcatccatgccccccaggtagcagatgcaatc
ctggggaaccagatgttcacacactatgaccgtgcccacgttgctcagttatgtgaaaag
gcaggtctgctgcagagagctcttgaacactacactgacctgtatgatatcaaacgagcc
gtggtgcacacacatctgctcaaccctgagtggctggtaaacttcttcggctctttatca
gtagaagactcgttggagtgtttaagggccatgctatcagctaacatcagacagaacctg
cagctgtgtgtccaggtagcatctaagtatcatgagcagctgggaactgaagcgttagtg
gagctctttgagtccttcaagagttatgagggattgttttacttccttgggtcaattgtg
aatttcagccaggagcccgatgtccactttaaatacatccaggctgcgtgtaagacgggc
caaatcaaggaagtggagagaatatgcagagagagcaactgctatgatccagagagggtt
aaaaacttcctcaaggaggccaaactgacagaccagcttcctctcatcattgtgtgtgac
cgcttcgactttgtccatgatttggttctttacctctaccgtaacagtctacagaaatac
attgaaatctacgtgcagaaggtgaaccctagtcgtttacctgtggtgatcggtgggctg
ttggacgtagactgtgcggaggacgtcatcaagaacctgatcatggtggtcagaggccag
ttttccactgatgagctggtggaggaggtcgagaagaggaacaggttaaagttacttttg
ccatggctggagtcccgtatccacgaaggctgcgaggagccggccacacacaacgccctc
gccaagatctacatcgacagcaacaacacacccgagcgtttcctgaaggagaatccgttc
tatgacagcgccgtagtcggacgatactgcgagaagcgagaccctcacctggcctgtgtg
gcttatgagagagggcagtgcgacatggacctcattaaagtgtgcaatgacaactcattg
tttaagagtgaggctcggtacctggtccgacggaaagatccagagctttgggtgaacgtg
ttggaagaagacaatccctatagaagaccactcattgaccaggtggtgcagacggcactg
tcagagacccaggacccagaggaggtgtccgtcaccgtcaaggccttcatgaccgcagac
ctgcccaatgagctgatcgaactgctggagaagattgtacttgataactctgtcttcagt
gaacacagaaacctccagaacctgctgattttgacagccatcaaagcggaccgcactcgt
gtgatggagtacatcaacaggctcgacaactacgacgctccagacattgcaaatatcgcc
attagcaatgagctcttcgaagaggcgtttgcaattttcaagaagtttgatgtcaacacc
tcagccatacaggtattgatcgagcacatagggaacttggatcgtgcctacgagtttgcc
gagcgctgtaatgagcctgcagtttggagccagttagccagagctcagctacagagagac
ctggtcaaggaggctattgactcgtatattaaagctgtggacccgtcggcatacatggag
gtggtcaatgcagccagcaagaacaataactgggaagacttggttaaattccttcagatg
gctcggaagaaggcaagagagtcgtacgtggagacggagctgatctttgctttagcgaag
accaaccgtctggcggagctggaggaatttgtcagtgggcccaacaatgcccacatacag
caggtgggcgacagatgttatgaggaggagatgtacgaagcagcaaagctcttgtacaac
aacgtgtccaactttgctcgtcttgcttcgacacttgtccatctgggagagtaccaggca
gcggtggacagcgccaggaaagctaacagcacacggacatggaaggaggtgtgtttcgca
tgcgtggatggcgaagagttccgtttggcgcagatctgtggccttcacatcgtgatccat
gctgacgagctggaggacctcatcagctactatcaggaccgtgggtattttgaggagctc
attgctctgctggaggctgcgttgggtctggagcgggctcacatgggcatgttcaccgag
ctcgccatcctctactccaagttcaaacctcagaagatgagggagcatttagagcttttc
tggtccagagtcaacatcccaaaggttcttcgcgcagcagagcagtctcacttgtgggga
gagctggttttcctttacgacaaatacgaggagttcgacaacgctgtcctcacaatgatg
tctcatccgacagatgcctggaaagaagggctgttcaaggacatcattgctaaggttgca
aatgtggagttgtactacaaatctctttccttctacctggaatacaaacccctcctactg
aacgacctgctggctattctgtctccacggttggaccacagccgagctgtcgccttcttc
agcaaggtgaatgagctcaagctggtgaagccttacctgagatctgtgcagaaccacaac
aacaagtctgttaacgaagctctcaacaacctactgactgaggaggaagactatcagggc
ctgagagcatctatcgacgcttatgacaactttgataccattggcttggctcagaggtta
gagaaacatgaactgatcgagttccgacgtatcgctgcctacctgtacaaaggcaacaac
cgctggaggcagagcgtagagctctgcaaaaaggacaaactctataaggatgccatgttg
tacgctgcagagtctaaggatgctgagctggcagagacactgctgcagtggttcctggaa
gagggcaggaaggagtgcttcgctgcctgcctgttcgcctcctatgacctccttcacccc
gacgtggtgcttgagttggcctggaggcacaacatcatggactttgccatgccgtacttc
atccaggtcatgagagagtacctcactaaggttgatgagtttgcagcgaaggtgatggtg
gacaagctggatgaggtagaaagtcaaaggaaaaaagaggatgaggtgacagagccacag
ccgatggtgtttggccagcagctgatgttgactgcgtctcccgctcctgtggcgcctcag
ccggcatacgcaggctatggttaccctgccaacgcagcgggtttccctgctcaggctccc
aacgctgctggctaccctgcacagcctgcttatggcttcaacatgtag
DBGET
integrated database retrieval system
