Solea senegalensis (Senegalese sole): 122769276
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Entry
122769276 CDS
T07721
Symbol
trpc1
Name
(RefSeq) short transient receptor potential channel 1
KO
K04964
transient receptor potential cation channel subfamily C member 1
Organism
ssen
Solea senegalensis (Senegalese sole)
Brite
KEGG Orthology (KO) [BR:
ssen00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ssen04040
]
122769276 (trpc1)
Ion channels [BR:
ssen04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
122769276 (trpc1)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
TRP_2
Ion_trans
Ank_2
Ank_4
MTR4-like_stalk
LHD_TRPY1
TALPID3
Motif
Other DBs
NCBI-GeneID:
122769276
NCBI-ProteinID:
XP_043881633
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Position
LG1:complement(34876910..34892196)
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AA seq
796 aa
AA seq
DB search
MHISVCPYSLSVIMAALYQGTDASSPDKFLALKDVREVKEETTLDEKLFLLACEKGDYYM
VKKLLEENRHGELNLNCVDVLGRDAVTITIENENLDILQLLLDHGCQATDALLVAIDSEV
VGAVDILLNHRPRRSSKPSIAKLMQRIQNPEYSTTMDVAPVILAAHRNNYEILTMLLKQD
ISLPRPHAVGCECTLCNAKNKKDSLRHSRFRLDIYRCLASPSLIMLTEEDPILRAFELSA
DLRELSLVEVEFRNDYEELAKQCKMFAKDLLAQARNSRELEVILNHTSNEDHVDKRGLLE
ERMNLSRLKLAIKYNQKEFVAQSNCQQFLNTVWFGETASYRRKHTCLKIATVLSVAMLWP
LLSVCYLLVPRSRVGQIIHTPFVKFIIHSASYMTFLLLLNLYSLVYNEDMKNTMGPALEM
IDCMLILWIIGMVWSDVKRLWYEGLEDFLEESRNQLSFVMNSLYLATFALKIVAHSKFKD
KKETERKNWDAIHPLLVAEGLFAFANVLSYLRLFFMYTTSSILGPLQISMGQMLQEFGKF
LGLFLLVLFSFTIGLTQLYGKDQKNKDKNSPNDCEGIFCQQQSNDAFHTFMGTCYALFWY
IFSLAHVALFVTRISLTEELRSFVGAMIIGTYNIVVVIVLTKLLVAMLHKSFRQIANHED
KEWKFARAKLWLSYFDDKCTLPPPFNILPSPKTVCYLVTSMSKWICSHTSKGKVKRQNSL
KEWRNLKQKRDENYQKIMCCLVHRYLTSTRQKMQSTDQATVENLNDLRQDLSKFRNEMRD
LLGFRTSKYAMFYPRS
NT seq
2391 nt
NT seq
+upstream
nt +downstream
nt
atgcacatcagtgtttgtccgtactcgctctccgtcataatggcagctctataccagggc
acggacgcctcctctccggataaatttctggccttgaaagacgtgagggaggtgaaggag
gagaccacgctggatgagaagcttttcttattggcatgcgagaaaggtgactactacatg
gtgaagaaactgctcgaggagaacagacacggcgagctcaacctcaactgcgtggacgtg
ctgggccgagacgccgtgaccatcaccatcgagaacgagaatttagacatcctgcagctg
cttctggatcatggctgccaggcgacagatgccttgttggtggccatagactctgaagtg
gtgggagctgtggacatcctcctcaaccacaggcccaggcggtcgtccaaaccctccatc
gctaaactgatgcagcggattcagaacccagagtattccaccaccatggacgtggctcca
gtcatcctggctgcccacaggaacaattacgagatcctgaccatgctgctgaaacaagac
atctcgctcccgcggcctcatgctgtaggctgcgagtgcacactctgcaatgccaaaaac
aagaaggacagcttacggcactccaggttccgcttggacatctatcggtgccttgccagc
ccctcgctgatcatgttgaccgaggaagatcccatactcagagcctttgagctgagtgca
gacctcagggagctcagtctggttgaggtggagttcaggaatgattatgaggagctggca
aagcagtgcaagatgtttgccaaggacctgctggcacaggctcgaaactctcgagagctc
gaagttattctgaatcacacgtccaacgaagatcacgtcgacaagagaggcttgctggag
gagcgcatgaacctcagccgactcaagctggccatcaagtacaaccaaaaagagtttgtg
gctcagtccaactgtcagcagttcctcaacacggtctggttcggagagacggccagctac
cggcgcaagcacacctgtctgaagatcgccacagtgctgagcgtggcgatgctttggccg
ctgctttccgtctgctaccttctggtgccacgttcacgtgtgggccagatcatccacacg
ccctttgtcaagttcatcatccacagcgcctcctacatgacattcctgctgctgctcaac
ctctactctctggtgtataacgaagacatgaagaacaccatgggtcctgcgctggagatg
atcgattgcatgctcatcctttggatcatagggatggtgtggtcggacgtgaagcgtctg
tggtacgaagggttggaagactttctggaagagtcgaggaaccagttgagctttgtgatg
aattccctttatcttgccacctttgctctcaagatcgttgctcatagcaagttcaaggat
aagaaggaaacggagaggaagaactgggatgccatccatcccctgctggtggctgagggc
ctgtttgcttttgctaacgttctcagctacctgcgacttttcttcatgtacaccaccagc
tccatactggggccgctgcagatctccatgggtcagatgctgcaggagtttggaaagttt
ttgggcctcttcctgctggtgttattctccttcaccattggactcactcagctttacgga
aaggaccagaaaaacaaggacaagaattcacccaatgactgcgagggcatcttctgccag
caacagagcaacgacgcattccacacgtttatgggcacctgctatgctttgttctggtac
attttctccctggcgcacgtcgcgctcttcgtcacccgcatcagcttaacagaggagctg
cgctctttcgttggtgccatgatcatcggcacctacaacatcgtggtcgtgatcgtgctc
accaagctcctggtggcgatgctccacaaaagcttcagacaaattgctaatcacgaggac
aaggagtggaagtttgccagggccaaactgtggctcagctacttcgacgacaagtgcacc
ctgccaccaccgttcaatatcctcccctccccaaagacggtgtgctacttggtgaccagc
atgagcaagtggatctgttcgcatacctcaaaaggcaaggtgaagagacagaacagcctg
aaggaatggagaaacctgaagcagaagcgtgatgaaaactaccagaagatcatgtgctgt
ctggtccaccgctacttgacctccacgcggcagaagatgcagagcaccgaccaggccacg
gtggagaatttgaacgacctgcgccaggacctctcaaagttccgcaacgagatgcgagac
ctgctaggtttccggacgtccaaatacgccatgttctacccgaggagctaa
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