KEGG   Solea senegalensis (Senegalese sole): 122769320
Entry
122769320         CDS       T07721                                 
Symbol
sf3a1
Name
(RefSeq) splicing factor 3A subunit 1
  KO
K12825  splicing factor 3A subunit 1
Organism
ssen  Solea senegalensis (Senegalese sole)
Pathway
ssen03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ssen00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    122769320 (sf3a1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:ssen03041]
    122769320 (sf3a1)
Spliceosome [BR:ssen03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    122769320 (sf3a1)
 Complex B
    122769320 (sf3a1)
 Complex C
   U2 SnRNP specific factors
    122769320 (sf3a1)
SSDB
Motif
Pfam: PRP21_like_P Surp ubiquitin Rad60-SLD Ubiquitin_2
Other DBs
NCBI-GeneID: 122769320
NCBI-ProteinID: XP_043881705
LinkDB
Position
LG5:25442525..25447514
AA seq 783 aa
MPPGPVQIVQPEPNNKIDAPVEETPATKPIVGIIYPPPEVRNIVDKTASFVARNGPEFEA
RIRQNEINNPKFNFLNLNDPYHAYYRHKVNEFKEGKAQEPSAAVPKVMQQAMLQSQQLPQ
KVIQEAVIPKEPPPEFEFIADPPSISAFDLDVVKLTAQFVARNGRQFLTQLMQKEQRNYQ
FDFLRPQHSLFNYFTKLVEQYTKILIPPKGLLTKLKKEAENPKEVMDQVRYRVEWAKFQE
RERRKEEEEREKERVAYAQIDWHDFVVVETVDFQPNEQGHFPPPTTPEELGARILIQERY
EKYGESEEVEMEVESEDEDDVREDRGSGHPSQPDQDTQVQDMDEGSDDEDMGMKAPLPPD
NPMPPPLPPTPDQVIIRKDYDPKASKPQPSIAAPDEYLISPITGEKIPASKMQEHMRIGL
LDPRWLEQRDRVIKERQIEDEVYAPGLDIESSLKQLAERRTDIFGVEETAIGKKIGEEEI
QKPEEKVTWDGHSGSMARTQQAAQANITLQEQIEAIHKAKGLVGEDDTKEKIGPSKPSEI
HHQPPMPSSAPSMPKPSPPMTSLPRPPLSMAPPVRTTLLSAVPVLPRPPVSPVVRLAPGQ
VLSSVPHAPMIPAPRINVVPMPPSAPHIMAPRPPPMVVPTAFVPAPPVPQPPSSAPAPPS
HPPPPHDDEPVSKKMKTEDNLIPEEEFLRRNKGPVAVKVQVPNMQDKTEWKLNGQVLNFT
VPLTDQVSVIKVKIHEATGMPAGKQKLQYEGIFIKDSNSLAYYNMNNGSVIHLALKERGG
RKK
NT seq 2352 nt   +upstreamnt  +downstreamnt
atgccgcctgggcctgttcagatagttcagccggagcccaacaataagattgatgcacca
gtagaggaaaccccagctactaagccaattgttggcatcatatatccacctcctgaggtc
agaaacatagttgacaagacagccagctttgttgccagaaatggtcccgagtttgaagca
agaattcgtcaaaatgagatcaacaatccaaaattcaatttcctcaacctcaacgaccca
taccatgcctactaccgtcacaaggttaatgaatttaaagagggcaaagcacaagaaccc
tctgcagcagtgcccaaggttatgcagcaggccatgctgcaatcccagcagctgcctcaa
aaagtgattcaggaggcagtgattcccaaagaacctcctcctgagtttgagttcattgca
gaccctccgtcaatctcagcatttgacctggatgttgtcaaactcactgcccagtttgtt
gctcgcaatggccgccagttcctcactcagctcatgcagaaagaacagaggaactaccag
tttgactttctgcggccgcagcacagcctttttaattatttcaccaaactggttgagcag
tacactaagatactcatccctcccaaaggcctgttaaccaagctgaagaaggaggctgag
aatccaaaagaggttatggaccaggtacgataccgtgttgagtgggcaaagttccaggag
cgtgagagaaggaaggaagaggaggaaagagagaaagaaagggtggcatatgcccaaatt
gattggcatgactttgtagtggtcgaaacggtggatttccagcccaatgaacaaggccac
ttccctccaccaaccacaccagaggagcttggtgctcgtatcctcatccaagagcgctat
gagaagtatggagagagtgaggaggtggagatggaggttgagagtgaagatgaagatgat
gtgagagaggacagaggcagtgggcatccctcacagcctgatcaagacacacaagttcag
gacatggatgagggatctgatgacgaggatatgggcatgaaggctcctctgccaccagac
aatccaatgccacctccattgcctccaactccagaccaggttatcatccgcaaagactat
gaccccaaagcctccaagcctcagccttcaatcgcggctccggatgagtacctcatctca
cccattactggcgagaagatcccagccagtaagatgcaagagcacatgcgaattggtctg
ctggatccacgctggctggagcaaagagatcgtgttatcaaagagaggcagattgaagat
gaagtctatgctcctggtttggatattgagagcagcttgaaacagctggctgagaggcgt
actgatatctttggtgtggaagagactgctattggtaagaagattggtgaagaggaaatc
cagaagccagaggaaaaggtcacttgggatggccactctggaagtatggctcgtacacag
caggcagcacaggccaacattaccctgcaagagcaaattgaagccattcacaaagccaaa
gggctcgtcggagaggacgataccaaggagaaaattggcccaagcaaaccaagtgaaatt
catcaccagcctcccatgccctcctctgcaccgagtatgccgaaaccgagtcctcccatg
acttctctgccccgtccacccctatctatggcacctccagtgcgcaccactcttctgtct
gctgtacctgtacttccaaggccgcctgtgtcccctgtggtgcgccttgcaccaggacaa
gttctaagctcagtccctcatgctcccatgattcctgcgccccgtatcaatgtggttccc
atgccaccatcagcaccccacatcatggccccaagaccacctcccatggttgttccaact
gcatttgttccggctccaccagtgccacaaccaccaagctctgctcctgcaccgccttct
cacccacctccgcctcacgacgacgagccggtcagtaagaaaatgaagacagaggacaac
ctcattccagaggaggagttcctgcgcagaaataagggccccgtggcagttaaagtacag
gttcccaacatgcaggacaagacggaatggaagctaaatggccaagtgctaaatttcact
gtccctctcacagaccaggtgtcggttattaaagtcaaaatccatgaagccacaggcatg
ccagcaggaaaacagaagttacaatatgagggcatttttatcaaggattccaactctttg
gcttattacaatatgaacaacggttcagtcatccacttggcactgaaggagagaggtgga
cgaaagaagtga

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