Solea senegalensis (Senegalese sole): 122769572
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Entry
122769572 CDS
T07721
Name
(RefSeq) uncharacterized protein zgc:152968 isoform X1
KO
K14570
RNA exonuclease [EC:3.1.-.-]
Organism
ssen
Solea senegalensis (Senegalese sole)
Pathway
ssen03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
ssen00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
122769572
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ssen03009
]
122769572
Ribosome biogenesis [BR:
ssen03009
]
Eukaryotic type
Pre-60S particles
RNases
122769572
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EloA-BP1
RNase_T
KIX_2
Nab2-like_zf-CCCH_
Motif
Other DBs
NCBI-GeneID:
122769572
NCBI-ProteinID:
XP_043882135
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Position
LG5:14134741..14144233
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AA seq
1172 aa
AA seq
DB search
MFPSSGLFAGLICPVSKHGVCERPHCPYKHAFTVRDDVSGSSAVVDSAGVRNYYSSVCAA
PMREETVDDSIQELERINKEIETVRHEVELEQRRLSCYQTIRVDRTNTVCSLSDSKSESA
GKNADKGSCGPSSCTDFYETNTRVRKYVVDNSKPRTDLEYDPLSNFSAGLRSCSASVKEQ
KPKIVQETRLVVQANTPSPESLDSNEDSVLIIDIPPSPDKNLIGIQKPVCVAGNSKVEVE
QTNEFITAEISLDSSPLCFTKAMACQITPCVSVRGAVYNHCDADKGQYHFSVNENKGCEN
IPAVGNVIDLTESLENLESECEKIANLPVYSDQQGQSLNDLKVEESTFQGGLPESELSIR
AAKLKTLQPHNLSSNISFFDKTSHLDSLCRQHTMPTQTMEVPAQNNHCSLENSVSSLVSG
SQDRALINKTSSVIYQEQKEPALVGNHYQTSVICHSHLANGVDSSEPNEQLLVKLGKEDV
IIISSSEEEELNYSDMDLSDSDPMEECYRIFMEANHEDAKGHEEQTSLSDGTMDVEKQEL
TVTPQVLPGKKRVAHEAKHTEQPMAKIRPEPQVLIPLRGPAASGFGSQTSVTSKIQQVQQ
RASMVAASIKGGQAFVSMTSQKKQETQTTAGPSTHAHVDTQPACVQNAYTNYLSLGTAVI
EVGNNLHFILPEGTFPLPVTSSSSPVTSVLTPVRIVPRSNHLSVKQLCHKAAITPVQRYH
TTAPVLIPAQTRKPSLTSASAHSNPAASTTTPPAAHTVVAKPVPTKRKLKQEAAKEKVPH
DLRQRYVNIFTEEFLKTTANVNDAFEKAVAEERTVYNRSANKLKYLSVAVNSLKRLKNLS
ASSAQGRDEVNGHGSKGNIPLHREMLRGNDDMALYEGLKDYLLTEEKLIESNFPVQHPEK
PGCAALFADPKKGITDPLKRICCRCGATYSVSQSGKHVRKEECTYHYGKGVENRVPGGVE
TRYSCCQGVMGAPGCQVFQLHVHDSLSLEGFVSTSPRHSLDKSCPGVYSLDCEMCYTVHG
LELSRVTVVNSSLQVIYDTFVRPDNEVIDYNTRFSGISVEDVKSNKTSIREVHETLLSFI
SADTILIGHGLEMDLCALKLFHGNMVDTSVVFPHRLGPPHKLTLNNLTAEYLRKIIQESG
GSSWITCSHHNSVMIQIKTKLQSYLSVNKMYV
NT seq
3519 nt
NT seq
+upstream
nt +downstream
nt
atgtttccctcgtctggtctctttgctggtttaatatgtcctgtttctaaacatggggtt
tgtgagcgacctcattgcccatacaaacacgctttcacggtgcgggacgatgtgtctggt
tcctccgcagtggtcgactcagcaggagtcagaaattactactcatctgtctgtgctgca
ccaatgagagaggagactgtagatgatagcatccaggagctggaacggatcaacaaagag
attgagactgtcaggcatgaggtggagctggagcaacggcgactgtcatgctaccagacc
atacgggtggaccgcacaaatactgtgtgtagtctttctgattccaagtctgaaagtgct
ggtaaaaatgcagacaaaggctcttgtggaccgtcttcatgcacagacttttatgagaca
aacacccgagtaagaaagtatgttgttgacaactcaaaacccaggactgacttggagtat
gacccattgtccaacttttccgctggtttacggtcttgcagcgcctctgttaaggagcag
aaacctaaaattgtgcaagaaacaaggctagttgttcaggctaataccccctctcctgag
agtcttgactcaaatgaagacagtgtcctgattattgacattcctccctcacctgacaaa
aacctaattggaattcagaaacccgtttgtgttgctggcaactccaaggtcgaagtagaa
caaacaaatgagttcataacggcagaaatttcacttgattcttcaccattatgctttaca
aaagctatggcatgccagatcacaccatgtgtatcggtgcggggggcagtttataatcat
tgtgatgctgacaaaggccaatatcatttcagtgtgaatgagaacaaagggtgtgaaaat
ataccagctgttggtaatgtaattgacctgactgaaagtttagagaatctggaaagtgag
tgtgagaaaattgcaaatctacctgtctattcagaccaacaaggtcagagtttgaatgat
ctgaaggtggaagaaagcacatttcaaggtggactgcctgaaagtgagctatccattagg
gctgcaaaactgaaaacactacagccacataatctttcctcaaatatttcattttttgat
aaaacttcacacttggattcactgtgcaggcaacacaccatgccaacccagacaatggag
gtgccagctcagaacaaccactgctctcttgagaatagtgtgtcgtcactggtttcaggc
agccaggatagagcactcattaacaagacctcatctgtaatatatcaggagcaaaaagaa
ccagctttagttggcaaccattatcaaacatctgtcatctgtcactcacatttagcaaac
ggagtcgattcatctgaacccaatgagcagcttttagtcaaattgggcaaagaagacgtt
attatcatctccagctccgaggaggaagagctcaattattctgacatggacttgtctgac
agcgacccaatggaagaatgctacaggatcttcatggaggcaaatcatgaagatgcgaag
ggacatgaggagcaaaccagtttgtcagatggaactatggatgtagagaagcaggagttg
actgtcactccccaagtgttaccaggaaagaagagagtggctcacgaagccaaacataca
gagcagccaatggcgaagatcagacctgagcctcaggtattgatccccctgcgtgggcca
gcggcttcaggatttggctcccagacctcagtcacttcaaagatccagcaggtacagcaa
agagcctccatggtggctgcttcaataaagggtggtcaagcatttgtctccatgacctct
cagaagaagcaagagacccagactactgctggtccttccactcatgcccatgtagacaca
caacctgcctgtgtgcaaaatgcttacacaaactacctatctttgggaactgctgtgatt
gaagtaggcaataacttgcacttcatcctcccagagggcaccttccctttgcctgtaact
tcaagttccagccctgttacctcagtgttgactccggtcagaatcgtgcccaggagcaat
catcttagtgtgaaacaactttgtcataaagctgcaataacccctgtgcaaagataccac
acaacagcgcctgtgctcattcctgctcaaactcggaaaccttcactaacctctgcctca
gcacattcaaatccagctgcctccactactactcctcctgctgcccatactgttgttgcc
aagcctgtgccaactaaacgtaagctgaagcaagaggccgccaaagaaaaagttccccat
gatctcagacagcgatatgtcaacatatttacagaggagttcctcaaaacaacagccaat
gtcaatgatgcctttgaaaaagctgttgctgaggagcggacagtgtacaatcgcagtgca
aacaagctgaaatatttgagtgtggctgttaattcactaaagagactgaagaatctgagc
gcttcttcagctcaaggtagagatgaggtaaacggtcatggatccaaaggcaacatacca
cttcaccgggagatgttgagaggaaatgatgatatggcattgtatgagggtttgaaggat
tatcttttgactgaggaaaagctaattgagagcaacttccctgtccagcacccagagaaa
cctggctgtgctgctctgtttgctgaccccaaaaaaggcatcacagaccctctgaagagg
atctgctgtcgatgtggggccacgtactctgtgagccaatcaggcaaacatgttcgcaag
gaggagtgtacctatcattatgggaaaggagttgaaaatagagtgccaggtggagtggag
actcgctacagttgctgtcaaggagtcatgggagcacctggatgtcaggtgtttcagttg
catgtccatgactccctcagcctagaagggtttgtgtctaccagccccagacattccttg
gataagagctgtccgggggtctactctttggattgtgaaatgtgttacactgttcatggt
ctggagctgtccagagtgacggtggtcaactctagtctgcaagttatctacgacaccttc
gtcagacctgataatgaggtcatcgattataacacaaggttttcaggcatcagtgtggag
gatgtgaaaagtaacaaaacttcgatcagagaggtgcacgagaccttattgagcttcatt
agtgccgacaccattctgatcggacatggcctggaaatggacctctgtgccctgaagtta
tttcatggcaatatggtggacacctcagtggtcttcccccaccgcttgggcccccctcac
aagcttaccctcaacaacctcactgctgaatacctgcgcaagatcatccaagagagtggt
gggtcatcatggattacttgcagccaccataacagtgttatgatccaaataaagacaaag
ttacagtcatatttgagtgtaaataaaatgtatgtctga
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