Solea senegalensis (Senegalese sole): 122769631
Help
Entry
122769631 CDS
T07721
Symbol
thoc5
Name
(RefSeq) THO complex subunit 5 homolog
KO
K13174
THO complex subunit 5
Organism
ssen
Solea senegalensis (Senegalese sole)
Pathway
ssen03013
Nucleocytoplasmic transport
ssen03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ssen00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
122769631 (thoc5)
09122 Translation
03013 Nucleocytoplasmic transport
122769631 (thoc5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ssen03019
]
122769631 (thoc5)
03041 Spliceosome [BR:
ssen03041
]
122769631 (thoc5)
Messenger RNA biogenesis [BR:
ssen03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
122769631 (thoc5)
Spliceosome [BR:
ssen03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
122769631 (thoc5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FmiP_Thoc5
Motif
Other DBs
NCBI-GeneID:
122769631
NCBI-ProteinID:
XP_043882255
LinkDB
All DBs
Position
LG5:complement(9901811..9910106)
Genome browser
AA seq
684 aa
AA seq
DB search
MASDALKKRKAKVLRSEGGTPEMKRGRAEGDQQESRVYNEEVELDGRDPEQDYLQYKESC
ESLATLMNEIQELKANGAKEGCAEVEQRRMQSCIHFMNLKKLNRLAHMHLKRGRDLTHEA
KQKVDVLHLQLQNLLYEVMHLQKEISKCLEFKSKHEEIDLVPVEEFYEGAPQEISRPHLT
KNDPHQLTLARLDWELEQRKRLAEEYKESQATKEKTQKTIEEKKEHLTSLQPGLNAIMQA
SLPVQQYLAMPYEQTQKQTEISRHLPPPLYVLFVQANAYGQACDKNLCVSINGDVDEAKA
LSKPPEDSQDDDSDSDAEEEQEKTKRRRPTAGGQLDDKRREMLKRHPLSLCLDLKCKDGS
VLHLFFYYLMNLNIMTVKTKVSTATDLSTAISAGDLLKSDTLLSCLYTGDQGRETPNPAN
RYQFDKVGIVCFADYLEELGHPYKWVQSLGGLHFPSDVTEAVCVGSSLSASHMESTMKLL
RARVQSRLALHKQFASLEHSIIPVSSECQHLFPAKIISRLARWTTITQEEYMELPYTCHV
TEAGLAKETDLYFMGVVERGTARLQAAVVLSPRYPEISPVFSLSLSWKGERTGRTDDNLR
AIESEVNVFKNELQGPRPGHQLLTNQFVRLCVCLDVYLETEEHDDGVEGPREFPREKMCL
RTVRGPNRLKPFKYNHPQGFFSHR
NT seq
2055 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcagacgccctgaagaagcgaaaggcgaaggttcttcgcagtgaaggaggaacc
ccggagatgaaaaggggtcgcgctgagggggatcagcaggagtcacgtgtttataatgag
gaggtggagctggatggcagagaccctgagcaagactatcttcagtacaaagagtcgtgt
gagagtttggccactctcatgaatgagattcaggagctcaaagctaatggagccaaggag
gggtgtgctgaggttgagcagagacgtatgcagagctgcatccacttcatgaatctgaaa
aaactgaatcgtctggctcatatgcatctcaagagaggcagagatctaacacatgaggca
aagcagaaggtggatgtactgcatctgcaattgcagaacctgttgtatgaagtcatgcat
cttcagaaggagatcagcaagtgtctagagttcaagtccaaacacgaggagatagacttg
gtacctgtggaagagttttatgagggggctccacaggaaatttccaggccccacctcact
aaaaatgacccccaccaactcacattggctcgactggactgggagcttgaacagcgaaag
aggttggcagaggaatacaaagagtcccaggccactaaggagaagacccagaagaccatc
gaggagaagaaggaacatctgacaagcttacaaccggggctgaatgcaatcatgcaggcc
tctctgccagtgcagcagtacctagctatgccttatgaacagacacagaaacagactgag
atctcccgccatctccctccaccactgtatgtcctgtttgttcaagcaaatgcctatgga
caggcatgtgataaaaacttgtgcgtgtcaatcaacggtgacgtggatgaagccaaggct
ttgtctaaacccccagaagattctcaggatgacgacagtgattcagatgcagaggaagag
caagagaaaacgaagaggagacggccaactgctggaggccagctggacgacaaaagacga
gagatgctgaaaagacaccctctgtccctctgcttagacctcaaatgcaaagatggcagc
gtcctccatctcttcttctactacctgatgaatctgaacataatgacagtcaagaccaaa
gtctctaccgccacagacctaagcacggccatcagtgcaggggatttgttgaaatcagac
actctgctcagctgtctctacacgggcgaccagggacgggaaacacccaatcccgctaat
cgataccagtttgacaaagtcgggatcgtttgctttgctgattatctggaggagctgggc
catccctacaagtgggttcagagtcttggaggattacattttcccagtgatgtaacagag
gctgtgtgtgtgggcagttcactgagtgccagccacatggagagcaccatgaagctgctg
cgggcacgagtccagtcccgcttggctttgcacaaacagtttgcctcgttagagcacagc
atcatccccgtctccagtgagtgtcagcacctctttcctgccaaaatcatctcccgttta
gctcgctggaccaccatcactcaggaggagtatatggaactaccatatacatgtcatgtg
actgaggctgggctggcaaaggagactgatctgtactttatgggagtggttgaaagaggc
acagctcgtctccaggcggcagtggtgctcagtccccgttaccctgagatctctccagtt
ttctccctctctctcagctggaagggagagcgcactggacgcaccgatgacaacctccga
gccatagagagtgaggtcaacgtgttcaaaaacgaactgcagggacctcgtccggggcac
cagctcttgactaaccagtttgtccgcctttgtgtctgcctggatgtgtatttggagacg
gaagaacacgacgatggtgtggaaggaccacgagagttcccccgtgaaaagatgtgcttg
cgcactgtcaggggaccaaatcgtctgaagccgttcaagtacaaccatcctcagggcttc
tttagtcatcgctaa
DBGET
integrated database retrieval system
