Solea senegalensis (Senegalese sole): 122769637
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Entry
122769637 CDS
T07721
Symbol
ercc8
Name
(RefSeq) DNA excision repair protein ERCC-8
KO
K10570
DNA excision repair protein ERCC-8
Organism
ssen
Solea senegalensis (Senegalese sole)
Pathway
ssen03420
Nucleotide excision repair
ssen04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
ssen00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
122769637 (ercc8)
09124 Replication and repair
03420 Nucleotide excision repair
122769637 (ercc8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ssen04121
]
122769637 (ercc8)
03400 DNA repair and recombination proteins [BR:
ssen03400
]
122769637 (ercc8)
Ubiquitin system [BR:
ssen04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
122769637 (ercc8)
DNA repair and recombination proteins [BR:
ssen03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
Cul4-CSA complex
122769637 (ercc8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
WD40_MABP1-WDR62_2nd
Beta-prop_EML_2
Beta-prop_TEP1_2nd
EIF3I
Beta-prop_RIG_2nd
Beta-prop_EIPR1
Beta-prop_CAF1B_HIR1
Beta-prop_WDR75_1st
Beta-prop_TEP1_C
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
WDR55
NBCH_WD40
ANAPC4_WD40
WDR90_beta-prop_4th
WD40_MABP1-WDR62_1st
Beta-prop_IFT122_1st
Beta-prop_WDR75_2nd
WD_LRWD1
Beta-prop_RIG_1st
Beta-prop_WDR19_1st
Beta-prop_IFT140_1st
Beta-prop_Vps41
Motif
Other DBs
NCBI-GeneID:
122769637
NCBI-ProteinID:
XP_043882269
LinkDB
All DBs
Position
LG5:complement(11828222..11838472)
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AA seq
401 aa
AA seq
DB search
MLGFLTARQAGLDDPLRLRRAESTRRVFGLELNPDRDVDRIHGNGINTIDIEAVEGRYML
SGGSDGIIVVYDLENYSGKPQYTCKAVCTVGRSSRYVHKFSVETVQWYPYDTGMFVSSSF
DKTMKVWDTETLKPAEVFEFEGNVYSHHLSPIARKHSLIAVGTKYPKVQLCDLKSGSRSH
VLQGHRAEVLSVRWSPRYEHILATASADSKVKVWDVRRASGSLLDLDQHKGDKSKASTEA
VNTAHNGRVNGLCFTGDGLYILTTGTDDRMRLWNSATGENTLVNYGKVCNESRKKLQFAV
SRGCSPEFVFVPCGSSVAVYALHTGELVTMLRGHYNNVDCCEFHPDYQELYSGGKDCNIL
AWVPVLHASAVEDESNSSNKDAASQPSVNPALQDAWSSDED
NT seq
1206 nt
NT seq
+upstream
nt +downstream
nt
atgttggggtttctgacagcaagacaggctggactggatgacccactgcgattgcgacgt
gcagagtcaacgagaagggtttttggactggagttgaatcctgacagagatgtggaccga
atccatggcaatggcattaacacaatagacattgaagcagtagagggcagatacatgttg
tctggaggttcagatggaatcatcgttgtgtatgacctggagaactacagtggcaaacca
caatacacctgcaaggcagtctgcacagtcggcaggtcgagtcggtatgtccacaaattc
agtgttgagacagttcagtggtatccttatgacacaggaatgtttgtctcaagttctttt
gataagaccatgaaggtctgggacactgagacattgaagcctgctgaagtctttgagttt
gagggaaatgtctacagccaccacttgtcccccatcgccaggaagcacagtctcattgca
gttggcaccaaataccctaaagtccagctgtgtgacctgaagtctggttcacggagtcat
gttcttcagggtcacagagcagaagtcctgtctgtgcggtggtcgcctcgatacgagcac
atcttggccactgccagtgcagacagcaaggtgaaagtgtgggatgtacgtcgggcttct
ggtagtctcctcgacctggaccagcacaaaggagataagtcaaaagcctccacagaagca
gtaaacacagcgcataatggcagagtgaatggcctgtgcttcactggcgatggcctctac
atcctcacaactggaactgatgaccgtatgagactgtggaatagtgccactggggaaaac
acgctggtgaattatgggaaggtctgcaacgagagtcgtaaaaagcttcagttcgcagtg
tcgcgtggctgcagccccgagtttgtatttgtgccgtgcggcagctccgttgcagtctat
gcccttcacactggagagcttgtcacgatgctccgggggcactacaacaatgtcgactgc
tgcgagttccacccagactaccaggagctgtacagtggaggtaaagactgtaacatcctg
gcatgggttcctgttcttcatgcctcagctgtggaagatgagtccaacagttcaaacaag
gacgctgctagccagccttcagtgaaccctgccttgcaggatgcatggagcagtgatgaa
gattaa
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integrated database retrieval system
