Solea senegalensis (Senegalese sole): 122769670
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Entry
122769670 CDS
T07721
Name
(RefSeq) LOW QUALITY PROTEIN: ubiquilin-1-like
KO
K04523
ubiquilin
Organism
ssen
Solea senegalensis (Senegalese sole)
Pathway
ssen04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
ssen00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
122769670
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ssen04131
]
122769670
03051 Proteasome [BR:
ssen03051
]
122769670
Membrane trafficking [BR:
ssen04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Selective cargos
122769670
Proteasome [BR:
ssen03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
122769670
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UBQLN1
ubiquitin
STI1-HOP_DP
UBA
UBA_NBR1_C
DUF7172
Wzz
Motif
Other DBs
NCBI-GeneID:
122769670
NCBI-ProteinID:
XP_043882324
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Position
LG5:complement(9738661..9745008)
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AA seq
570 aa
AA seq
DB search
MSDAGTDELWPSGECQETEMIHVSVKSLMESNDFTVRCDCTVRQLKWDLSDRLGSPAEQL
VLIHSGRVLRESEILSHLKRQSESVRLCMIQRPQGSSSVPSGDVTSETVQSEVTDVLDPE
TLTPSPTSPFCLVEGLGSLGLANSGPCLFTALQCQMEEQLLDDPEMMCRVVGSPLVQSTL
STSGAQITRQLILSNPQVQQLLQTNPEVGDMLSDTDIIEQVQELLRNPDMIEEVMRNEER
TLASCKLQPQQDGRETVSGDSGDLQETEAKVQTGLPQVATLSSGNQQTLKAEPERDQTPA
PESSHCTDPLRKLTPDPNPQSNISTGKANMQITRFSSAKHFSSVLITLYLWPCSSAASGM
QSLLEEITASPGLMESLLSGPHVSSLLNCLSQNPDLASQMLLSHPLFSGNPQLQQQMRQQ
LPFFLQQMQSPELLSAMLNPRAMEALLQIQQGLQTLAAEAPAFIPAAGLGNTGAKVGVAP
DLTSNSVLNGQSGNCSQVATETEQQQQQFVHQMLQALTNTSNGVCHEEAEFQEELEYLSS
MGFRDRRANLQALISTRGDLTTAIQQLCGL
NT seq
1713 nt
NT seq
+upstream
nt +downstream
nt
atgtcagacgcagggacagatgaactgtggccgtcaggtgaatgccaggagactgaaatg
atccatgtttctgtcaaaagtctaatggagagcaacgacttcactgtccgctgtgactgt
actgtcagacagctgaagtgggacctatcggatcgtctcgggagcccagcagagcagctg
gtgctgatccactctggtcgagtcctcagagagtcggagatcctgagtcaccttaaaaga
cagagtgagtcagtcaggctctgcatgatccaaaggcctcagggttcgtccagtgtgccc
tctggtgatgtaacctcagagacggtccagtcagaggtcaccgatgttcttgaccctgaa
accctgacaccatctcccacctctcccttctgtctggtggaaggtttgggcagtcttggc
cttgcaaacagtggaccctgcctcttcactgcactccagtgccagatggaggagcagctt
ttggatgacccagagatgatgtgccgtgttgtgggcagcccactagtgcagagcacactc
tccacctccggtgcccaaataaccaggcagctcattttgtctaatccccaagtccagcag
ctcctccagacaaatccagaggtgggagacatgcttagcgacacggacatcatcgaacag
gttcaggagctcctcaggaaccctgacatgatagaggaagtgatgcgtaatgaagagagg
acactggcgagttgcaagttgcagccgcagcaggacggtcgtgaaaccgtctctggtgac
tctggtgatcttcaggaaactgaagcgaaagtacagacaggattaccccaggtggccact
ctctcatctggcaatcagcaaacactcaaagcagagccagagagggaccagacaccggcc
cccgagtccagtcactgcacagaccctctcagaaaactgacacctgatccaaacccacag
agcaatatctctacgggcaaggctaatatgcagatcacaaggttttcatcagctaaacat
ttctcctcggttttaatcactctgtatctatggccttgttcctccgctgcctcaggaatg
cagtccctgctggaggagatcacagccagtccaggtctgatggaaagcctcctctctggg
ccgcatgtaagcagtcttctgaactgcctcagccagaatcctgatctggcttcacagatg
ctgctgagccaccctttgttctcagggaatcctcagttacagcagcagatgagacagcag
ctccctttcttcctccaacaaatgcagagtccagagctactgtcagccatgttgaacccg
agagccatggaggctctgctacagatccagcagggactgcagacactagctgcagaggct
cccgccttcatacctgcggctggactcggaaacactggtgccaaagtcggcgttgctcct
gatctcacatctaactctgtcctcaacggccaatcaggaaattgttctcaggttgccacg
gagacagagcagcagcagcagcaatttgtacatcagatgctacaggccctgaccaacacc
agtaatggagtctgtcacgaggaggcggagttccaggaggaactggagtacctgagctca
atgggcttcagggacagacgggcaaacctgcaggctctcatcagcacgagaggagacctc
accactgctatacaacagctgtgcggtctctga
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