Solea senegalensis (Senegalese sole): 122769716
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Entry
122769716 CDS
T07721
Symbol
gapvd1
Name
(RefSeq) GTPase-activating protein and VPS9 domain-containing protein 1 isoform X1
KO
K27566
GTPase-activating protein and VPS9 domain-containing protein 1
Organism
ssen
Solea senegalensis (Senegalese sole)
Brite
KEGG Orthology (KO) [BR:
ssen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ssen04131
]
122769716 (gapvd1)
Membrane trafficking [BR:
ssen04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
122769716 (gapvd1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RasGAP
VPS9
DUF5601
Motif
Other DBs
NCBI-GeneID:
122769716
NCBI-ProteinID:
XP_043882421
LinkDB
All DBs
Position
LG5:25641660..25664918
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AA seq
1484 aa
AA seq
DB search
MVKPDIHTLAHHLKQERLYVASEKQLIQRLNCDVLKTAERLFRAAWIAKQQRINLDRLIL
TSAEASPAECCQHAKMLEDTQFVDGYKTLGFQETIYGEFLARLRENPRLVASCLVAGERL
NQEHTQGVIHNVFTSLYGNCIMQEDESYLLQVLRYLVEFELKESDNPRRLLRRGTCAFSI
LFKLFSEGLYSAKLFLTATLHEPIMQLLVEDEDHLETDPAKVTERLTPAQQERFGEKGSE
GYKQRVQAAVEANEAKLVALVNKFIGYLKQNTYCFPHSLRWIVSQMYKTLSCVERLEVGE
VRTMCTDLLLTCFICPAVVNPEQYGIISDAPINEVARFNLMQVGQLLQQLAMADDDADPR
RKSSLSKFDKSCVAAFLDVVIGGRAVETPPMSSMNLLEGLSRTAVYITHNHLLALVDFVR
GVTAGDHLREEEHMALENLLANVPQSRTVKSNSLELTPSNTPQLSPATTPANKKNRLPIG
QHLAAITSWDPTTTTLSAHIPLVTPFAAARSRSRTNIAQEGEAEASSQESLQELMPEEVL
VISLGTGPQNVPGMMSENEVLNLQLTDGAQGEGQADDTKLHGKPDKTLRFSLCSDNLEGI
SEGPSNRSNSVSSLDLEGESVSELGAGPSGSNGVEALQLLEHEQATTQDNLDDKLRKFEI
RDMMGLTDDRDISETVSETWSTDVLGSDFDPNMDEDRLQEIAGAAAENMLGSLLCLPGSG
SVLLDPYGSTISETTSEAWSVEVLPSDSEAADLKQEERLQELESCSGVGSTSDETEVREV
SSRPSTPGLSVVSGISATSEDIPNKTEDLRSECSSDFGGKDSVTSPDGEESGHGAHHLTS
PPSQADSLLAMFDPLSSGEGTGTIVRPKVHYARPSHPPPDPPIPEASALGQETRHSLFMP
HCLAQAELEHTKQRHSFPDRLVRSRSSDIVCPGRRPTSDPGLNRRVAVEDRDPAGSFALG
PSSSPSKDSLKGEAEDRKDSDDEKSDRNRPWWKKRFVSAIPKVLYWTAESDVPAPIAAFR
KRDKQERDDIAQERVPQDDPLPRHSTQAQAAEDILDKYRNIKRPSPSDGAAGGASYDGAG
DLCVEDNLHDSPREDTLQNISTDDLPDSASQTAQQHDSKFSFSDAKKKLRLALCSADSVA
LPIMAPVTTRNGLPDHMDPEDNEIVCFLKVQLAEAINLQDKNQMAQIQETTRCVGRFDAR
TCRKLLAAIAEDYRKRAPYIAYLTRCRQGLQTSQAHLERLLQRVLRDKEVANRYFTTVCV
RLLLEHMECKMLDFIKAFQGCTASDDKTAAVEDFLRYLYGAMARDAIWQYASEDQLQDAQ
MAIERSVMNRIFKLAFYPNQDGDILRDQLFHEHIQRLSKVVTATHKALQIPEVYLKEAPW
PSAQGEIRTINAYKTPRDKVQCILRMCSTIMNLLSLANEDSVPGADDFVPVLVFVLIRAN
PPCLLSTVQYINNFYASRLSGEECYWWMQFTAAVEFIKTIDDRK
NT seq
4455 nt
NT seq
+upstream
nt +downstream
nt
atggtgaagccagacatccacactctggcccaccacctgaagcaggaacggctgtatgtg
gcatcagagaaacagctaatccagaggctcaactgtgatgtgctgaagacagctgagagg
ctgttccgagcagcatggatcgccaagcagcagaggatcaacctggatcgtctcattctc
accagtgcggaggcctcacctgccgagtgctgccaacatgccaaaatgctggaagacaca
caatttgtggatggctacaagacactgggcttccaggagacgatctatggcgagtttttg
gcccggctgagagagaaccccagactggtggcttcctgtctggtggcaggggagaggctg
aaccaggagcacacccagggggtcatccataacgtctttacctcactttatggcaactgt
attatgcaggaggacgagagctatttgctccaggtgttgcggtacttggtagagtttgaa
ctgaaagagagcgataacccacggcgcctgctgcggcgggggacctgtgccttcagcatt
ctttttaaactcttctcagagggcctatactcagccaagctcttcctcactgccaccctc
catgagcccattatgcagctgctagttgaagatgaagatcacctggagacagacccggcc
aaggttacagagcgcctcactccagcccagcaggaacgctttggcgagaagggctctgag
ggctacaaacaaagggtgcaggcagctgtggaggcgaatgaagcgaagctggtagctctg
gtcaacaagtttattggttacttgaagcagaacacctactgcttcccacacagcctgcgc
tggattgtgtcccagatgtacaagacgttgtcatgtgtggagcgtcttgaagtgggcgag
gtgcgaaccatgtgcacggacctgctgttgacctgcttcatctgtccagctgttgtcaac
ccggaacaatatggtatcatctctgacgcccccatcaacgaagttgcccgcttcaatctg
atgcaggtggggcagcttttgcagcagttggccatggccgatgatgatgcagacccaagg
cggaaaagcagtttgtcgaaatttgacaagagttgcgttgctgcatttctggatgtcgta
attgggggaagagcagttgagaccccacccatgtcctcgatgaaccttctcgaaggcctc
agcaggactgccgtctatattacccataaccatctgctagctctggtggactttgtgcgt
ggtgtgacagcaggagaccacctccgggaggaggagcacatggccctggagaatctgctg
gccaatgtgccccagtctcgaactgtgaagagcaacagtttggagctcacaccctccaac
accccccagctctccccggccaccactcccgccaacaagaagaacagactccccatagga
caacacttagctgccataacatcctgggaccccacaaccaccacactgtctgcccacatt
ccattagtaaccccttttgcagctgctcgtagccgcagccgtaccaacatagcccaggag
ggggaggcagaggccagctcccaagagtctttacaggagctgatgccagaggaggtgctt
gtgatttcactcgggactggtcctcagaatgtccctgggatgatgtcagagaatgaggtt
ttgaacctccagctgactgatggggcacagggtgaaggccaggctgatgataccaaactg
catggcaaaccggacaaaaccttgcgcttttccctctgcagtgacaacctggaaggaatc
tcagagggtccatccaatcgttccaactctgtgtcatctctggacctggagggagagtct
gtttctgagctcggagctggaccatcagggagcaatggagtggaggctctacagcttttg
gaacatgaacaggccaccacccaggacaacctggatgacaaactccgcaagtttgaaatt
cgggacatgatgggtctgaccgacgatcgggacatctctgagacggtcagtgaaacctgg
agcaccgatgtgctcggtagcgactttgacccaaacatggatgaggatcgactgcaggaa
atagcaggggcggctgcagagaacatgcttggcagtttgctgtgtcttcctggctcgggt
tcagtgctgctggatccctatggctccactatctccgagaccacaagcgaggcctggagt
gtggaggtcctgcccagtgactcggaggctgcagacctgaagcaggaggagcgactgcag
gagctggagagctgctcaggtgttggcagcacctcggatgagacagaggtcagagaggtc
agctcaagacccagcacaccaggcctcagtgttgtttcaggtatcagcgcgacctcggaa
gacatccccaacaagacggaggacctgcggtcagagtgcagctcagattttggtggaaag
gactcagtgaccagtccagatggggaggagtcaggccacggagcacaccatctgacatct
ccgccctcacaggcagattccttactggccatgttcgatcccctctcctctggtgaagga
actggaacaatagtgaggccgaaagtgcattatgccaggccctctcaccctccacctgac
cctcccatccctgaagccagtgccctggggcaagagacacgccactctctcttcatgccc
cactgcttggcccaggctgagctggagcacaccaagcagcggcactccttccctgacagg
ctggtccgcagccgcagctctgacattgtgtgtccaggccgccggcccacaagtgatcct
ggcctaaaccggcgtgtagcagttgaagatcgtgaccccgccgggtcctttgccttagga
ccttcctcgtcccccagcaaggattccctgaagggagaggccgaggacaggaaagacagt
gacgacgagaagtctgatcgcaacagaccgtggtggaagaaacgctttgtgtcggccatt
cccaaagtgctgtattggacggctgagagtgacgtcccagcgccaatagcagcattcagg
aagagggacaaacaagagagggatgacattgcccaggagcgtgttcctcaagatgaccca
ctgcccagacatagcactcaagcacaggcagccgaagacattttggacaagtacaggaac
atcaagaggcccagcccgagtgatggagctgcaggtggagcttcctatgatggtgctgga
gatctttgtgttgaagacaacttgcatgactctccaagagaagatactctgcagaacatt
tccacggacgacctcccagactcggccagccagacggcacagcagcacgactcaaagttc
tctttcagcgatgcaaagaagaagttgaggttggcattgtgttccgcagactctgtggct
ctgcccatcatggcccccgtaaccacacgaaatgggctccctgaccacatggatcctgaa
gacaacgaaatcgtctgcttcctgaaggtccagctcgcagaagccatcaacctccaggat
aagaaccagatggcgcagatccaggagaccacgcgctgcgtcggccgcttcgacgcacgc
acctgcaggaagctgctggctgccattgcagaggattacagaaagcgggcaccgtatata
gcttatctaacccggtgccgtcagggcctgcagacgtctcaggctcatctggagaggctc
ctgcagagggtgctgagagacaaggaggtcgcaaaccgctacttcaccaccgtctgtgtc
cggctccttcttgaacacatggaatgcaagatgcttgactttattaaggcgttccagggg
tgcacggcgtcagacgacaagacggcagcagtggaggatttcctgcgctacttgtacggt
gctatggcccgtgatgccatttggcagtacgcaagcgaggaccagctgcaggacgcccag
atggctatcgagcgcagcgtgatgaaccgcatcttcaaactggcgttctaccccaaccag
gatggagatattctcagagaccagcttttccacgaacacatccagaggctctcaaaggtg
gtgacagccactcataaagcacttcaaatcccagaggtttacttgaaggaggctccgtgg
ccctcagctcagggtgagatccggaccatcaacgcgtacaagactccacgggacaaagtc
cagtgtattctgcgcatgtgttccaccatcatgaacctcctcagtttggccaacgaggac
tccgtccccggagcggacgactttgtccccgtgctcgtctttgtcctcatcagggcaaac
ccgccctgcctgctgtccaccgttcagtacatcaataatttctacgccagccggctgagt
ggggaggagtgctattggtggatgcagttcaccgcggcggtggaattcattaagaccatc
gacgatcgcaagtga
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integrated database retrieval system
