Solea senegalensis (Senegalese sole): 122769845
Help
Entry
122769845 CDS
T07721
Symbol
pole
Name
(RefSeq) DNA polymerase epsilon catalytic subunit A
KO
K02324
DNA polymerase epsilon subunit 1 [EC:
2.7.7.7
]
Organism
ssen
Solea senegalensis (Senegalese sole)
Pathway
ssen03030
DNA replication
ssen03410
Base excision repair
ssen03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ssen00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
122769845 (pole)
03410 Base excision repair
122769845 (pole)
03420 Nucleotide excision repair
122769845 (pole)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ssen03032
]
122769845 (pole)
03400 DNA repair and recombination proteins [BR:
ssen03400
]
122769845 (pole)
Enzymes [BR:
ssen01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
122769845 (pole)
DNA replication proteins [BR:
ssen03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase epsilon complex
122769845 (pole)
DNA repair and recombination proteins [BR:
ssen03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase epsilon complex
122769845 (pole)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF1744
POL2_thumb
DNA_pol_B_exo1
zf_DPOE_2
zf-DPOE
DNA_pol_B
DNA_pol_B_exo2
RNase_H_2
APP_N
CENP-B_dimeris
Motif
Other DBs
NCBI-GeneID:
122769845
NCBI-ProteinID:
XP_043882652
LinkDB
All DBs
Position
LG5:complement(7762081..7780798)
Genome browser
AA seq
2275 aa
AA seq
DB search
MVLQNSGRYKAERGQGGDQDNQDDGSAMSALKRLERSQFTDEMDARFGFDRVKEPGEKTG
WLINIHPTEILDEDKRMISAVDFYFIQEDGNRFKVALPFKPYFYVATKRNCDREVISYLS
KKFQGKVTKLEILAKEDLDLPNHLVGLKRSYIKLSFNTVDDLIKVKREIAPAVRKNRERE
QSNDAYTSMLSSALAGGSLISADEEGTSKSISDQLDNIVDMREYDVPYHVRVSIDLKIHV
AHWYNIRYRGSAYPPEIVRRDDLVERPDPVVLAFDIETTKLPLKFPDAETDQIMMISYMI
DGQGFLITNREIVSENIEDFEFTPKPEYEGPFTVFNEDDEEALIKRWFDHVQETKPNIFV
TYNGDFFDWPFIETRATLHGLNMYREIGFQKDNQGEYKSSQAIHMDCYRWVKRDSYLPVG
SHNLKAAAKAKLGYDPVELDPEEMCRMATEESQTLATYSVSDAVATYYLYMKYVHPFIFA
LCTIIPMEPDEVLRKGSGTLCEALLMVQAFHANIIFPNKQEQVFNKLTDDGHVMDSETYV
GGHVEALESGVFRSDIPCRFKMNPAAFDFLLQRVERTMRHAIEEEEKIPLEQVTNFNEVC
DEIKKKLTSLKEVPNRIECPLIYHLDVGAMYPNIILTNRLQPSAMVDEATCAACDFNKPG
ATCQRRMAWQWRGEIMPASRSEFHRIQQQLESEKFPPFFPNGPPRAFHNLNREEQAKHEK
KRLSEYCRKAYKKVHVTRLEERVTTICQRENSFYVDTVRAFRDRRYEFKGLHKVWKKKLS
SAQDSGDAAEVKRCKNMEILYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGIVCFTGA
NIITQARELIEQIGRPLELDTDGIWCVLPNTFPENFVVKTSNEKKPKVTISYPGAMLNIM
VKEGFTNDQYHELVDPASLTYVTRAENSIFFEVDGPYLAMILPASKEEGKKLKKRYAVFN
EDGSLAELKGFEVKRRGELQLIKIFQSSVFEAFLKGTTLDEVYESVAKVADYWLDVLYSK
AANMPDAELFELISENRSMSKRLEDYGELKSTSISTAKRLAEFLGDQMVKDAGLSCRYVI
SRKPEGSPVTERAIPLAIFQAEPSVKKHFLRKWLKTPSLHDLDIRSILDWSYYIERLGSA
IQKIITIPAALQQVKNPVPRVRHPDWLHKKLLEKNDIYKQKKISELFSSEGKRQVARQPL
EAGQAADMEDFGMPARPLQPAILISTKRKRASQGDDSQVESQDLELTQSWREILGPPPPM
GKTREAHLVWLRYHKKKWELQIRQRKERRKKRRLLDGEAQSVGGGVIRDGPTTGLGSFLR
RTARSILDMPWQIVQIAETSHPGLYKLWAVIGNDLHCMKLNIPRVFYVNQKVPKQEEGAT
YKKVNRLLPRSNVVYYLYKYCVPEDMYQEHINQINADLSAPDIEGVYETQVPLLFRALVQ
LGCVCMVNKHVVRDLGGREADTFDLEHLEMRSLAQFSYLEPGSVRHMYLYHHSQGHKALF
GLFIPSQRKASIFVLDTVRSNQMPNLSNLYTAERTALLEKTTEELLPPEKHNFEVRAEND
AKAIYRALQRVLLSYKDERRGPTLIAVQSNWELRRLAAGMPVLEEFPVVPVHVADEISYN
VLDWQRLGARRMIRHYLNLDSCLSQAFDMARYYHLPVGNLPQDVSIFGSDLFLARHLRKH
NHLLWLSPTARPDLGGKEADDSRLVMESDDRGSVEINAQGCYSTVCVELDLQSLAVNTIL
QSHHVNDMEGGASVGVSFDVIQQASLEDMMSGNQGASAVASYDETALCSNTFRILKSMVV
GWVREITQYHNVYADNQVMHFYRWLRSPSSLLFDPALHRTLLNMMKKVFLQLVAEFKRLG
STVVYGNFNRIILCTKKRRIDDAIGYVEYITNSIHSREIFHSLSLSFSRCWEFLLWMDPA
NHGGVKGKLPSSVLCGEESAKQKKNSGGEGDEDGSEDEDEEEAEAEEQEETDEVEELIES
NWNIMQYLPQTASCQKYFLMIVSAYIAAVYHSMREELRRNTPGATPIKRRGGSQASQQAV
GDLSALPGMISFSQEYVSSELTHNLFTITQKIQKKVTGTRGVSQPSEMFPVLPGSHLLLK
NPALEFIKYVCQVFSLDANIVNQVNKLKRDLLRLVDVGEFSEEAQFHDPCNSYVLPEVIC
HQCNFCRDLDLCKDPSVAQDGSIEMALVEALQKKLMSYSLQDLVCNKCKGVKEANMPLYC
RCAGDFDLSFSAKSFSEQIAVFRNIASHYNMSFLEETIDWLLEMSPHVSQSAHSM
NT seq
6828 nt
NT seq
+upstream
nt +downstream
nt
atggttttacaaaacagtggaagatataaagcagagcgaggacaaggcggagaccaggac
aaccaggacgatggatccgccatgtctgctctcaagcggctggagcgcagccagttcacc
gacgagatggacgcccgcttcggcttcgacagggtgaaggagccgggggagaaaacaggc
tggctgatcaacatccaccctaccgagatcctggatgaggacaagaggatgatcagtgct
gtggacttttatttcattcaagaggatggaaataggtttaaggtggctttacctttcaag
ccatacttctacgtagccactaaaaggaactgtgacagagaagtcatctcgtacttgtcc
aagaagttccaaggaaaagtgacaaagcttgaaattctcgcgaaagaggacctcgacctg
ccaaaccatttagtgggactgaagagaagctacatcaagctgtcgttcaacactgtggac
gacctcatcaaagtgaagcgagagatcgccccggcagtccgtaagaacagagagagggaa
cagtccaacgacgcctacacctcgatgttgtccagtgcgttggcaggcggcagcttaatc
tccgcggatgaagagggcacgtcaaagagcatttcagaccagttggacaacatcgtggac
atgagagagtacgacgtgccgtatcatgtgcgagtctccatcgatctcaagatccatgtg
gctcactggtacaacatccgctacagaggaagtgcatatccaccagagattgtacggaga
gatgatcttgtggagcgaccggatcctgttgttttggcttttgacatcgagacgaccaaa
ctcccactgaaatttccagatgcagagacggaccagattatgatgatctcctacatgata
gacggacaggggtttctgatcacaaaccgggagattgtctctgaaaacatcgaggatttt
gagttcacccccaaacctgaatatgaaggacctttcactgttttcaatgaagatgacgag
gaggctctcattaagaggtggtttgatcacgttcaagaaacgaagccaaacatctttgtg
acgtacaacggagacttctttgattggccttttattgagactcgagcgacgctgcatgga
ctgaacatgtacagggagattggattccaaaaggacaaccagggagagtacaagtccagt
caggccattcacatggactgctataggtgggtaaagagagacagttacctgccggtgggg
agtcataacctgaaggcagcagcaaaggctaaactgggctatgacccggtggagctggac
ccagaggagatgtgccgcatggctacagaggagtcacagactttagcaacctactctgtg
tcagatgccgtggccacgtattacctgtacatgaaatatgtccatcccttcatcttcgct
ctgtgtacgatcatccccatggagcctgatgaggtgctgcgtaaaggttctgggactctg
tgcgaggccttgctcatggtgcaggccttccacgccaacatcatcttccccaacaagcaa
gagcaggtcttcaacaagctgacggacgacggccacgtcatggactctgagacttacgtc
ggtggccacgtggaggcgctagagtctggtgtgtttcgcagtgacatcccctgccgtttc
aaaatgaacccagctgcctttgacttcctgctgcaaagagtcgaaagaacgatgcgtcat
gctatcgaggaagaggagaaaatccctctggagcaagtcacaaactttaacgaggtttgt
gacgagattaagaagaaactgacttctctgaaggaggtgccaaacaggattgaatgtcct
ctcatctaccatctggatgttggggcaatgtaccccaacatcattctcaccaaccgcctg
cagccatctgcgatggttgatgaggccacttgtgctgcctgtgactttaacaagcctgga
gccacctgtcagaggaggatggcctggcagtggagaggagaaatcatgcccgccagtcgc
agcgagtttcaccgcatccagcagcaactggagtccgagaagttcccgccgttcttcccc
aacggaccaccgcgagccttccacaatctcaacagagaggagcaagccaagcatgagaag
aagcgtttgtccgaatactgtaggaaagcctacaagaaggtacacgtcaccaggctggag
gagcgagtcaccaccatctgtcagagggaaaactccttctatgttgataccgtgagagct
ttcagagatcggcgttacgaattcaaaggactgcacaaggtgtggaaaaagaaactgtcg
tcagctcaggacagtggtgacgctgccgaggtgaagcgctgcaagaacatggagatcctg
tacgactctcttcagctggctcacaagtgtattctcaactctttctatggctacgtcatg
aggaaaggggcgcgctggtactccatggagatggcgggcatcgtgtgcttcactggggcc
aacatcatcacacaagcccgagagcttatcgaacaaatagggagaccacttgagctggac
actgatggtatctggtgtgtcctacccaacaccttccccgagaactttgtggtgaagacg
agcaacgagaagaagcctaaggtgaccatctcctacccgggggccatgctgaacatcatg
gtgaaagagggtttcaccaacgaccagtaccacgagctggtcgaccccgcgtccctcact
tacgtcaccagggcggagaacagcatcttcttcgaggtggacggaccgtacctggcaatg
atcctgcccgcctcgaaagaggaaggaaagaagctgaagaaaaggtatgctgtgtttaat
gaggacggctctcttgctgagctgaagggatttgaggtgaagagaagaggagagctccag
ctcattaagatttttcaatcatcagtgtttgaggcgttcctcaaaggcaccactctagac
gaagtctacgagtctgtggccaaagtggccgactactggctggacgtcttgtacagcaag
gctgccaacatgccagatgcggagctgtttgaactgatttcagagaatcgctccatgtcc
aaaaggctcgaggactacggggagctgaagtccacctccatcagcacggcgaagagactt
gccgagttcctgggagaccagatggtgaaagacgccggtctgagctgtcgctacgtcatc
tcccgaaaaccggagggttcccctgtcacagaaagagccattcccctggccatcttccag
gcagagcccagtgtgaagaaacatttccttcgtaagtggctgaagacgcccagcctgcat
gacttggacattcgctctatcctcgattggagttattacatagagaggttgggtagtgcc
attcagaaaatcataaccatccccgcagctctgcaacaggtgaagaacccagttcccaga
gtgaggcatcctgactggcttcataagaaactgctggagaaaaatgacatttacaagcaa
aagaaaataagtgaattgttcagcagtgaaggcaagagacaggtggctcgtcagcctctt
gaagccggccaagctgcagacatggaggactttgggatgccggccagacctctgcagcca
gcgattctcattagcaccaagcggaagcgagcttctcaaggtgatgacagccaagtagag
tctcaggatctcgaactcactcagtcctggagggagatcctggggccacctccacctatg
ggaaagacacgggaggcgcatctagtgtggctgcgctaccataagaagaagtgggagctg
cagatcaggcagagaaaggagagaaggaagaagaggaggcttttggacggcgaagcccag
tctgtagggggaggtgtgatcagagatggccccaccaccggcctcggaagcttcctgcgt
agaacagcacgtagcatcctggacatgccatggcaaattgtgcagattgcagagacgagt
caccctggtttgtataaactgtgggctgtgattggaaacgacctccactgcatgaagctc
aacatcccacgcgtcttctacgtcaatcagaaagtcccgaaacaagaggagggagccacg
tacaaaaaggtgaaccgcctgctgcctcgctccaacgtggtgtactacctctacaagtac
tgtgtaccagaggacatgtaccaggagcacatcaatcagatcaacgcagacctctctgct
ccggacattgaaggagtctatgaaacacaggtccccttgctgttccgtgcactggtgcag
cttggatgtgtgtgtatggtcaacaaacatgttgtgagggatctgggcggcagggaggct
gacacgtttgacctggaacatctggagatgagatctctggcccagtttagctacctagaa
cctgggagcgttcgccacatgtacttgtatcatcacagccagggtcacaaggctctgttt
ggtctcttcatcccctctcagcgcaaagctagcatctttgtcctggacacagtaagaagc
aaccagatgcccaacctgagtaacctctacacagctgaacgcactgccctcctggagaag
acgacggaggagcttctgcctccagagaaacacaactttgaagtccgagctgaaaatgac
gcaaaggctatctatcgtgcactacagcgcgttctgctgagttacaaggacgagcgtcgc
ggtcccactctcatcgctgtgcagtcaaactgggagctgcggcggttggcggcggggatg
cccgtcctcgaggagtttccagtcgttccagtacatgtggccgacgagatcagttacaac
gtgctagactggcaaaggctcggtgcccggcgcatgatccgccactacctcaacctggac
agctgcctgtcacaggccttcgacatggccaggtattaccacttacctgtgggaaacctg
cctcaggatgtgtccatctttggctcggacttgttcctggctagacatcttcggaaacac
aaccacctgttatggctctcgcccacggccagacctgacctcgggggaaaggaagctgat
gacagtcgcctggtcatggaaagcgatgaccggggctctgtggagattaacgctcaagga
tgctactccactgtgtgtgtggagctggacctgcagagcctggcagtgaacaccatcctg
cagtcgcaccatgtcaatgacatggagggcggagccagtgtgggcgtcagttttgacgtg
atccagcaagcctcgctggaggacatgatgtcaggaaatcagggagcgagcgccgtcgct
agttatgatgagacggcactttgctccaacaccttcagaatcctgaagagcatggtggtg
ggatgggtcagggagatcacgcagtaccacaacgtgtacgcagacaaccaggtgatgcac
ttctaccgctggctgcgctccccgagctctctgctctttgaccctgcgctgcaccgcacc
ctgctcaacatgatgaagaaggtgtttctacagctcgtagcagagttcaaacgtcttggt
tcaactgtggtgtacggaaacttcaacaggatcatcctgtgcactaaaaaacggaggatc
gacgatgcaatcggatatgtggaatacatcactaacagcatccactccagagaaatcttc
cactcgttgtctctgtccttctcccgatgctgggagttcctgctgtggatggacccggcc
aaccacggtggtgtgaagggaaaactgccctccagcgtcctgtgtggagaggaaagtgcc
aaacagaagaaaaacagtggaggggagggtgatgaggacggcagtgaggatgaggacgaa
gaggaagcagaagcggaggaacaagaggagacggatgaggtggaggagctgattgagagc
aactggaacatcatgcagtatctgccccaaacggcctcctgtcagaaatacttcctcatg
attgtgtcggcctacattgcagcagtctaccacagcatgagagaggagctgagacgcaac
actcctggagcgacgccaatcaagaggcgaggaggcagccaggcttcccagcaggcagtg
ggagacctgagtgctcttcctggaatgatctccttctcccaggagtacgtgtccagtgag
ctgacgcacaaccttttcaccatcactcaaaaaatccagaagaaggtgacgggtaccaga
ggcgtgagccagccctcggagatgttccccgtcctgcctggatctcacctgctactcaaa
aaccctgcactggagtttattaaatatgtctgccaggttttctcactggacgccaacata
gtgaaccaggtgaacaagctgaagagagacctgctgcgcctcgttgacgttggagaattc
tcggaggaagctcagttccacgacccctgtaactcttacgtcctacccgaggtcatctgc
caccagtgcaacttctgtcgcgaccttgacctctgcaaggacccgtctgttgcacaggat
gggtccattgagatggctctggtagaagctctgcagaagaagctgatgagctactcactg
caggacctggtgtgtaacaagtgtaaaggggttaaagaagcaaacatgcccctctactgc
agatgcgctggagactttgacctctctttttcagccaagagcttctctgagcagatcgca
gtgttccggaacatagcgtcccactacaacatgagcttcctggaggagaccattgactgg
ctgcttgagatgagtccacacgtgagccagagcgctcactcaatgtga
DBGET
integrated database retrieval system
