Solea senegalensis (Senegalese sole): 122770006
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Entry
122770006 CDS
T07721
Symbol
ddx31
Name
(RefSeq) probable ATP-dependent RNA helicase DDX31 isoform X1
KO
K14806
ATP-dependent RNA helicase DDX31/DBP7 [EC:
5.6.2.7
]
Organism
ssen
Solea senegalensis (Senegalese sole)
Brite
KEGG Orthology (KO) [BR:
ssen00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ssen01009
]
122770006 (ddx31)
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ssen03009
]
122770006 (ddx31)
Enzymes [BR:
ssen01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
122770006 (ddx31)
Protein phosphatases and associated proteins [BR:
ssen01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
122770006 (ddx31)
Ribosome biogenesis [BR:
ssen03009
]
Eukaryotic type
Pre-60S particles
Helicases
122770006 (ddx31)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
ResIII
ERCC3_RAD25_C
FANCI_S4
Motif
Other DBs
NCBI-GeneID:
122770006
NCBI-ProteinID:
XP_043882888
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All DBs
Position
LG5:19918619..19931680
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AA seq
776 aa
AA seq
DB search
MPVQLLKLTISAFQHLGTNKRSLLRMSTEDNQLCLNISSSLPSSLSAKKKPLSAQQRWAR
KKQRAEKRRNSSTPTEEKSGSFKQRRLQPLDTAEEPGEKIEAPPVPPPIPSEHSQAPPPE
LTGKKKKKETREKDGVKESGRSSIKTSSLFKHNPDIPEIHRPAVSQVKEKIFTSDSFSDL
DLHPHLVVTLNKVLNVSTLTSVQKQTIPVLLSGRDAVVRSQTGSGKTLSYAVPLVQSLQS
VRPKITRSDGPLAVIIVPTRELALQTFQTLQRLLKPFTWIVPGVLMGGEKRKAEKARLRK
GINILISTPGRLVDHIKNTLSIAFSAARWLILDEADRTLDMGFEKDLTIILNSLNSAGPS
RQNVLLSATLTQGVTHLADVCLNDPASIHVSGPASSDLTTVPALISDPSPANQSESFAVP
EALKQFVVVVPSKIRLVCLAAFILDKCQFSQNNKLIVFVSSCESVEFLHSLFTSVLSGPS
ANHKSSFGFMRLHGNMKQEERSDVFQQFSVSQSGVLLCTDVAARGLDLPQVTWIVQYTPP
SATAEYVHRVGRTARIGGKGSSLLFLTPAETAFITELANHNISLSEMKLLDVLSCLMMDD
AYKGRGKYHSKMSSRALEQEIRERATVLQTHFENFVHMDVQSVQNAKKALQSFLRAYTTY
PAHLKHIFHIRSLHLGHTAKSFGLRDAPQGLNSATGSVGPRAKHHKKDQNKNQTKSPEKN
QKKTAEMGRICPSQREVSLFRSEFSSGLDEGGSKKKRRNRKKAFGESGEEEELSAD
NT seq
2331 nt
NT seq
+upstream
nt +downstream
nt
atgccggttcaactactgaagcttacaataagtgcatttcaacatttgggtacaaacaag
agaagcttgttgaggatgtcaacagaagataaccagctgtgtctgaacatcagcagcagt
ttgccttcatctctgtctgctaagaagaaacctctgagtgctcagcagcgatgggccaga
aagaaacagcgagcagagaagaggaggaacagctccacccccacagaggagaagagtggc
tccttcaaacagaggaggctgcagccattggacacagcagaggagccgggcgagaagatc
gaggctcctcctgttcctcctcctattccttctgaacactcccaggcgccaccccctgag
ctgaccgggaagaagaagaaaaaggagacaagggagaaggatggagtgaaggagtcggga
aggagcagcatcaagacctcctctctgttcaaacacaacccagatatacctgagatccac
agaccagctgtttctcaagtgaaggagaagattttcaccagtgattcattttcagatctg
gatctgcacccacacctggtggtgacgctcaacaaagtattgaatgtttccacattaaca
agtgtacagaaacagacgatcccagtccttctgtcaggacgtgacgctgtagttcgctct
cagaccggatcaggaaagacgctctcatacgctgtcccactggtccagagtcttcagtca
gtgcggccgaagatcaccaggtcagatggtcctctggcggtcatcatcgttcccaccaga
gagcttgctctgcagaccttccagaccctccagagacttctgaagccatttacctggatt
gtcccaggtgtcctgatgggaggagagaagaggaaagcagagaaggccaggctccgaaag
ggaattaacatcctgatttcaactcctggacgtctagtggatcatatcaaaaacaccctg
agcatcgccttcagtgccgcacgctggctcattctggacgaggccgacaggacgttggac
atgggttttgagaaggatctgaccatcatattgaatagcctgaacagtgcaggaccgagc
agacagaatgtcctgctttctgctacactgacacaaggtgtgactcacctggccgatgtt
tgtctgaatgaccctgccagcatccatgtgtctggtcccgcctcctctgacctcaccacc
gtcccagctctcatatctgacccaagcccagccaatcagtcagagagctttgcagtacca
gaagccctgaagcagtttgtggtggtggttcccagtaagatcagactggtctgtctggct
gctttcatactggacaaatgtcagttttcacagaacaacaaactcatcgtctttgtctcg
agctgcgagtctgtagagttccttcactctctcttcacctctgtcctctctgggccctct
gccaatcacaagtcttcgtttggcttcatgcgtcttcatggtaacatgaagcaggaggaa
cgatcagatgtgtttcagcagttctctgtttctcagtctggagtcctgctgtgtacggac
gtggcagccagagggctggaccttcctcaggtcacctggattgttcagtacactccccca
tcagcaacggcagagtacgttcaccgtgttggccgaactgctcgtattggaggaaaggga
agcagtctcctcttcctcacccccgctgagactgccttcatcactgagctggccaatcac
aatatcagcctatcagagatgaagctgctggacgtcttgtcctgtctgatgatggacgac
gcctacaaggggcggggcaaataccacagtaagatgtcgtccagagctctggagcaggag
atcagggagcgagcaacagttctgcaaacacactttgagaactttgttcacatggacgtt
cagtcagtgcaaaatgccaagaaagctcttcagtccttcctgcgggcatacaccacatac
cctgctcacctcaaacacatcttccacatacggtccctccacctgggtcacacagccaag
agcttcggcctcagagatgcgccacagggtctgaattccgccacaggctcagtgggcccc
agagccaagcaccacaaaaaagaccagaacaaaaaccagaccaagagtccagagaaaaac
cagaagaagacagcagagatggggaggatttgtcccagtcagagggaggtcagcctgttt
cgctctgaattctccagtgggttggacgaaggaggttccaagaagaagaggagaaatagg
aagaaggcatttggagagtcaggagaagaggaggagctctccgctgactga
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