Solea senegalensis (Senegalese sole): 122770016
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Entry
122770016 CDS
T07721
Symbol
rmi1
Name
(RefSeq) recQ-mediated genome instability protein 1
KO
K10990
RecQ-mediated genome instability protein 1
Organism
ssen
Solea senegalensis (Senegalese sole)
Pathway
ssen03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
ssen00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
122770016 (rmi1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ssen03400
]
122770016 (rmi1)
DNA repair and recombination proteins [BR:
ssen03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Bloom's syndrome complex (BTR)
122770016 (rmi1)
FA (Fanconi anemia) pathway
122770016 (rmi1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RMI1_C
RMI1_N_C
RMI1_N_N
MscS_TM
Motif
Other DBs
NCBI-GeneID:
122770016
NCBI-ProteinID:
XP_043882904
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Position
LG5:9780093..9787843
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AA seq
711 aa
AA seq
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MAPVIQTVVCATQAWLQTSWHVQVPYAWLEACVEWLQEEAGGPGRLSQQQINQQALDQWL
LTDLRDLDCPVLPERLAEALKTKLSGTFCVQVDSFLDISQPAYGQLQKWKGTDCGNDDVS
AVTQTTQRPWEARPTRMLLLQITDGVQSLEAMEYQPIPALSTALRPGAKLQLQGQMVCRL
GMLLLGPSNIKVLGGEVEDLVDRNTQGRVLSRTLGLAEAEEQQQQQQQQEEEEEEEGPPA
PQQVNPGEEDLDLDDAELLASLGAQEEVQRVPVGSVGDSGYGTLGDISTSSLRSVVSTAS
SRSEAAAHSYRSGLTHSSRGGLLQEDPDPIDLLPSDQEIQAEVQDHNMAEEDFPDEDFDD
IPFDELDSVLYRQTTNVTAESVSHRNTRTSGNSGSCDSATKAQTSQFERHASNFSGLRSG
SCNSRSVTPNRDLLGSAKGAHGQLAATTSTLSFSPTASEPSHEPQLISDEETDFMDEDMD
CFLEEVENFGVHPGAQGLRRDIANATKAESSGPSYAPDSSRSVRDGVSISTGHTTPHEQT
SNSADHSKLFAKKDTQSDSTAPVLTLTSPPFTYLCLLEDLKSKPHPRTTEICVKAFIVTL
LGKLISKNNAWSVCATISDGTSYMDVELSDKVLTDLLGFSVAEKASLKRNPARRGELDAG
MRRCQEGLVDMCCLMTIVVEPEGGKAVVTKADQTTEKVLQELEMRARARRR
NT seq
2136 nt
NT seq
+upstream
nt +downstream
nt
atggcccctgtgatccagacagtggtgtgtgccacccaagcctggctgcagacctcctgg
catgtccaggtgccctatgcctggctggaagcctgtgtggagtggctacaagaagaggca
ggtgggccaggtcgtctgtcacagcagcaaattaaccaacaggctctggaccagtggttg
ctgacagatctgagggacctggattgtcctgttctccctgaaagacttgctgaagcactt
aagactaaactcagcggcactttctgtgttcaggttgactcatttctggacatcagtcag
cctgcatatgggcagctacagaaatggaagggcacagactgcggcaacgatgatgtgtcc
gcagtcacgcagaccacccagaggccttgggaagccagaccaacacgtatgctactgctg
cagataacggatggagtccagagcttggaggccatggagtatcagcccatccctgcactc
agcacagccctcaggcctggcgcaaagctgcagttgcagggacaaatggtttgcagactt
gggatgctgctgttggggccttccaatatcaaagtcctgggtggtgaggtggaagaccta
gtggacaggaatacacagggccgggtactgtcccgtacacttggacttgctgaggcggag
gagcagcagcagcagcagcagcagcaggaggaagaagaggaagaagagggaccaccagca
ccacagcaagttaaccctggtgaggaagacctggaccttgatgatgcagagttgttggcc
agtctgggcgcacaagaggaggtgcaaagggttccggtgggttctgttggagacagtggc
tacgggacactgggtgacatctccacttcctctctcaggagtgttgtctccacagcgtca
tccagaagtgaagccgccgcccactcgtacagaagtggtttgacccacagtagcagaggt
ggattgctccaggaggatcctgaccccattgacctcctaccatctgaccaagagattcag
gcagaggtccaagaccacaacatggcagaagaagactttcctgatgaagacttcgacgat
attccttttgatgagttggacagtgtgctctatcggcaaaccacaaatgttaccgcggaa
agtgtcagtcacagaaacaccagaacatcggggaattccggcagttgcgacagcgccaca
aaagcccaaacttcacagtttgagcggcatgcgtcaaatttctcagggttacgttctggt
tcttgcaactccagatctgtcacaccgaacagagaccttttaggcagtgctaaaggagct
catgggcagttagcagccacaacttccacactgtccttttccccaacagcttcagagccg
tcacatgaaccacaactcataagtgatgaggagacagattttatggatgaggacatggac
tgctttcttgaagaggtagaaaactttggtgtgcatcctggagcgcaggggctgaggaga
gacatagcgaacgctaccaaagcagagagttcagggcccagttatgcacctgattcatcg
agatctgtaagagatggggtttctattagcacaggacacacaacacctcatgagcaaact
tcaaacagtgcagaccacagcaaactgtttgctaaaaaggatacacaaagtgacagtaca
gctcctgttctcactctgacctctccaccttttacgtacttgtgtctcctagaggacctg
aagtctaagccacacccccgcaccacagagatctgtgtgaaagcgttcatcgttactctt
ctagggaaactcatcagcaagaacaatgcttggagtgtgtgtgcaacaatatcagatgga
accagttacatggatgtggagctgtcggataaggttttgacggacctgcttggcttctcc
gtggcggagaaggcgtctctgaagcgtaacccagcccggaggggtgagcttgatgcaggg
atgcggagatgtcaggaaggcctggtggacatgtgttgtcttatgaccattgtggttgaa
cccgagggtgggaaagcggttgtgacaaaggcagaccagaccactgagaaagtactgcag
gagctggagatgagggcaagagccaggagaagataa
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