Solea senegalensis (Senegalese sole): 122770052
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Entry
122770052 CDS
T07721
Symbol
tfip11
Name
(RefSeq) tuftelin-interacting protein 11
KO
K13103
tuftelin-interacting protein 11
Organism
ssen
Solea senegalensis (Senegalese sole)
Brite
KEGG Orthology (KO) [BR:
ssen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ssen03041
]
122770052 (tfip11)
Spliceosome [BR:
ssen03041
]
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
122770052 (tfip11)
Other components
Complex C specific factors
122770052 (tfip11)
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Ortholog
Paralog
GFIT
Motif
Pfam:
GCFC
TIP_N
G-patch
G-patch_2
Senescence_reg
Motif
Other DBs
NCBI-GeneID:
122770052
NCBI-ProteinID:
XP_043882949
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Position
LG5:complement(9911818..9916943)
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AA seq
841 aa
AA seq
DB search
MSMSHLYGRRGEEEEQEGVEIESFEVTDWDLANEFNPDRRRFRQSKEQATYGIWAERDSD
EDERPSFGGKKSKDYTLPVNFVSGGLRKSAAEEKQQQKEGDHSGDDYDDDDDAVPPAPIP
PHGTAPKKLQMGNFSRNQTQRFAGGIQSGKGIGNWEKHTKGIGQKLLQKMGYQPGKGLGK
NAQGIVNPIEAKVRKGKGAVGAYGSERTQQSLQDFPVVDSEEEEEKEFQKELGQWRKDPA
GSAGKKKPKYSYKTVDELKAKGKLVGRSTATSAGELAQVKVIDMTGREQKVYYSYSQMTN
KHSVPDEGPPGISTRDQKSSGFGLPELEHNLQLLIDLTEQDILQSARRLQHEKDVVVSLS
HESKALRSRLDAEQDAIQRMEAILELVDRFPSGETAPGEGPTLQECAHIFETLQTDYYEE
YKTMGLADLAVAVVNPLLKEKLRSWDPLKDSAYCLEDIGQWRAILESRDMHSSAPDSNMD
AYHRLLWEVWIPVMRSCVSGWQPRTVGPMVDCVEVWAPILPLWILDHLLEQLILPRLQRE
VDNWNPLTDTVPIHSWIHPWLPLFQSRLEPLYPPIRSKLSSALLRWYPSDTSARLILQPW
KDVFTPGAWEAFMVKNITPKLALCLEELVINPHQQQMEPFHWVMDWEGMMSPSSLVSLLD
KNFFTKWLQVLRLWLSNSPNYEEVTEWYLGWKGMFSEMLLAQPLIKEKFSEALKILNNAV
SSGMGGYMQPGARENIAYLTQTEMRKDLHYEAMQERRDAESVTHRGIGIGTSGQPLFKDL
VQGKADENNIVFMPLMAKRHEGKQLYTFGRIVIYLDRGFVFVQGEKTWVPTSLQSLIDMA
K
NT seq
2526 nt
NT seq
+upstream
nt +downstream
nt
atgtctatgtcccacctttatggacggagaggggaggaagaagagcaggagggagtggag
attgagagcttcgaggtgacagactgggatctggccaacgagttcaacccagaccgtcgc
agattcaggcagtcaaaagagcaggccacctatggcatctgggctgagagagattcagat
gaggatgagaggccaagctttggaggaaagaaatcgaaagactacactcttccagtgaac
tttgtgagtggtggactgcgcaagagcgcagctgaggagaaacagcaacaaaaagaagga
gaccattctggcgatgattatgatgatgatgatgatgccgtgccaccagcccctattcct
cctcatggcactgcacccaaaaaactgcagatgggtaatttcagcaggaaccagacacag
aggtttgcaggaggcatacagtctggaaaaggcatcggtaactgggagaagcacacaaaa
ggaattggacagaaacttcttcagaaaatgggataccagccaggcaaaggcttgggcaaa
aatgcacaaggaattgtcaaccccattgaggcaaaggtccgtaaaggcaagggagcagtg
ggtgcttatggcagtgagcgaacacagcagagtcttcaggattttcctgtggtggactca
gaagaagaagaggaaaaggagtttcagaaggagcttggccagtggcgtaaggatcctgca
gggtctgcaggaaagaagaaacccaagtattcttataaaactgtagatgagctaaaggct
aagggcaaactggtaggacgaagcactgcaacatctgctggagagctagcacaggtcaag
gtgatagatatgactggaagggagcaaaaggtatactacagttacagtcaaatgaccaac
aagcacagtgttcctgatgaaggcccaccaggcatttccaccagggatcagaaatcatct
ggctttggtttgcccgaacttgaacataacctgcagctgctgatagaccttacggagcag
gacatattacagtccgccagacgactgcagcatgaaaaagatgtcgttgtttcactgagc
cacgagtcaaaagcactgcggagcagactggatgcagagcaagatgccattcaaagaatg
gaggccatactggagctggtggaccggtttccttctggggagactgcacctggggaggga
cctaccctgcaggagtgtgcccatatctttgagacattacaaacagactattatgaagaa
tacaagacaatgggattagcagatttggctgtagctgttgttaatccattactcaaagag
aaacttcgttcctgggacccactgaaggacagtgcttattgtctggaagacattggtcag
tggagagcaatccttgaatcaagagacatgcattccagtgctccggattcaaatatggac
gcttaccacaggcttttgtgggaagtgtggatcccagtgatgcggtcatgtgtgtcaggc
tggcagccccgtacagttgggccaatggtagattgtgttgaagtgtgggctcctattctt
cccctgtggattctagatcaccttttggagcagctgatcttaccccggctacagcgagag
gtggacaactggaaccctttaactgacacagtgcccatccactcctggatccacccttgg
ctgcctttgttccaatcacgtttagagcctctgtacccgcccatcaggagcaaactgtcc
agtgcattgctgcggtggtatcccagtgacacctcggcccgcctcatcctgcaaccatgg
aaagatgttttcactccaggtgcatgggaggccttcatggtgaaaaacataaccccaaag
ctagcattgtgtctggaagagttggttatcaaccctcaccagcagcagatggagccattt
cactgggtgatggactgggagggcatgatgtccccatcaagtcttgtgtctctgctcgac
aaaaacttctttacaaagtggttgcaggtcctgcgtttatggctgagcaacagtcccaac
tatgaggaagtcactgaatggtaccttggctggaaaggcatgttcagtgaaatgttgttg
gcacagccactcataaaggagaagttcagtgaagctttgaagatcctgaacaatgcagtg
tcttcaggcatgggtggatatatgcaacccggtgcaagggagaacatcgcatatctcact
cagacagagatgaggaaggacttgcattacgaagcgatgcaggagcgcagagatgcagag
agtgtgactcacaggggcatcggcatcggcactagcggccaaccgctctttaaagatctt
gttcagggcaaggcagatgaaaacaacattgtctttatgcctttaatggccaaacggcat
gagggtaaacagctgtacacatttgggcgcatcgtcatctacttagatagggggtttgtg
tttgtgcaaggagagaagacttgggtgcccacgtctttgcagagtctgattgatatggcc
aagtga
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