Solea senegalensis (Senegalese sole): 122770210
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Entry
122770210 CDS
T07721
Symbol
msi1b
Name
(RefSeq) RNA-binding protein Musashi homolog 1b isoform X1
KO
K14411
RNA-binding protein Musashi
Organism
ssen
Solea senegalensis (Senegalese sole)
Pathway
ssen03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ssen00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
122770210 (msi1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ssen03019
]
122770210 (msi1b)
Messenger RNA biogenesis [BR:
ssen03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
122770210 (msi1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
RRM_PARP14_1
NID
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
122770210
NCBI-ProteinID:
XP_043883168
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Position
LG5:24946456..24969973
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AA seq
351 aa
AA seq
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METEGSQSSLSLSTADSPHDPCKMFIGGLSWQTTQEGLKEYFCKYGEVKECMVMRDPVTK
RSRGFGFVTFVDQAGVDKVLAQTRHELDSKTIDPKVAFPRRAQPKLVTRTKKIFVGGLSV
NTTIEDVKQYFDQFGKVDDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINNKM
VECKKAQPKEVMSPTGSARGRSRVMPYGMDAFMLGIGMLGYPGFQTATYTSRSYAGITPG
YTYQFPEFHLERTPLLTSPHPPELTAIPLTAYGPMAAAAAAAAVVRGSTPSRSAGFLGTS
SPGPMADLYGTAGQESAVSSYLSAASPAPSTGFSHSLGGPLIATAFTNGYH
NT seq
1056 nt
NT seq
+upstream
nt +downstream
nt
atggagacggaagggagccagagcagcctgtccctgtccaccgcggactcccctcacgac
ccctgcaaaatgttcataggtggactgagctggcaaacaacacaagagggtctgaaggag
tacttctgcaagtacggcgaggtgaaggagtgtatggtgatgagggatccggttactaag
cgctcgagaggattcggattcgtcacctttgtcgatcaggctggtgtggataaagttttg
gcccagaccaggcacgagctggactccaaaacaatcgatccgaaggttgcattccctcgc
agagctcagcccaagttggtgactcgaaccaagaagatctttgtaggcggcctgtcagtg
aacacaaccatcgaggatgtcaagcagtactttgaccagtttgggaaggttgacgacgcc
atgctcatgtttgacaagaccaccaacagacacagagggttcggctttgtgacgtttgag
aacgaggacgtagtggagaaagtctgcgagatccacttccacgagatcaacaacaaaatg
gtggagtgtaagaaagctcagcccaaggaggtgatgtcccccacaggctcagccaggggg
cgctctcgggtgatgccctatgggatggacgccttcatgctgggcatcggtatgctgggt
tatcctggcttccagacggccacgtacaccagccggagctacgccggcatcactcctgga
tacacctaccagttccccgagttccacttagagaggactccccttctgacttcaccccac
ccccctgagctcacagccattcctctcacagcatatggaccaatggcggctgcggcggca
gcagcagcagtagtcagaggttctaccccatctcgctcagctggatttttgggtacgagc
agcccgggcccgatggcagacctgtacggaacagcaggtcaggagtcggctgtcagcagt
tacctcagcgctgcaagccccgcccccagcactggattcagtcatagtttggggggccct
ttgatcgccacagccttcactaacggatatcactga
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