Solea senegalensis (Senegalese sole): 122770425
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Entry
122770425 CDS
T07721
Symbol
cnga1a
Name
(RefSeq) LOW QUALITY PROTEIN: cyclic nucleotide gated channel subunit alpha 1a
KO
K04948
cyclic nucleotide gated channel alpha 1
Organism
ssen
Solea senegalensis (Senegalese sole)
Pathway
ssen04744
Phototransduction
Brite
KEGG Orthology (KO) [BR:
ssen00001
]
09150 Organismal Systems
09157 Sensory system
04744 Phototransduction
122770425 (cnga1a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ssen04040
]
122770425 (cnga1a)
Ion channels [BR:
ssen04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
122770425 (cnga1a)
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
CLZ
cNMP_binding
PFF1_TM
NPR3
DUF7813
Motif
Other DBs
NCBI-GeneID:
122770425
NCBI-ProteinID:
XP_043883198
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All DBs
Position
LG6:complement(16058839..16063706)
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AA seq
694 aa
AA seq
DB search
MESAAMSTSTSNPHLTASGSGEHSEHKLSARPPNPHFLNVNNSNSNEEKEKEGKENEEKQ
TKDEEKEKEKEEKEKEKEKEKEKEEKEKEKEKEKEKEKEKEKEKEKEKDKDKDKPKELFV
INPAGSLYYHWLFIITVPVMYNWLMIIARACFEELQHNYIVYWMLLDYTSDLFYLADMLV
RTRTGYLEQGLLVKDEKLLWDRYITSFQFRLDVLSMLPTDIFYFVLGLDYPEIRLNKLLR
ISRMMEFFTRTETKTNYPNIFRIANLILYILIIIHWNACFYFSFSKSIGFGADDWVYPAL
DDPEEPDFGKPMRKYSFSLYWSTLTLTTIGETPPPALDSEFFFHVGDFLVGVLVFATIVG
NIATMISNMNAAQAQFQSRIDNIKQYMQVRKVSKELELRVIDWFDYLWNNGKAQDEREVL
RYLPDKLKAEIAIQVHMDTLKKVRIFADCEAGLLIQLVLKLRPQVFSPADFICKKGDIGR
EMYIIKDGKLAVVADDGVTQFVVLGSGSYFGEISILNIKGSKAGNRRTANIRSVGYSELF
CLSKDDLMESLTEYPDAKAILEEKGREILMKDNLIELDPANIMPETQELEEKVNKLYGTM
ELMQTKLKKILGSYKSADKALKHRIADLEHLTGEEVEEDEDEEEEVKKEEKPDGEKTVEE
GEGDGQKKEGEEEKKEEATDEEGKXEETTEEEKK
NT seq
2085 nt
NT seq
+upstream
nt +downstream
nt
atggaatctgctgctatgtccacttcaaccagcaatcctcacctcactgcctcaggcagc
ggtgagcacagtgagcacaagctaagtgcacgtccaccaaaccctcattttctcaatgtg
aataatagtaacagcaacgaagaaaaggagaaggagggaaaggaaaatgaagagaagcaa
acaaaagacgaagaaaaggaaaaggaaaaagaagagaaggaaaaagaaaaggaaaaggaa
aaggaaaaagaagagaaggaaaaagaaaaggaaaaggaaaaggaaaaagaaaaagaaaaa
gaaaaagaaaaagaaaaagagaaggacaaggacaaagacaagccaaaggaattgttcgtg
attaatcctgccgggagtttgtactaccactggctgttcatcatcacagtaccagtcatg
tacaactggctcatgatcatagccagagcctgcttcgaggagctgcagcataactacatc
gtttactggatgttgttggactacacctcagacctgttctacctggctgatatgctcgtc
agaaccaggacaggttacctcgagcaaggtctattggtgaaagatgagaagctgctgtgg
gatcgttacatcacctccttccagtttcgtctcgatgttctctccatgttgcccactgac
atcttttactttgtcctcggcctcgactaccctgagatacgcctcaacaagctcctgaga
atcagccgcatgatggagttcttcacgaggacagagacgaaaaccaactaccccaacatc
ttccgcatcgcgaacttgatcctgtacatcctcatcatcattcactggaatgcctgtttc
tatttctccttctccaagtctattggcttcggagctgatgactgggtttacccagctctg
gatgatccagaggagccagactttggcaagccaatgagaaagtattcgttcagcctctac
tggtccacactgaccttgactaccattggagaaaccccaccaccagccctggactcagag
tttttcttccatgtgggcgacttcttagttggagtcttggtctttgccacaattgtagga
aacattgccaccatgatatcgaacatgaatgctgcccaagcccagtttcagtcccgaatt
gacaacatcaagcagtatatgcaggttcgaaaggtcagcaaggaacttgagctgcgagtc
attgattggtttgactatctgtggaataatggtaaggcacaggacgaaagagaggtgtta
aggtatcttccagacaagctaaaggctgaaattgctatccaggtccacatggacaccctg
aagaaggttcgtatttttgcagactgtgaggcaggcctgctgatccagttagtgctcaag
ctgcggcctcaagtcttcagcccagcagacttcatctgcaagaagggcgacatcggccgc
gagatgtatattatcaaagatggaaaactcgcagttgttgccgacgacggcgtcacacag
tttgttgtgctgggaagtggcagctattttggtgagatcagtatccttaacattaaaggc
agtaaagcagggaacaggcggacagccaacatccgcagcgttggatactcagaactcttc
tgcctgtccaaggatgacctgatggagtcactgacggagtatccggatgctaaagccata
ctcgaagagaaaggccgggagatcctgatgaaagacaacctgatagagttggaccctgca
aacatcatgcctgagacacaggaactggaggagaaggtcaacaaattgtacggcacaatg
gagctgatgcagaccaagctaaagaagattctgggaagctacaagagcgcagacaaggct
ctgaaacaccgcatcgctgatctggagcatctgacaggagaggaggtggaagaggatgag
gacgaggaggaagaggtgaaaaaggaagagaagcccgatggagagaaaacagtggaagag
ggggagggagatgggcagaaaaaggagggcgaggaggagaagaaggaagaggcaacagat
gaggaaggaaaataagaggaaaccacagaggaagagaaaaaatga
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integrated database retrieval system
