KEGG   Solea senegalensis (Senegalese sole): 122770473
Entry
122770473         CDS       T07721                                 
Symbol
aptx
Name
(RefSeq) aprataxin isoform X1
  KO
K10863  aprataxin [EC:3.6.1.70 3.6.1.71 3.6.1.72]
Organism
ssen  Solea senegalensis (Senegalese sole)
Pathway
ssen03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:ssen00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    122770473 (aptx)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ssen03400]
    122770473 (aptx)
Enzymes [BR:ssen01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.1  In phosphorus-containing anhydrides
    3.6.1.70  guanosine-5'-diphospho-5'-[DNA] diphosphatase
     122770473 (aptx)
    3.6.1.71  adenosine-5'-diphospho-5'-[DNA] diphosphatase
     122770473 (aptx)
    3.6.1.72  DNA-3'-diphospho-5'-guanosine diphosphatase
     122770473 (aptx)
DNA repair and recombination proteins [BR:ssen03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Other BER factors
     122770473 (aptx)
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Other NHEJ factors
     122770473 (aptx)
SSDB
Motif
Pfam: DcpS_C FHA_2 zf-C2HE HIT FHA zf-C2H2_6 zf-C2H2_4
Other DBs
NCBI-GeneID: 122770473
NCBI-ProteinID: XP_043883276
LinkDB
Position
LG6:complement(16134169..16137657)
AA seq 333 aa
MPTCWLVSEEGIHKPILLPHLQTVVLGRCPETTIKDKKCSRQQVELKAECNKGYVKVKQL
GTNPTSVDSVVVGTGNEVRIKPGQRLHIVNQLYPYTIQFKEDPTGKNSGTKRPRESASDD
RESPREAQKMKAAKLTEKVPVLVNHGEAQKHTERGGLWSQGLKISMQDPKMQLYKDDKVV
VIKDKYPKARHHWLVLPWQSIPSLKALCEEHCDLVKHMQQVADQMVQQCPDSSSLSFRTG
YHAIPSMSHVHLHVISQDFDSPCLKNKKHWNSFTTDYFIESNDVIQMLETNGRVTVKEGA
TELLKLPLCCHMCHKELSTIPALKEHLKSHFPR
NT seq 1002 nt   +upstreamnt  +downstreamnt
atgccgacttgctggcttgttagcgaagaggggattcataaaccaattctgctgcctcac
ttacaaacagttgtcctgggtcgatgtccagaaacgactattaaagacaaaaaatgctcc
cggcagcaagttgaattgaaagcagagtgcaacaaaggttatgtcaaagttaaacagctt
ggcacaaatcccacctccgtagactctgtagtggtgggtacaggcaatgaggtcaggata
aagcctggacagcggcttcatattgtcaatcagctctatccatacacaattcagttcaag
gaggatcccactggcaaaaatagtggcaccaaaagacccagagagtcagcctcagatgac
agagagagccctagagaggcacagaaaatgaaagcagccaaactgactgaaaaggtccct
gtgttggtcaaccatggagaagcccagaaacacactgaaagaggtgggctttggagtcaa
ggtttgaaaatttcaatgcaagacccaaagatgcagctatacaaggatgataaagtagta
gtaatcaaagacaaataccccaaagctcgccaccactggctcgtcctgccatggcagtcc
atccccagtctgaaggcactgtgtgaggagcactgtgacttggtcaaacatatgcagcaa
gtggccgatcagatggttcagcagtgccccgattctagctccctcagcttccgcacaggg
taccatgccatcccaagtatgagtcatgtccatctccacgtgatcagccaggacttcgac
tctccttgtttaaagaacaaaaagcactggaactcttttacaactgactatttcattgag
tctaatgatgtcattcagatgcttgaaacaaatggaagggtcacagtaaaagaaggcgcc
actgagttgttgaaacttccactctgctgtcacatgtgtcacaaagagctctccactata
ccggctctgaaggaacatctcaagtctcactttcccagataa

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