Solea senegalensis (Senegalese sole): 122770473
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Entry
122770473 CDS
T07721
Symbol
aptx
Name
(RefSeq) aprataxin isoform X1
KO
K10863
aprataxin [EC:
3.6.1.70
3.6.1.71
3.6.1.72
]
Organism
ssen
Solea senegalensis (Senegalese sole)
Pathway
ssen03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ssen00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
122770473 (aptx)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ssen03400
]
122770473 (aptx)
Enzymes [BR:
ssen01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.1 In phosphorus-containing anhydrides
3.6.1.70 guanosine-5'-diphospho-5'-[DNA] diphosphatase
122770473 (aptx)
3.6.1.71 adenosine-5'-diphospho-5'-[DNA] diphosphatase
122770473 (aptx)
3.6.1.72 DNA-3'-diphospho-5'-guanosine diphosphatase
122770473 (aptx)
DNA repair and recombination proteins [BR:
ssen03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Other BER factors
122770473 (aptx)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Other NHEJ factors
122770473 (aptx)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DcpS_C
FHA_2
zf-C2HE
HIT
FHA
zf-C2H2_6
zf-C2H2_4
Motif
Other DBs
NCBI-GeneID:
122770473
NCBI-ProteinID:
XP_043883276
LinkDB
All DBs
Position
LG6:complement(16134169..16137657)
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AA seq
333 aa
AA seq
DB search
MPTCWLVSEEGIHKPILLPHLQTVVLGRCPETTIKDKKCSRQQVELKAECNKGYVKVKQL
GTNPTSVDSVVVGTGNEVRIKPGQRLHIVNQLYPYTIQFKEDPTGKNSGTKRPRESASDD
RESPREAQKMKAAKLTEKVPVLVNHGEAQKHTERGGLWSQGLKISMQDPKMQLYKDDKVV
VIKDKYPKARHHWLVLPWQSIPSLKALCEEHCDLVKHMQQVADQMVQQCPDSSSLSFRTG
YHAIPSMSHVHLHVISQDFDSPCLKNKKHWNSFTTDYFIESNDVIQMLETNGRVTVKEGA
TELLKLPLCCHMCHKELSTIPALKEHLKSHFPR
NT seq
1002 nt
NT seq
+upstream
nt +downstream
nt
atgccgacttgctggcttgttagcgaagaggggattcataaaccaattctgctgcctcac
ttacaaacagttgtcctgggtcgatgtccagaaacgactattaaagacaaaaaatgctcc
cggcagcaagttgaattgaaagcagagtgcaacaaaggttatgtcaaagttaaacagctt
ggcacaaatcccacctccgtagactctgtagtggtgggtacaggcaatgaggtcaggata
aagcctggacagcggcttcatattgtcaatcagctctatccatacacaattcagttcaag
gaggatcccactggcaaaaatagtggcaccaaaagacccagagagtcagcctcagatgac
agagagagccctagagaggcacagaaaatgaaagcagccaaactgactgaaaaggtccct
gtgttggtcaaccatggagaagcccagaaacacactgaaagaggtgggctttggagtcaa
ggtttgaaaatttcaatgcaagacccaaagatgcagctatacaaggatgataaagtagta
gtaatcaaagacaaataccccaaagctcgccaccactggctcgtcctgccatggcagtcc
atccccagtctgaaggcactgtgtgaggagcactgtgacttggtcaaacatatgcagcaa
gtggccgatcagatggttcagcagtgccccgattctagctccctcagcttccgcacaggg
taccatgccatcccaagtatgagtcatgtccatctccacgtgatcagccaggacttcgac
tctccttgtttaaagaacaaaaagcactggaactcttttacaactgactatttcattgag
tctaatgatgtcattcagatgcttgaaacaaatggaagggtcacagtaaaagaaggcgcc
actgagttgttgaaacttccactctgctgtcacatgtgtcacaaagagctctccactata
ccggctctgaaggaacatctcaagtctcactttcccagataa
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integrated database retrieval system