Solea senegalensis (Senegalese sole): 122770512
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Entry
122770512 CDS
T07721
Symbol
zgc:136908
Name
(RefSeq) transitional endoplasmic reticulum ATPase isoform X1
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
ssen
Solea senegalensis (Senegalese sole)
Pathway
ssen04137
Mitophagy - animal
ssen04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
ssen00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
122770512 (zgc:136908)
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
122770512 (zgc:136908)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ssen03019
]
122770512 (zgc:136908)
03009 Ribosome biogenesis [BR:
ssen03009
]
122770512 (zgc:136908)
04131 Membrane trafficking [BR:
ssen04131
]
122770512 (zgc:136908)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ssen04147
]
122770512 (zgc:136908)
Messenger RNA biogenesis [BR:
ssen03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
122770512 (zgc:136908)
Ribosome biogenesis [BR:
ssen03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
122770512 (zgc:136908)
Membrane trafficking [BR:
ssen04131
]
SNARE
SNARE associated proteins
Others
122770512 (zgc:136908)
Autophagy
Aggrephagy
Other aggrephagy associated proteins
122770512 (zgc:136908)
Exosome [BR:
ssen04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
122770512 (zgc:136908)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
AAA_16
RuvB_N
CDC48_2
AAA_5
AAA_33
AAA_2
AAA_22
TIP49
RNA_helicase
AAA_14
Vps4_C
NPHP3_N
AAA_28
Parvo_NS1
ATPase_2
nSTAND3
Mg_chelatase
AAA_7
DUF815
ATPase
AAA_18
IstB_IS21
NACHT
AAA_17
ABC_tran
AAA_24
TsaE
ResIII
Sigma54_activat
Viral_helicase1
NB-ARC
PhoH
SLFN-g3_helicase
Cytidylate_kin
KAP_NTPase
Zot
AAA_6
Motif
Other DBs
NCBI-GeneID:
122770512
NCBI-ProteinID:
XP_043883342
LinkDB
All DBs
Position
LG6:complement(7927993..7937624)
Genome browser
AA seq
806 aa
AA seq
DB search
MPGSGGADSKGEDFSTAILKQKQRPNRLIVDEVINEDSSIVSLSQNKMEELQLFRGDTVV
LRGRKQRQTVCIVLTDDTCADERIRMNRVTRSNLRVRLGDVISIHACPDIKYGKKIHVLP
IDDTIEGLTGSLFEVFLKPYFLEAYRPVHKGDIFLVRGSMRAVEFKVVETDPSPHCIVAP
DTVIYCEGEPIKREDEEENLNDIGYDDIGGCRKQLAQIKEMVELPLRHPGLFKAIGVKPP
RGILLYGPAGTGKTLVARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAP
AIIFIDELDAIAPKREKTHGEVERRIVSQLLTLMDGLKQRAHVVVMAATNRPNSIDPALR
RFGRFDREIDIGIPDSTGRLEILQIHTKNMKLADDVDLERIAMDTHGHVGADLAALCSEA
ALQAIRKKLILIDLEDESIDADLLNSMAVTMDDFKWALSQSNPSALRETVAEVPQVTWVD
IGGLDEVKRELQELVQYPVEYPDKFLKFGMTPSRGVLFYGPPGCGKTLLAKAIANECQAN
FVSIKGPEMLTMWFGESEANVRDVFDKARQAAPCILFFDELDSIAKSRGGSAGDAGGAAD
RVINQILTEMDGMSDKKNVFIIGATNRPDIIDSAILRPGRLDQLIYIPLPDKPSRTAILN
ANLRKSPVARDVDLEYLSNITDGFSGADLTEICQRACKLAIREAIEAEIKAERQRQNRPG
IPMDEDFDPVPEIRKDHFEEAMRFARRSVSDNDIRKYEMFAQTLQQSRGFGNFRFPSATG
TEGQGSGSGSGRSNLYREEGDDDLYQ
NT seq
2421 nt
NT seq
+upstream
nt +downstream
nt
atgccgggctcaggaggagcagactcaaagggagaggatttctccaccgccatcctaaag
cagaagcagagacccaacagactcatcgtggatgaagtcatcaatgaagacagcagcatt
gtcagcctgtcacagaataagatggaggagctgcagctcttccggggggacacagtggtg
ttgagagggcggaaacaacggcagacagtgtgcatcgtcctaactgacgacacctgtgcg
gatgaacggatccggatgaatcgcgtgacgcgtagtaacctgcgcgtccggcttggtgat
gtcatcagtatccatgcctgccctgatatcaagtatggaaaaaagattcatgttctcccc
atagatgacaccattgaaggcctgactgggagcctcttcgaggttttcctcaaaccgtac
tttctggaggcttaccggcccgtacacaaaggtgacatcttcctggtgagggggagcatg
cgagcagtggagttcaaggtggtggaaacagaccccagccctcactgcatcgtcgcccca
gacactgtcatatactgtgagggagagccaatcaaaagagaggacgaagaggagaaccta
aatgacatcggctacgatgacatcggaggctgtcgaaagcagctggctcagatcaaagag
atggtcgaacttcctctcagacacccgggtctcttcaaggcgataggagttaagcccccc
agaggcatcctgctgtacggccctgcagggacaggaaagaccctggtggcccgcgctgtc
gccaatgaaactggtgccttctttttcctcatcaatgggcctgagatcatgagtaagctg
gcgggagagtcagagagcaacctaagaaaggcgtttgaggaagcggagaaaaacgctcca
gccatcatcttcattgatgagttggatgcaatcgctcccaagagagagaagacccacggt
gaggtagagcggcgtatcgtgtcccagctcctgaccctgatggatggcctaaagcaaaga
gctcatgtggttgtcatggcagcaacaaaccggcctaacagcattgaccctgctctgaga
cgctttggcaggtttgatcgtgagattgacattggaatcccagattcgaccggcagactg
gagatcctgcagatccacaccaaaaacatgaaactggctgatgatgtcgatctagagagg
atcgccatggacacccatggtcatgtgggcgctgacctggcggctctgtgctcagaagct
gctttgcaggccattcgcaagaagttgattctaatagacctggaggatgaatccattgat
gctgacctgctcaactcaatggctgtcacgatggacgacttcaaatgggcgctgagtcag
agcaacccatcagctctgagagagactgttgcagaggttcctcaggtcacttgggtggac
atcggaggactggacgaggtcaagagagagctacaagagcttgttcagtaccctgttgag
tatccggacaaattcctgaagtttgggatgacgccgtccagaggcgtattgttctacggt
cctccgggctgtgggaaaacccttctggctaaagccattgccaatgagtgccaagcaaac
tttgtctccattaaaggtcctgagatgctcaccatgtggtttggagagtcagaggccaat
gtcagggacgtgttcgataaggccagacaggcagcgccgtgcatcttgtttttcgatgaa
ttagactccattgctaaatccagaggcggcagcgctggggacgcaggtggtgcagccgac
agagtcatcaaccagatcctcaccgagatggatggcatgtctgacaaaaagaacgttttc
atcattggtgccacaaacagacctgacatcatagactcagccatcctgagaccgggtcgt
ttggaccagctcatctacatcccactcccagacaaaccgtctcgcaccgccatcctaaac
gccaacctacggaaatctcccgttgcacgtgacgtggatctggagtacctgtccaacatc
acagacggtttctccggagctgacctgacggagatctgccagcgagcctgtaagctggcc
atccgtgaggcgatcgaggctgagatcaaggctgagcgtcagaggcagaacagaccagga
attcccatggatgaggatttcgatccagtccctgagatcagaaaggaccactttgaagag
gcgatgcgatttgcccgtcgctctgtcagtgacaacgacatccgaaaatatgagatgttt
gcacaaactctgcagcagagccgaggttttggaaatttcaggtttccctctgctactggg
actgaaggtcaggggtcaggctctgggtcaggaaggtcaaacctgtacagagaagaaggt
gatgacgatctgtatcagtga
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