Solea senegalensis (Senegalese sole): 122770524
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Entry
122770524 CDS
T07721
Symbol
samd1b
Name
(RefSeq) atherin isoform X1
KO
K26266
sterile alpha motif domain-containing protein 1
Organism
ssen
Solea senegalensis (Senegalese sole)
Brite
KEGG Orthology (KO) [BR:
ssen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ssen03036
]
122770524 (samd1b)
Chromosome and associated proteins [BR:
ssen03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Other PRC associated proteins
122770524 (samd1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SAMD1_SHD
SAMD1_WH
SAM_1
SAM_2
SAM_PNT
Motif
Other DBs
NCBI-GeneID:
122770524
NCBI-ProteinID:
XP_043883361
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Position
LG6:complement(7941430..7947980)
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AA seq
689 aa
AA seq
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MSEPNKYREWILETIDSLRSRKARPDLERICRMVRRRHGSDPDRTRTELEKLIQEQTVLK
VSYKGSISYRNAAKVQRKSRKKSEFTAAGGGGGVGGGAEAARERTKHDHLNNNGDSAHSF
SDQEEAEESEPSPDPHTQTSASTAAKKLKPASSPSSGNGCLCCGATTGCAVGSGCKEEKA
SAARDKRLGERVLGGCPPPSPGLGTSTYHHGDGSRTTPGKDDAVGGGNAPRVSGADSQNK
TCSGSVSSSSSSSSSLPPQQRQTAPHKPKLRVGGGAGTRAAGNHANSNLGDRLVASVRSL
SERSLRGAPAATATAATRGHIKPLGLKEILGYLSSQEQLSEEKLTRGKVKVVMEREVARG
RLRRTRCGNITLPLRGMVVEEAMLKNAPADRLVKSALQDRSTARKFMLSLQQQQQQQQQQ
QQQLPSPSVQEEEHMDTGSEEDERGEKEEEEEAAEREDGDPRSSDEEGGLSPVAMATEPG
LTDIPAEDPEIQAASKQGSPHQQQQQQQHRAKGTDSLIRALSPPVQGASLSQCNGGHLED
SAVLTDPQNQQQRDPINHTSPAFIAMECKTEVGVSSCLLTPTASPGDSGLSEERVINGGV
SSAGFKKSEEASGSPLDWTVSDVVSYFTAAGFPEQAAAFRTQEVDGKSLLLMQRADVLTG
LSIRLGPALKIYEHHVKVLQRTHFEDDVC
NT seq
2070 nt
NT seq
+upstream
nt +downstream
nt
atgtccgagcccaacaagtaccgagagtggatcctggagacaatcgactctctccgctcg
aggaaagcccgtccagacctggagaggatttgtcgaatggtccggagacgacacgggtca
gacccggaccgaaccaggacagaactggaaaaactgattcaagagcagaccgtgctcaaa
gttagctacaagggctccatctcttaccgaaacgcggcgaaggtgcagaggaaaagcaga
aagaagagtgagtttacggcggctggcggcggcggtggcgtcggcggcggcgcggaggca
gcgagggagagaaccaaacacgatcatctgaacaacaacggcgacagtgcgcacagcttc
agcgaccaggaggaggcagaggagtcggagcccagcccagatccccacactcaaacatca
gccagcaccgctgccaagaagctgaagcctgcctccagcccaagtagcggaaacgggtgc
ctctgctgtggcgcaacaacgggctgcgccgtcgggagcggctgtaaagaggagaaagca
agtgcagcgagagacaagagattaggagagcgggttctggggggctgcccgccgcccagt
cccggactggggacaagcacgtaccaccatggcgatggcagcaggacaacgccgggaaaa
gacgatgcagttggcggaggaaacgcgcctcgtgtgtccggagctgacagccagaacaaa
acttgctcagggagcgtcagcagcagcagcagcagcagcagcagcctccctccacagcag
aggcagactgcgccccacaaacccaaacttcgagtcggaggaggggcaggcaccagagca
gcggggaaccacgccaactccaacctgggcgacagactggtggcttctgttcgcagtctg
tccgagaggagcctccgaggggcccccgccgccactgccactgccgcgaccagaggccac
ataaagccactggggctcaaggagattttgggttatttgagcagccaggagcagctgtca
gaggagaagctgacccgcggcaaagtcaaagtggtcatggagagagaggtggcgagaggc
aggctgcgcaggacccgctgtggcaacatcactcttccattgcgggggatggtggtggag
gaggcgatgctgaagaatgcgcccgctgacagacttgtgaagagcgcactgcaggaccgg
agcacggcgaggaagtttatgttgtcactgcagcaacagcagcagcagcaacaacagcag
cagcagcagctgccctccccctctgtccaggaggaagagcatatggacacaggcagtgaa
gaagatgaacggggagagaaagaagaagaagaagaagcagctgagagggaggatggtgat
ccccggagttctgatgaggagggaggactatcaccagtagccatggcaaccgaaccaggg
ctcactgatatacctgcagaagatcctgagattcaggcagcatcaaagcaggggagcccc
caccagcagcagcagcagcagcagcacagagctaaagggacagattctctcatcagggct
ctgtccccacctgtccagggagcttcactgtcacagtgcaacggcggacacctggaggac
agcgctgtcctcaccgatccacagaatcagcagcagcgtgatccaatcaaccacacctcc
ccagccttcatcgctatggagtgtaagacagaggtgggtgtgtcgtcctgcctgctcaca
cccaccgcttccccaggagactccggcctgtctgaagagcgcgtgataaatggaggagtt
agcagtgcagggtttaagaagtctgaggaggccagcggaagcccgctggactggacagtg
tctgatgtggtcagttatttcacagcagcaggtttccctgagcaggcagctgcctttcgg
acccaggaagtcgatggcaagtctcttctcctcatgcagcgcgccgatgtcttgaccggc
ctgtcaatcaggctgggccccgccctcaagatctacgagcatcatgtgaaggtgctgcag
agaacacactttgaggatgacgtctgctaa
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