Solea senegalensis (Senegalese sole): 122770555
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Entry
122770555 CDS
T07721
Symbol
exosc9
Name
(RefSeq) exosome complex component RRP45
KO
K03678
exosome complex component RRP45
Organism
ssen
Solea senegalensis (Senegalese sole)
Pathway
ssen03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ssen00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
122770555 (exosc9)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ssen03019
]
122770555 (exosc9)
Messenger RNA biogenesis [BR:
ssen03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
122770555 (exosc9)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
CCD97-like_C
Nop14
Motif
Other DBs
NCBI-GeneID:
122770555
NCBI-ProteinID:
XP_043883412
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Position
LG6:17478451..17484234
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AA seq
435 aa
AA seq
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MKETPLSNCERDFLLKAIEEKKRLDGRQTYDYRKIKIKFGTDYGCCFVDLGLTRVMAQVS
GELVAPKESRPNEGIMFFNIELSPMAAPTFEQGRQSELSVKLNRQLERCLRNSKCIDTES
LCVVSGEKVWQIRVDVHMLNHDGNLMDAASIAAITALCHFRRPDVSIQGDEVTVYSPEER
DPIPLSIYHMPISVSFSFFQQGTYLLVDPCEREERVMDGLLMIAMNKHREICSIQSSGGI
MLLKEQVMRCSKIASVKVSEITELVVKALENDKKARKAGEKCGFAESLPQERITALKVGK
TPVEVMDVTEQANDIVQKAEVSPQTRVPSPLVPVPGVGQVGQGQQTTWGLEEEEEEEEEE
EEVDEEEESDNSSEQDKKVTKMEEEDSRGDVVEISDSEEEEVVILHPETADKALKNTGSS
FHQKGAAPSKQKRKK
NT seq
1308 nt
NT seq
+upstream
nt +downstream
nt
atgaaggagactcccctgtccaactgtgagcgggactttctgctaaaagccatcgaggag
aagaagcgtctggatggacgacagacctacgactacaggaaaataaagatcaagtttggc
acagactatggatgctgctttgtggatctggggttaaccagggtcatggctcaggtgtcc
ggggaactggtggctccaaaagaaagtcgaccaaatgagggaatcatgttcttcaacatt
gagctgtcgccaatggctgcaccaacgttcgaacagggcagacagtctgagttatcagtg
aagctcaacagacagctggagagatgcttgaggaactccaagtgcattgatacagagtcc
ctttgtgtggtatctggagagaaggtgtggcagatcagagtggacgtacacatgttgaat
cacgatgggaacctgatggatgctgccagcattgccgctattacagctctgtgccatttc
aggcgccccgatgtcagcatccagggagatgaagtcacagtgtacagtccagaggagaga
gaccctattcccctgagtatctaccacatgcccatcagtgtcagcttctctttcttccag
caagggacgtatctgctggtggacccctgtgagcgggaggagcgggtgatggacggtttg
ctgatgatagccatgaacaaacacagagaaatctgctccatccagtcgagcggtggcatc
atgctgctgaaggaacaggttatgagatgcagtaaaattgccagcgtcaaagtgtctgaa
atcacagaactagttgtcaaagccctggaaaatgacaagaaagccaggaaggcgggcgaa
aagtgtggctttgcagaatctcttcctcaggagcgaatcacagctctgaaagtgggcaag
actccagtggaggtgatggatgtgaccgaacaagccaatgacatcgtgcagaaagctgag
gtctcgcctcagaccagagtaccatctccactggtgcctgtccctggtgttgggcaggtg
gggcaggggcagcagaccacctggggcctagaggaggaggaggaagaagaagaggaggag
gaagaggtagacgaagaggaggaaagtgacaacagcagtgaacaggacaaaaaagtaaca
aagatggaagaggaagacagcagaggagatgttgttgaaatatcagacagtgaagaggag
gaagtggtcattcttcacccagagactgctgacaaggctctcaaaaacacaggatccagt
tttcaccagaagggggcagcaccttcaaagcaaaaacggaaaaaatga
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