Solea senegalensis (Senegalese sole): 122770582
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Entry
122770582 CDS
T07721
Symbol
eif4a3
Name
(RefSeq) eukaryotic initiation factor 4A-III
KO
K13025
ATP-dependent RNA helicase [EC:
5.6.2.7
]
Organism
ssen
Solea senegalensis (Senegalese sole)
Pathway
ssen03013
Nucleocytoplasmic transport
ssen03015
mRNA surveillance pathway
ssen03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ssen00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
122770582 (eif4a3)
09122 Translation
03013 Nucleocytoplasmic transport
122770582 (eif4a3)
03015 mRNA surveillance pathway
122770582 (eif4a3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ssen03019
]
122770582 (eif4a3)
03041 Spliceosome [BR:
ssen03041
]
122770582 (eif4a3)
03009 Ribosome biogenesis [BR:
ssen03009
]
122770582 (eif4a3)
03012 Translation factors [BR:
ssen03012
]
122770582 (eif4a3)
Enzymes [BR:
ssen01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
122770582 (eif4a3)
Messenger RNA biogenesis [BR:
ssen03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
122770582 (eif4a3)
mRNA cycle factors
Stress granule specific factors
122770582 (eif4a3)
Spliceosome [BR:
ssen03041
]
Complex C
Other components
EJC/TREX
122770582 (eif4a3)
Ribosome biogenesis [BR:
ssen03009
]
Eukaryotic type
90S particles
Helicases
122770582 (eif4a3)
Translation factors [BR:
ssen03012
]
Eukaryotic type
Initiation factors
eIF-4
122770582 (eif4a3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
AAA_22
Cas3-like_C_2
AAA_30
Flavi_DEAD
TniB
Motif
Other DBs
NCBI-GeneID:
122770582
NCBI-ProteinID:
XP_043883457
LinkDB
All DBs
Position
LG6:26539191..26543310
Genome browser
AA seq
406 aa
AA seq
DB search
MAAAGTQSRKRLLKDEDMTKVEFETSEEVDVTPTFDTMGLREDLLRGIYAYGFEKPSAIQ
QRAIKQIIKGRDVIAQSQSGTGKTATFCVSVLQCLDIQVRETQALILAPTRELAGQIQKV
LLALGDYMNVQCHACIGGTNVGEDIRKLDYGQHVVAGTPGRVFDMIRRRSLRTRAIKMLV
LDEADEMLNKGFKEQIYDVYRYLPPATQVCLISATLPHEILEMTNKFMTDPIRILVKRDE
LTLEGIKQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMREANFTVS
SMHGDMPQKERESIMKEFRSGASRVLISTDVWARGLDVPQVSLIINYDLPNNRELYIHRI
GRSGRYGRKGVAINFVKNDDIRILRDIEQYYSTQIDEMPMNVADLI
NT seq
1221 nt
NT seq
+upstream
nt +downstream
nt
atggctgccgccgggacacagagcaggaagaggctcctgaaggacgaggacatgaccaag
gtggagtttgagaccagcgaggaggtggacgtcacccccacgtttgacaccatgggcctc
cgagaggacctactccgcggcatctacgcttacggctttgagaagccgtcagcgatccag
cagagagccatcaaacagatcatcaaaggcagagacgtcatcgcacagtctcagtctgga
acaggaaagacggccacgttctgtgtgtcagtgctgcagtgtctggacatccaggtgagg
gagacccaggctctgatcctcgctccaaccagagagttggctggacagatccagaaggtg
ctgctcgctcttggtgactacatgaatgtccagtgtcatgcatgcatcggtgggacaaac
gttggagaggacatcaggaagttggactatggtcagcatgtggtggcaggaactcctgga
cgagtgtttgatatgattcgacgcaggagtctgaggaccagagccatcaagatgctggtc
ctggacgaagctgacgagatgctcaacaaagggtttaaggagcagatctacgacgtgtac
cgttacctgcctcctgccacacaggtgtgtctgatcagtgccacgctgccacacgagatc
ctggagatgacaaacaagttcatgaccgacccgatccgcatcctggtcaaacgtgatgag
ttgactcttgaggggatcaaacagttctttgttgctgtggagagggaggagtggaagttt
gacacactgtgtgatctttatgacacgctgaccatcacacaggccgtcatcttctgtaac
accaagagaaaggtggactggctgacagagaagatgagagaagcaaacttcacagtgtca
tcgatgcatggagacatgcctcagaaagagagagagtccatcatgaaggagttcagatca
ggagccagtcgtgtgttgatctccactgatgtgtgggctcgaggtctggacgttcctcag
gtgtcactgatcatcaactatgacctgcccaacaacagagagctctatatccacaggatt
ggtcgatcgggtcgttacggtcgtaagggtgtggccattaactttgtgaagaacgatgac
atcaggatcctgcgagacatcgagcagtattactccacccagatcgacgagatgcccatg
aacgtggctgacctgatctga
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