Solea senegalensis (Senegalese sole): 122770643
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Entry
122770643 CDS
T07721
Symbol
sptbn1
Name
(RefSeq) spectrin beta chain, non-erythrocytic 1 isoform X1
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
ssen
Solea senegalensis (Senegalese sole)
Pathway
ssen04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ssen00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
122770643 (sptbn1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ssen04812
]
122770643 (sptbn1)
Cytoskeleton proteins [BR:
ssen04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
122770643 (sptbn1)
Intermediate filaments
Intermediate filament-binding proteins
122770643 (sptbn1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spectrin
CH
PH_9
PH
CAMSAP_CH
PH_11
FERM_C1_MyoVII
NAPRTase_C
Motif
Other DBs
NCBI-GeneID:
122770643
NCBI-ProteinID:
XP_043883544
LinkDB
All DBs
Position
LG6:26415812..26441121
Genome browser
AA seq
2346 aa
AA seq
DB search
MTTVAADYDHMELQQQYNISNDTVNNRWDDDWDNENSSARLFERSRIKALADEREAVQKK
TFTKWVNSHLSRVSCRITDLYMDLRDGRMLIKLLEVLSGERLPKPTKGRMRIHCLENVDK
ALQFLKEQRVHLENMGSHDIVDGNHRLTLGLIWTIILRFQIQDISVETEDNKEKRSAKDA
LLLWCQMKTAGYPNVNIHNFTTSWRDGMAFNALIHKHRPDLIDFDKLKKSNAHYNLQNAF
NLAEQHLGLTKLLDPEDISVDHPDEKSVITYVVTYYHYFSKMKALKVEGKRIGKVLDNAI
ETEKMIEKYESLASDLLEWIEQTIIILNNRKFANSLLGVQQQLQAFNTYRTVEKPPKFTE
KGNLEVLLFTIQSKMRANNQKVYMPREGKLISDINKAWERLEKAEHERELALRTELIRQE
KLEQLARRFDRKAAMRETWLSENQRLVSQDNFGFDLQAVEAATKKHEAIETDIAAYEERV
QAVVAVARELEVEHYHDIKRVTARKDNVIRLWEYLLELLKARRLRLEMNLGLQRVFQEML
YIMDWMDEMKMLLLSQDYGKHLLGVEDLLQKHALVEADIAIQSDRVKAVTTNATKYSGHD
GGYKPCDPQVIQDRVAHLEFCYQELTQLAADRRARLEESRRLWKFFWEMAEEEGWIREKE
QILSSLEHGKDLTGALRLLSQQRALEDEMSGRAGHLQHTIAEGQSMVEAGHFAAAKIQER
IDDLQAQWVALEQLAAARKKRLEEALALHQFTADADDVDAWTLDALRIVSSGETGHDEFS
TQALVRKHKDAAAEVASYRSAIDSLHEQAACLPKEEAELEEVRGRLAGIEERYKEVCELT
KLRKQALQDALALYKMFSEADACEVWIAEKEQWLNSMEIPERLEDLEVIQHRFESLEPEM
NSQASRVAVVNQIARQLMHNGHPSEKDIKVQQDKLNNRWSQFRDLVDLKKESLNSALGVQ
NYHLDCNETKSWIKEKTKVIESTQELGNDLTGVMALQRKLTGMERDLAAIEDKLSDLRGE
AQRLAEEHPDQAKAITGRLAEITSVWEEMKNTLKNREESLGEARKLQQFLRELDDFQSWL
SRTQTAIASEDMPNTLAEAEKLMAQHEGIKNEIQNYEEDYQKMRDMGEMVTQDQTDAQYM
FLRQRLQALDTGWNELHKMWENRQNLLSQSHAYQLFLRDTKQAEAFLNNQEYVLAHTEMP
ATLEGAEAAIKKQEDFMTTMDANEEKINGVVEAGRRLASDGNINADRIQERVASIDDRHK
KNREAAVELMMRLKDNRDLQKFLQDCQELTLWINEKMLTAQDLTYDEARNLHSKWLKHQA
FMAELQSNKEWLDKIQKDGTLLVSEKPETEAVVTEKLSALHTMWEELESTTQTKAQCLFD
ANKAELFTQSCADLDKWLVGLEGQIQSDDYGKDLTSVNILLKKQQMLEKQVEVRQKEVVE
LQSQVQALGQEVKDTDEVDGRRQVVQNKFQELLEPLRRRRNFLVASREVHQFNRDVEDEI
LWVQERVPVAASTDHGNNLQTVQLLIKKNQTLQREIQGHQPRIDDILERSQSLLQEESSG
ADVIRQRLAQLQELWRQLMEEAELRHGRLQEAHKAQQYYFDAAEAEAWMSEQELYMMSEE
KAKDELSAVTMLKKHQIMEQAVEDYAENVHLLSKTSRGLVTDTHPESERISMRQSQVDKL
YAGLKDLSEERRGKLDERLRLFQLNREVDDLEQWIAEREVVAGSHELGQDYEHVTMLQER
FREFARDTGNIGQERVDGVNRLADELINTGHGDAATVAEWKDGLNEAWADLLELIDTRTQ
ILAASFELHKFYHDAKEILGRIVDKQKKLPEDVGRDQNTVETLQRMHTTFEHDIQALGTQ
VRQLQEDAVRLQSAYAGDKADDIQRRESEVLEAWRGLLEACDGRRLRLLDTSDKFRFFSM
VRDLMLWMDDVIRLIEAQEKPRDVSSVELLMNNHQGIKAEIDARNDSFTACIELGKALLA
RKHFASEAIKEKLLQLTDKRKEMIDKWEDRWEWLRLILEVHQFSRDAGVAEAWLLGQEPY
LSSREMGQSVDEVEKLIKRHEAFEKSAATWEERFSALERLTTMELLEVRRQQEEEERRRK
PPSPEPAPTQQEEPQLHSGATTQNGLVSDQDSPPDAVDDLVNGVAERSSKEASPTPSPTS
GRKSKTSQSSTLPAKTPPSQLEGLLYRKHEWEGHNKKASNRSWHNVYCVINNNQEVAFYK
DSKAAAQGSAYHNETPVSLKEATCDVASEYKKKKHVFKLKAIDGNEYLFQAKDEEEMSTW
IQAVLNAGTDDRSSVQGGDPGTPVSGRAQTLPAAVTLATESSPGKREKDKEKEKEKRFSL
FSKKKQ
NT seq
7041 nt
NT seq
+upstream
nt +downstream
nt
atgacgacggtggcggcagattacgaccacatggagctgcagcagcagtacaacatcagc
aacgacacggtcaacaaccgctgggacgatgactgggacaacgagaacagctcggcgcgc
ctctttgaacgttcacgcatcaaggcgctcgcagatgagcgtgaggcggtccagaagaag
accttcactaagtgggtaaactctcacttgtccagagtttcctgcagaatcactgacctc
tacatggacctgagggacggacggatgctcatcaaactgctggaggttctgtctggcgag
agactgccaaagccgaccaaaggtcgtatgcgtatccactgtctggagaacgtggacaag
gctctgcagttcctgaaggagcagagggttcacctggagaacatggggtcacatgacatc
gtggatggaaaccaccgcctgacactgggcctcatctggaccatcatcctccgcttccag
atccaagacatcagtgtggagacagaagacaacaaagagaagagatcggctaaagacgct
ctgctgctgtggtgtcagatgaagacagcagggtatcccaacgtaaacattcacaacttc
accaccagctggagggacggcatggcgttcaacgccctcatccacaaacacagacctgat
ctgatcgactttgacaaactgaagaaatccaacgctcactacaaccttcagaatgccttc
aacctggcagagcaacacctgggtctcaccaagctgctggacccagaggacatcagtgtg
gatcaccctgatgagaagtccgtcatcacctacgtggtcacttattaccactacttctct
aagatgaaggctctgaaggtggagggcaaacgtatcgggaaggttttggacaacgccata
gagacagagaagatgatagagaagtacgagtctctggcctcagacctactggagtggatt
gaacagaccatcatcatcctcaacaacaggaagttcgccaactctctgctgggcgtccag
cagcagctgcaggccttcaacacttaccgcactgtggagaaaccgccaaagttcacagag
aagggaaacctggaggttctgctcttcaccatccagagcaaaatgagagccaacaaccag
aaggtctacatgccccgagagggaaaactcatctcagacatcaacaaggcctgggagaga
ctggagaaggcggagcatgagcgagagctggctctgaggacagagctgattcgtcaggag
aaactggaacagctggcccgacgcttcgaccgcaaggcagcgatgagagagacgtggctg
agcgaaaaccagcgtttagtgtcgcaggacaacttcggattcgaccttcaggctgtcgaa
gccgccaccaagaagcacgaggccattgagacggacattgcggcgtacgaggagcgtgtc
caggccgtggtcgccgtggcgagggagctggaggtggaacattatcacgacatcaaacgt
gtcactgcaaggaaggacaacgtgatccgactgtgggagtatctgctggagctcctgaag
gcccgcaggctgcggctggagatgaacctggggctgcagagggtcttccaggagatgctc
tacatcatggactggatggacgagatgaagatgctgctgttgtcgcaggattacggtaaa
catctgctgggtgtggaagatctgcttcagaaacacgcgctggtggaggccgacatcgcc
atccagtctgaccgagtgaaggcggtcaccaccaacgccaccaaatactctggccatgac
ggcggctacaaaccctgtgaccctcaggtcatacaggatcgtgtggcccacctggagttc
tgttaccaggagctgacgcagctggctgccgaccgccgcgctcgcctggaggaatcccgt
cgcctctggaagtttttctgggagatggcagaggaggaaggctggatccgagagaaggag
cagatcctgtcctctctggaacatggtaaggacctgacgggggcgctgcgactcctcagc
cagcagcgcgccctagaggatgagatgagtggccgcgccggtcacctccagcacaccatc
gccgagggccaatctatggtggaagccggtcactttgcagccgcgaagattcaggagcga
atcgacgacctgcaggcccagtgggtggcgctggagcagctcgcagccgcgaggaagaaa
cgactggaggaggcgctggccctgcaccagttcacggcagatgcagatgacgtcgacgcc
tggacgctggacgctctgcgcatcgtctccagtggagagacgggccacgatgagttctcc
acccaggctctggtcaggaaacacaaggatgcggcggcagaagtggccagctaccggtca
gccatcgactcgctccacgagcaggccgcctgccttcccaaagaggaggcagagttagag
gaggtgcgcggtcggctggctggcatcgaggagcgttacaaggaggtgtgtgagctgacg
aagctgcggaaacaggcactgcaggatgcactggcactctacaagatgttcagcgaggct
gacgcctgcgaggtgtggatcgccgagaaggagcagtggctgaacagcatggagatccct
gagagactggaggacctggaggtgatccagcacaggtttgaaagtctggagccagagatg
aacagccaggcgtcccgtgtggccgtggtgaaccagattgcccgacagctgatgcacaat
ggtcacccgagcgagaaggacatcaaggttcagcaagacaaactcaacaacagatggagc
cagttccgtgacctggtggacctgaagaaggagtccttgaactcggctctcggtgtacag
aactaccatctcgactgcaacgagaccaagtcctggatcaaagagaagaccaaagtcatt
gagtcgacacaggagctgggaaacgacctcaccggtgtgatggcgctgcagcggaaactc
accggtatggagcgagacttggcagccatcgaggacaaactgagtgacctgcggggtgag
gcccagcgtctggcagaggaacatcctgaccaggccaaggccatcaccggtcgactggct
gagatcacctccgtctgggaggaaatgaagaacacgctgaagaaccgcgaagagtctctg
ggagaggccaggaagctgcagcagttcctgcgcgagctggatgacttccagtcctggctg
tcacgcacgcagaccgccatcgcctcagaggatatgcccaacacgctggccgaggctgag
aagctgatggctcagcatgagggcatcaagaacgagatccagaactatgaggaggactac
cagaagatgagggacatgggtgagatggtgacacaggaccagacggacgctcagtacatg
ttcctgcgacagcggctgcaggcgctcgacaccggctggaacgagctccacaaaatgtgg
gagaaccggcagaacctgctgtcacagtctcacgcctaccagctgttcctgagggacacg
aagcaggccgaggccttcctcaacaaccaggagtacgtactggctcacactgagatgcct
gcaacgctggaaggagccgaggctgccatcaagaagcaggaggacttcatgaccaccatg
gacgccaatgaggagaagatcaacggtgtagtggaggctggccggcgtctggccagcgac
ggcaacatcaacgctgatcgcatccaggagagagtggcctccatcgacgacagacataag
aagaacagggaggcagcagtggagctgatgatgagactgaaggacaacagagatctgcag
aagttcctgcaggactgtcaggagttgactctgtggatcaatgagaagatgctcacagct
caggacctcacgtatgacgaggccaggaacctgcacagcaagtggctgaagcaccaggcc
ttcatggccgagctgcagtccaacaaagagtggctggacaagatccagaaggacggcaca
ctgctggtgtcagagaagccagagacggaggcggtggtaacggagaaactgtcggcgctc
cacaccatgtgggaggagcttgagtcgaccacgcagaccaaagctcagtgtctgtttgac
gccaacaaggcagagctgttcacgcagagctgcgccgacctggacaagtggctcgttggc
ctggagggtcagatccagtcggacgactacggcaaagacctgacctccgtcaacatccta
ctcaagaagcagcagatgctggagaagcaggtggaggtgcgtcagaaggaggtggtggag
ctgcaaagccaggtccaggctctgggtcaagaggtcaaagacaccgacgaggtggacggg
cggagacaggtggtgcagaacaagttccaggagctgctggagccactgaggcgccgcagg
aacttcctggtggcgtcgagagaagttcaccagttcaaccgagatgtggaggacgagatt
ctctgggttcaggagagggttcccgtggctgcgtccactgaccacggtaacaacctgcag
acggtgcagctgctcatcaagaaaaaccagaccctgcagagggaaatccagggacaccag
ccgcgtatcgacgacatcctggagcgcagtcagagcctcctgcaggaggagtcgtctggt
gctgatgtcatccgtcagcgcctggcgcagctgcaggagctgtggcggcagctgatggag
gaggcggagcttcgtcacgggcggcttcaggaggctcacaaggctcagcagtactacttt
gacgccgcagaggccgaggcctggatgagtgagcaggagctgtacatgatgtcagaggag
aaggccaaggacgagctgagcgctgtcaccatgttgaagaaacatcagattatggagcag
gcggtggaagactacgctgagaacgtccacctgctgtccaagaccagcagaggactggtg
acagacacacacccagagagtgagcgtatcagcatgcgccagtctcaggttgataaactt
tacgccggcctgaaggacctgtctgaagagaggcggggcaaactggacgagaggctccgc
ctcttccagttgaaccgcgaggttgatgacctcgagcagtggatcgcagagcgggaggtg
gtggccgggtcacatgagctgggacaggattacgaacatgtgacgatgttgcaagagcgt
ttccgtgaattcgcccgcgacacaggaaacattgggcaggagcgcgtggacggcgtgaac
cgtctggccgacgagctgatcaacacgggacacggtgacgccgccacggtggcagagtgg
aaggacggtctgaacgaggcgtgggccgacctgctggagctcatcgacaccaggacgcag
atccttgccgcctccttcgagctccacaagttctaccacgacgccaaggaaatcctggga
cgcattgtggacaagcagaagaaactcccggaggacgtcggtcgagaccagaacacggtg
gagaccctgcagaggatgcataccaccttcgaacacgacatccaggccctgggaacccag
gtacggcagctgcaggaggacgccgtgcgtctccagtcggcgtacgccggcgacaaagca
gacgacatccagcggcgggagagcgaggtgctggaggcttggcgaggtctgctggaggcg
tgtgacgggcgccggctccgcctcctggacaccagcgataaattccgattcttcagcatg
gtccgagacctgatgctgtggatggacgacgtgatccgactcatcgaggctcaggagaaa
cccagggatgtttcatcagtggagctgctgatgaacaaccatcagggcatcaaagcagag
attgacgctcgtaacgacagcttcaccgcctgcatagagctggggaaggcgctgcttgcc
aggaaacactttgcttctgaggcgatcaaagagaagttgctgcagttgacagacaagagg
aaagagatgattgacaagtgggaggatcgatgggagtggctcagactcatcctggaggtg
catcagttctcgcgggacgcgggtgtggcggaggcgtggcttctgggtcaggagccgtac
ctgtcaagcagagagatgggtcagagcgtggacgaggtggagaagctcatcaaacgccac
gaagccttcgagaagtcggccgccacctgggaggagcgattctctgccctggagaggctt
accacaatggagctgttggaggtgcgccggcagcaggaggaggaggagcgacggaggaag
ccaccatcaccagagccggcaccgactcagcaagaagagcctcagctgcacagcggcgcg
acaactcagaatgggctggtgtcggatcaggactctcctccggacgccgtagacgacctg
gtgaacggcgtggccgagcgaagctccaaggaagcgagtccgacgccgtcgccaacgtcc
ggcaggaagagcaagacaagccagtcgtccacgctgccggccaagacgccgccgtcacag
ctggagggactcctgtaccgcaaacacgagtgggaggggcataacaagaaggcgtccaac
aggtcgtggcacaacgtgtactgcgtcatcaacaacaaccaggaggtggcgttctacaag
gacagcaaggcggcggctcaaggctccgcctaccacaatgagacgcccgtcagcctgaag
gaagccacgtgtgacgtggcgtcagaatacaagaagaagaaacacgtgttcaagctcaag
gcgattgatggcaacgagtatttgtttcaagccaaagacgaagaggagatgagcacctgg
attcaggctgtcctgaacgccggcacagacgaccgctccagtgtccagggcggcgacccc
ggcacgccggtgtctgggcgcgctcagacactgccggccgctgtcacactcgccaccgag
tcgagtcccgggaaacgagagaaggataaagagaaggagaaggagaaacgcttcagtctg
ttcagcaagaagaaacagtag
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integrated database retrieval system
