Solea senegalensis (Senegalese sole): 122770707
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Entry
122770707 CDS
T07721
Symbol
smarca5
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5
KO
K11654
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 [EC:5.6.2.-]
Organism
ssen
Solea senegalensis (Senegalese sole)
Pathway
ssen03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
ssen00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
122770707 (smarca5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ssen03021
]
122770707 (smarca5)
03036 Chromosome and associated proteins [BR:
ssen03036
]
122770707 (smarca5)
Transcription machinery [BR:
ssen03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
NoRC (nucleolar remodeling complex)
122770707 (smarca5)
Chromosome and associated proteins [BR:
ssen03036
]
Eukaryotic type
Chromatin remodeling factors
CHRAC complex
122770707 (smarca5)
RSF complex
122770707 (smarca5)
WICH complex
122770707 (smarca5)
B-WICH complex
122770707 (smarca5)
NORC complex
122770707 (smarca5)
BRF complex
122770707 (smarca5)
NuRF complex (fruit fly)
122770707 (smarca5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
SLIDE
HAND
Helicase_C
ResIII
DEAD
HDA2-3
Myb_DNA-binding
DBINO
AAA_14
Motif
Other DBs
NCBI-GeneID:
122770707
NCBI-ProteinID:
XP_043883667
LinkDB
All DBs
Position
LG6:complement(24518479..24527248)
Genome browser
AA seq
1036 aa
AA seq
DB search
MSESGNCVEQREEQTELEEAGGAEEKSDSSDAGKESSSDAGPDGQDASSSPSSSKTKDSA
PGYEEKVQTDRTNRFEYLLKQTELFAHFIQPAAQKTPTSPLKMKPGRPRIKKDEKQNLLS
AGDNRHRRTEQEEDEELLSESTKTTTVCTRFDDSPSYVKTGKMRDYQVRGLNWLISLYEN
GINGILADEMGLGKTLQTISLLGYMKHYRNIPGPHMVLVPKSTLYNWMNEFKRWVPSLRA
VCLIGDREERTALIRDVLLPGEWDVCVTSYEMLIIEKAVFKKFNWRYLVIDEAHRIKNEK
SKLSEIVREFKTTNRLLLTGTPLQNNLHELWALLNFLLPDVFNSADDFDSWFDTNNCLGD
TKLVERLHTVLRPFLLRRIKADVEKTLLPKREIKMYVGLSKMQREWYTKILMKDIDILNS
AGKMDKMRLLNVLMQLRKCCNHPYLFDGAEPGPPYTTDLHLVVNSGKMVVLDKLLPKMKN
QGSRVLIFSQMTRVLDILEDYCMWRNYGYCRLDGQTPHEERQISINAFNEPNSSKFIFML
STRAGGLGINLATADVVILYDSDWNPQVDLQAMDRAHRIGQQKQVRVFRFITENTVEERI
VERAEMKLRLDSIVIQQGRLVDPSANKLGKDEMLSIIRHGATHVFASKESEITDDDIDAI
LERGERKTKEMKEKLSTLGEGSLRNFTMDTENSSVYTFEGEDYREKKKVITNWIEPPKRE
RKANYAVDAYFREALRVSEPKAPKAPRPPKQPNVQDFQFFPPRLFELLEKEILFYRKTIG
YKVPRNPEMPNSAQMQKEEQAKIDEAQALTEEELEEKENLLQQGFTIWNKRDFNQFIKAN
EKWGRDDIENIAREVEGKTPEEVMEYSAVFWERCNELQDIEKIMAQIERGEARIQRRISI
KKALDSKIGRYKAPFHQLRISYGTNKGKNYTEEEDRFLICMLHKLGFDKESVYDELRQCI
RNSPQFRFDWFLKSRTAMELQRRCNTLITLIERENMELEEREKAEKKKRGPKTSSAQKRK
AEGTAEGRGRKKKLKL
NT seq
3111 nt
NT seq
+upstream
nt +downstream
nt
atgtccgagagtgggaactgcgtggaacagcgggaagagcagactgaacttgaagaagcc
ggaggagcggaggaaaagtcagactcttcagatgctggaaaagagtcctcttcagatgct
ggtcctgatggacaagatgcatcttcctccccatcatcatcaaaaactaaagattctgct
ccaggttatgaggagaaagtgcaaacagatcggaccaaccgatttgagtatctattgaag
caaacagagttgtttgctcatttcatccaacccgccgcacagaagacccccacctctcca
ctgaagatgaaaccaggtcgtccacgaatcaagaaagatgaaaaacaaaacctgctctct
gctggagacaaccgccatcgtcgcacagagcaagaggaggatgaggagcttctcagcgag
agcaccaagactactaccgtttgcactcgttttgatgactctccctcctatgtcaagaca
ggaaagatgagggactatcaggtccgtggtctgaactggctcatctctttgtatgaaaat
ggcatcaatggcatccttgctgatgaaatgggtttgggaaagactctccagactatttcc
ctgctgggttatatgaagcactacagaaatatccctggtcctcacatggtgcttgtgcct
aagtccaccctttacaactggatgaatgagttcaaacgatgggtaccttcccttcgtgcc
gtctgcttgattggagacagagaagagaggactgctctgatcagagatgtgctgctgcca
ggagaatgggacgtatgtgtcacctcctacgaaatgctcatcattgaaaaggccgtgttc
aagaaattcaactggagataccttgttattgatgaggcccacaggataaagaatgaaaag
tcaaagctatcagaaattgtgcgagaattcaagaccaccaatcgtttactgctgactgga
acacctcttcaaaacaacctccatgagctgtgggctctgctgaacttcctgctgcctgat
gtctttaactcagctgatgactttgactcctggtttgacacaaacaactgcttgggtgac
acgaaattggttgaacgtcttcacacggttttgcgtcctttcttgctccgtcgtattaaa
gcagacgtggagaaaactctgctcccaaagagagagatcaaaatgtatgtgggcctgagc
aagatgcagcgagagtggtacacgaagattctgatgaaggacattgacattctgaactca
gccgggaagatggacaagatgcgtctgttgaacgttctcatgcagctcaggaaatgctgc
aaccatccgtacctgtttgacggagccgaacctggtcctccctacacaactgaccttcac
ctggttgtgaacagtggcaagatggtggtgctggataagctgctacccaagatgaagaac
caaggttcccgtgtactcatcttcagtcagatgaccagagtgctggacatattggaagac
tactgcatgtggaggaactatggatactgccgcttggatggtcagacaccacatgaggag
agacagatctctatcaatgcattcaatgagcccaacagctcgaagttcatcttcatgttg
agcaccagagctggtggtctgggtatcaacctggctacagctgatgttgtcatcctctac
gattcagactggaacccccaggtcgaccttcaggccatggaccgagctcacaggattggt
cagcagaagcaggtgcgcgtctttcgcttcatcactgaaaacacagtggaggagaggatt
gtagaaagggctgagatgaaactgcgccttgactccattgtcatccaacaaggaagactc
gtggatccaagcgcaaacaagctggggaaggacgagatgctgtctatcatccgacatggt
gccacgcacgtgtttgcttccaaagagagtgagatcacagatgatgacattgatgctatc
ctggagaggggtgaaaggaagacaaaggagatgaaggagaagctgtctacccttggtgaa
ggctctctgagaaacttcaccatggacacagagaacagcagtgtgtacacatttgaagga
gaagattacagagaaaagaagaaggtcattaccaactggattgagccaccgaagagggag
aggaaagccaattatgctgtggatgcctactttagagaagccctgcgagtcagtgaacca
aaagcacccaaggctcctcgtcctccaaagcagccaaatgttcaagactttcagttcttc
cccccacgtctttttgagcttcttgaaaaagaaattctcttctacagaaagacgataggc
tacaaggttcctcgtaatccggaaatgccaaactctgctcagatgcagaaagaggagcag
gctaagattgacgaggctcaggcgctcacagaggaggaactggaggagaaggagaacctg
ttacagcagggatttaccatttggaacaaacgggacttcaaccagttcatcaaagccaac
gagaagtggggtagagatgacattgagaacattgccagagaagtggagggaaaaaccccc
gaagaagtcatggaatattctgctgtattctgggagcgctgcaacgagctgcaggatatt
gagaagatcatggcccagatagaaagaggcgaggccaggattcaaagaaggattagcatc
aagaaagcactggactcaaagattggtcgctacaaggctcctttccatcagctccgtatt
tcttacggcaccaacaaaggcaagaactacacggaggaagaggaccgcttcctcatctgt
atgcttcacaagctgggcttcgacaaggagagcgtgtatgatgaactgcgtcagtgtatc
cgtaactcaccacagttccgcttcgattggttccttaaatccaggactgccatggagctt
cagaggcgatgcaacacactgattacactgatagagagagagaacatggagctggaagag
agagagaaggcagagaaaaagaaacgaggcccaaagaccagctcggctcagaaaagaaag
gcagagggaaccgcagaaggccgcggacgcaagaaaaaactcaagttgtga
DBGET
integrated database retrieval system
