Solea senegalensis (Senegalese sole): 122770711 Help Entry 122770711         CDS       T07721                                  Symbol tnr Name (RefSeq) tenascin-R isoform X1   KO K06252   tenascin Organism ssen  Solea senegalensis (Senegalese sole) Pathway ssen04510   Focal adhesion ssen04512   ECM-receptor interaction ssen04518   Integrin signaling Brite KEGG Orthology (KO) [BR:ssen00001]  09130 Environmental Information Processing   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     122770711 (tnr)    04518 Integrin signaling     122770711 (tnr)  09140 Cellular Processes   09144 Cellular community - eukaryotes    04510 Focal adhesion     122770711 (tnr)  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    00536 Glycosaminoglycan binding proteins [BR:ssen00536]     122770711 (tnr) Glycosaminoglycan binding proteins [BR:ssen00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    122770711 (tnr) SSDB OrthologParalogGFIT Motif Pfam:  fn3 Fibrinogen_C EGF_TEN EGF_Teneurin FN3_DSCAM-DSCAML_C Fn3_Dep-1_3rd Fn3_PBP1 Pur_ac_phosph_N EGF_Tenascin EGF_2 FN3_Tor_3rd Fn3_Dep-1_2nd Interfer-bind DUF4998 DUF7949 Motif Other DBs NCBI-GeneID:  122770711 NCBI-ProteinID:  XP_043883682 LinkDB All DBs Position LG1:complement(12488787..12640888) Genome browser AA seq 1381 aa AA seqDB search MPLSQQHHRATVPTTGWVLILAIFLALQGAACAAPSGDNKLVRTTRVRRQTLGEDQFASS TNQTLREQPVVFNHVYNINVPLESLCSVDLDTSSPPDGSRAELASKPSVEGPVDPTGPAE YTEQTLDADSQVTFTHRINIPKAACGCAVTATIQQLATRVEMLEREVSLLRAQCGSGCCG ESSAMGRLDFVPGCSGHGSFSFDLCGCICDEGWSGKNCSEPRCPDDCSGQGVCVEGECVC DRDFGGDNCSEPRCPSDCSGRGLCIDGECVCEESFTGEDCMVGRCLNDCSDQGLCVNGTC HCRPGYVGEDCSLVYCANNCSKKGVCKEGFCVCQDGFAGDDCNSVAPVMNLKVRGVTDRT VDLEWEGSVVLTDFLVTYTPSSPRGVQLEMRIPGNTTTCTISGLEAGMEYNINVFAVINN SISVPDSITVWTYLSNPDGLVFKSITETSVEVHWQPFYYSFDGWEISFIPKDNDGGMTAQ LPSTITSYVQTGLRPGEEYTVNLVALRDQGRSQPVTATVTTLIDGPTQLIVRDVSDTVAF VEWSPPKAKIDQVVLRYGLVGGEGPRTTFRLQPTLSQYTLQVLRPGSRYEVSVRGLRKGN ESGSISTEFTTALSFFSEIDAPKNLRLVSKSSTTLELEWDNSEAEVEGYQVVYSTLAGDQ YDKVIVPRNEGATTKTTLTDLLPGTEYGIGISAMKGSKQSTPATMNARTILDVPMDLTVT GSTDNTITLVWGIVQGPIDHYKVTYTSSSGVTTELTVPKDVTTTTLVDLEPGTEYTITVA ARRGRQQSTAATIDAFTGIRPVTHLYLSEVTSDSVSVAWSAPAPPAHFFILSYSSADGTD TSKVTLDGGKTRSLVQGLLPSTHYTVSLITIQGDVTSEPITASLTTAIDPPKEVMVSDVS EDAVTISWIKPLASFEYYKLSYQSAKGRVDSVVIDSDVTNYTLSSLFPATEYEISLNAVR GSQESKVVSTFVFTAMDMPAELTALNITPRGALLRWSPPMSSVDNYVMTLTHNQVTADTV LVEGNKQEHQLSNLKPSTTYSVALYATKGPLTSGTVITNLQTPMDTPLNLTASEVNHRSA LISWQPPIAEIDNYMLTYKSTDGNRKELILDAEDTWIRLEGLAETTEYTVKLQAARGLDT SAVVSTTFTTGSRLFATPQNCAQHLLNGETLSGVYTIYINRDPSQGVQVYCDMTTDEGGW IVFQRRQNGLTDFSRKWSDYRVGFGNLEDEFWLGLDNIQRIAAQGRYELRIDMKDGQESV YANYDKFSIGDARNLYKLRIGEYNGTAGDSLSYHQGRPFSTKDRDNDIAVTNCALSYKGA WWYKNCHRANLNGKYGESRHSQGINWYHWKGHEFSIPFVEMKMRPFNYRSISSKRRRSAP V NT seq 4146 nt NT seq  +upstreamnt  +downstreamnt atgccactctctcagcagcatcacagggccactgtgcccacaactggctgggtcctgatt ctggctattttccttgctctgcagggtgctgcttgtgccgctccatcaggggacaacaag ctggttcgtaccacccgagtgaggagacagaccctgggggaggatcagttcgcttcctcg accaaccagacactgcgggagcaacctgtggtctttaaccacgtctacaacataaacgta cccttagagtctctgtgctccgttgacctggacacatccagtccacctgatgggtcacgt gctgagctggcatccaaaccttctgtggagggtccagtggatccaactggacctgcagaa tacactgagcagactctggatgctgacagccaggtcacgtttactcaccgcatcaacatc ccaaaagctgcatgtggttgtgcagtaacagcgacaatccagcagctggccaccagggta gagatgctcgagagagaagtttccctgcttagagctcagtgtggatcaggatgctgtgga gagagctcagccatgggtcgtttggattttgtcccaggctgcagtggccacggcagcttt agctttgacctgtgcggctgcatctgtgacgaaggctggagtggcaaaaactgctctgag ccccgctgcccggacgactgctccggccagggtgtgtgcgtcgaaggggagtgtgtgtgt gaccgtgactttggaggcgacaactgctcagagccgcggtgcccttcagactgctcgggc cgcgggttgtgtattgacggggagtgcgtgtgtgaggagtccttcactggagaagactgc atggttgggaggtgtctcaatgactgctcggaccaggggctgtgcgtcaatgggacgtgc cattgccgacctggctatgtgggagaagactgctcgctggtgtactgtgccaacaactgc agcaagaaaggagtgtgcaaggaaggcttctgtgtctgccaggatggctttgctggagat gactgcaactctgtggcacctgtcatgaacttaaaggtccgaggtgtgactgatcgcact gttgatctggagtgggaggggtcagtagtgctgacggacttcttggtgacctacacacca agcagccccagaggtgtgcaacttgaaatgaggattccaggcaacaccaccacctgtact atctctggcctagaggcgggcatggagtacaacattaacgtgtttgctgtcataaacaac agtatcagtgtccctgacagcattactgtttggacatatctctctaatccggatggttta gtcttcaaatccatcacagagacgtcagttgaggtccactggcaaccattctactactcc tttgatggatgggagatcagcttcattcccaaggacaatgatggagggatgactgcacag ctgcccagcaccatcacgtcctatgtgcagactggtctaagaccaggagaagagtatacc gttaacttggtggcactccgagaccagggtcgaagtcagccagtgaccgctactgtcaca acattgattgatggccccactcagctgatcgtgcgggatgtgtcagacaccgtggcattt gtggagtggagcccgcctaaagcaaagatcgatcaggtcgtgttgcgttatggccttgtg ggaggtgaggggccacggaccaccttccgcctccagcccacactcagccaatacacactg caggttctgcgtccaggctcccgttacgaggtctctgtcagaggtttaaggaaaggaaat gagagcggatccatttccactgaattcactaccgctttatcattcttctcagaaattgat gcccccaagaacttacggcttgtgtccaagagctctaccaccctcgagctggagtgggat aacagtgaagcggaggtggagggttaccaggtggtgtacagcactttggctggagatcag tatgacaaagtcatcgtaccacgaaatgagggagccaccactaagaccacactcacagac ctgctgccaggcacagagtatggcatcggcatctcagccatgaaaggaagcaagcagagt acaccagcaacaatgaacgccaggaccattctggatgtgcccatggatttaactgtgaca ggctcgacagacaacaccatcactctggtgtggggtattgtccagggccccatcgaccac tacaaggtcacctacacatcctcctctggtgtcactactgagctgacggtgcctaaagat gtaaccaccaccaccctcgtggaccttgagcctgggacggagtacaccatcactgtagcg gcaagaagaggaagacagcagagcactgctgccaccatagatgccttcacaggaatcaga cccgtaactcacctctacttgtcagaggtgacgtcggactcggtgtcggtggcgtggagc gccccagcgccgcctgctcacttcttcatcctgagctacagctctgccgatgggacagac acctctaaggtgactctggacggcggcaaaacaaggtcactagtccaagggctgctgcct tccactcattacaccgtcagtctaatcacaattcagggggacgttacctctgagcctatt acagcatcactcactacagccatagacccaccaaaagaggtgatggtgtcagacgtgagc gaggacgcagtgactatttcctggatcaaaccactggcttcatttgaatactataagctg tcttaccagtcagccaaaggtcgagtggacagcgtggtgattgacagtgacgtgaccaac tacaccctgtccagtctgtttcctgctacagaatatgagatcagtctcaatgctgtcaga gggagtcaagagagcaaagtggtcagcaccttcgtcttcacagcgatggacatgccagct gagttgacggccctcaacatcactcccagaggagccctgctgaggtggagtcctcctatg tccagtgttgacaactacgtcatgaccctcacacacaatcaagtgacagctgataccgtc cttgtggaaggcaacaagcaggagcaccagctgtctaatcttaagccgagcaccacctac tctgtcgccctgtacgccaccaaaggacccctcaccagcggcacagtcatcaccaacctc caaacacccatggacacacccctgaacctgacagccagtgaagtgaatcaccgcagcgct cttatctcctggcaaccaccaatcgcagaaatcgacaactacatgctcacttacaaatcg accgatggcaaccgaaaagagttgatcctggatgcagaggacacttggatccgtctagaa ggactggctgagaccacagagtacacagtcaagctccaggcagcgagaggacttgacacc agtgctgtagtctccaccaccttcactacagggagtcgtctatttgcaacacctcagaat tgtgcccaacacctgctgaatggagagacgctgagtggtgtctacacaatttacatcaac agagaccccagccagggagtgcaggtgtactgtgatatgaccactgatgaaggagggtgg atcgtgttccagcgtcgtcagaatggcctgacagacttttccaggaagtggagtgactac cgggttggctttggaaacttggaggatgagttctggcttggtctggacaacatccagagg attgctgctcagggacgctacgagctgaggattgacatgaaggacggacaagagtcggta tacgccaattatgacaagttctccattggagatgccagaaatctgtacaagctcaggata ggagagtacaacggcactgcaggtgactctctgagctaccaccagggtcgtcccttctct acaaaagacagagacaacgacatcgccgtcactaactgtgccttgtcttacaaaggagct tggtggtacaagaactgccaccgagccaaccttaatggaaaatacggtgaatccagacat agtcagggtatcaactggtaccactggaagggccacgagttctccatcccctttgtagag atgaagatgaggccgttcaactaccgtagcatcagcagcaagaggaggcggtccgctccc gtataa

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