Solea senegalensis (Senegalese sole): 122770718
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Entry
122770718 CDS
T07721
Symbol
nfatc4
Name
(RefSeq) nuclear factor of activated T-cells, cytoplasmic 4
KO
K17334
nuclear factor of activated T-cells, cytoplasmic 4
Organism
ssen
Solea senegalensis (Senegalese sole)
Pathway
ssen04020
Calcium signaling pathway
ssen04148
Efferocytosis
ssen04218
Cellular senescence
ssen04310
Wnt signaling pathway
ssen04625
C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
ssen00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
122770718 (nfatc4)
04020 Calcium signaling pathway
122770718 (nfatc4)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
122770718 (nfatc4)
09143 Cell growth and death
04218 Cellular senescence
122770718 (nfatc4)
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
122770718 (nfatc4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ssen03000
]
122770718 (nfatc4)
Transcription factors [BR:
ssen03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) NF-AT
122770718 (nfatc4)
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GFIT
Motif
Pfam:
RHD_DNA_bind
RHD_dimer
TIG
Motif
Other DBs
NCBI-GeneID:
122770718
NCBI-ProteinID:
XP_043883756
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Position
LG1:complement(4379577..4400021)
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AA seq
907 aa
AA seq
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MGAAPGSGWEEGEFEFKLVFEEDPPPRQDRGPEPVLATEPEINSGPGEESEGAPLRLDSS
AGNSGSSLVTDNHLAATHAAHSISIPSPPPSASQRAGMHSPPPRRAPVREFSGTYESLPA
RSVQVSESRVVECPSIQITTISPEDDPASTTNNYWDMGGGGGWDRERLYLPLLDPFTYRD
RCPGSLSPSPASSPSSRGWLSPASSCDSLLVEEEELNEAAIHFGLSPSSRPTSPGGKKRR
NSPLASPCTSRRGSYSEELQGCNLEGGDSNLQSQAPPGSCELSIPQKTRKTSLEQLSPRE
VDQEQAPGHSSPCPMPEVQQVRREPPPVGMDYLSVPPALAWGRTRANAHSPLFRSNALPP
LDWPLPSQFDPYELRIEVQPRPHHRAHYETEGSRGAVKAVPSGHPVVKLCGYTERKPLSL
QVFVGTADDRSIRPHPFYQIHRVTGKMVGTASHESVQAGTKLLDIPLNPENNMTALIDCA
GILKLRNSDIELRKGETDVGRKNTRVRLVFRTHLPLAPPGRVLALQVASLPIECSQRSAQ
ELPVIESVSLTSCSVEGGEELLLSGTNFLPISRVLFMERGTDGKLQWEEEAHVDRDNSNE
CLLRVRVPAYSDLSVSRPVPVSLYVSNGKRKRSSTHCFKYLPIMFKEEDPLLSRPSVLPL
DRGTVCPVDGQSRMDRGFHMRGDPLADDRGLGFHLPLYPSAYSPPCPTMSYHHEEYCSKP
DAVSEEPGGSRAVLSERHPSFENLELGFTELLPPLYPRGPQPPSPSPSPWLDSPYLSSSP
SPSHSSSLSPFPASSPISTSPLPPMPTSPYPQYTIYPQEVCPSPPSQPSAYQDMCPVPYS
HYDGWDPQGRVVGMGHGLERDAKIQECPLEFTSSVSMHHITFEEVSEYIGEDIQSYQSGS
QMDNLPN
NT seq
2724 nt
NT seq
+upstream
nt +downstream
nt
atgggggccgcgccgggttcgggctgggaggagggcgagttcgagttcaagctggtgttt
gaggaggacccgccgccgcggcaggaccgggggccggagccggtgctcgcgaccgaaccg
gagataaactccggacccggagaggaaagtgagggcgccccgctgcgcctggactcgtcc
gccggcaacagcggcagcagcctggttacagacaaccacttggctgccactcatgcagct
cactcaatcagcatccccagcccgccgccctcagccagtcagcgtgctgggatgcactcc
ccgcctccacgacgggccccagtcagagagttcagtgggacgtacgagagcctgccagcg
cgatcagtgcaggtttcagagtctcgtgtggtcgagtgtccgagcatccagataaccacc
atctcccctgaagacgaccccgcgtccaccaccaacaactactgggacatgggtggtgga
ggtgggtgggaccgtgaacgcctctacctccccctgctggaccctttcacctaccgcgat
cgatgcccaggctccctcagccccagcccggcctccagcccctcctcacgtggctggctc
agccctgcctccagctgtgactccctgctggtcgaggaggaggagctcaacgaggccgcc
atccattttgggctctcgccgtcatcgagacccacctcacctggtggtaaaaaacgcagg
aactctcctctggcctccccctgtacctcacggaggggcagctactcagaggaactgcaa
gggtgcaacctggagggcggagactccaaccttcagtcacaagctccgcctggcagctgt
gagctgagcatcccacagaaaaccagaaagacatccttggaacaattgtctcccagggag
gtggatcaggagcaggctccaggccacagctccccctgccctatgcctgaggtccagcag
gtcaggagagagcctcctcctgtgggcatggactacctctctgtgccccctgctctggcc
tggggcagaacccgagccaacgcccacagccctctgttcaggtctaatgctctgccgcca
ctcgactggccgctgccgtcccagtttgatccgtatgagctgcgtatcgaggtgcagccc
cgcccacaccacagagcccactatgagacagagggcagcagaggagctgtcaaggctgtg
ccttcaggacatcctgtggtcaagctgtgtggatacacggagagaaaaccactctcactt
caggtgtttgttggaacagctgatgacagatccatcaggccgcatcctttctatcagata
cacagggtgacagggaagatggtgggcactgcaagtcatgagagtgttcaggccgggaca
aagctgctggacattcccctcaaccctgagaacaacatgactgcactcattgactgtgct
gggatcctgaagctgaggaactcagacattgaactaaggaaaggggaaacagacgtcggc
aggaaaaacacgcgtgtccgtttggtatttcgtacccacctccccctagcgccccctggc
agggttctggctctgcaggttgcctcgctgcctattgaatgctcccagcgctcggcccag
gagctgcctgtcatcgagtctgtcagcctcacttcctgctctgtggagggcggagaggaa
cttctgctgagtggcaccaacttcctgccaatctccagagtcctcttcatggaaagaggg
acagatggcaaactacagtgggaggaggaggctcatgtggaccgtgacaacagcaacgag
tgtttgctgcgtgtcagagttcccgcctacagtgacctgtctgtcagtcggcctgtgccg
gtcagtctgtacgtctctaatgggaagaggaaaagaagcagcacacactgcttcaagtat
ctccccatcatgtttaaagaggaggaccctctgctgtcccggccctctgtgctgcctctg
gacaggggcactgtgtgtcctgtagacggtcagagcaggatggacagaggcttccatatg
agaggtgaccctctagctgatgatcggggcctgggtttccacttgcccctctacccctcc
gcctactcccctccctgccccactatgagctaccaccacgaggagtactgctccaaaccc
gacgctgtgtctgaggagcccggtggatccagagcagtgttatctgagcgtcaccccagc
ttcgagaacttggagctgggcttcaccgagcttctgccccctctgtacccccgtggcccc
cagcctccctccccctctccttctccatggcttgactcaccctacctgtcctcctcaccc
tccccttctcactcctcctctctcagtccgttcccagccagcagtccaatctcaacctcc
cctctgcctcctatgcccacctccccttacccccagtacactatttatcctcaggaggtg
tgtccctcccctccttcccagcccagtgcctatcaggacatgtgcccagtaccctactcc
cactatgacggctgggaccctcagggaagggtggtgggaatgggacatggtttagagagg
gacgccaagatccaggagtgcccactggagtttaccagctcagtgtctatgcaccacatt
acctttgaagaagtatcagagtacattggagaggacatccagtcttaccagtcaggttca
cagatggacaacctgccaaactga
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